Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 9.2e-113 410.2 205 100.0
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 1.8e-60 236.5 205 57.6
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 2.0e-59 233.0 167 62.3
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 3.8e-58 228.8 192 56.2
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 3.8e-58 228.8 208 54.8
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 8.5e-58 227.6 208 54.8
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 3.2e-57 225.7 166 60.8
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 5.5e-57 224.9 167 59.9
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 1.6e-56 223.4 166 60.2
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 3.6e-56 222.2 167 58.1
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 4.6e-56 221.9 167 59.3
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 6.1e-56 221.5 167 59.3
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 7.9e-56 221.1 167 59.3
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 7.9e-56 221.1 167 58.1
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 1.0e-55 220.7 167 58.7
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 1.0e-55 220.7 167 56.9
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 1.0e-55 220.7 198 51.0
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 1.3e-55 220.3 204 53.9
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 2.3e-55 219.5 199 52.8
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 3.0e-55 219.2 189 57.1
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 3.0e-55 219.2 189 57.1
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 3.0e-55 219.2 189 57.1
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.1e-54 217.2 165 58.8
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 1.5e-54 216.9 165 56.4
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 1.5e-54 216.9 165 55.8
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 2.5e-54 216.1 166 57.8
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 3.3e-54 215.7 166 57.8
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 3.3e-54 215.7 200 52.5
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 4.3e-54 215.3 167 58.1
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 4.3e-54 215.3 166 59.0
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 4.3e-54 215.3 167 58.1
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 5.7e-54 214.9 205 52.2
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 7.4e-54 214.5 166 57.2
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 7.4e-54 214.5 167 59.3
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 9.7e-54 214.2 189 55.0
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.3e-53 213.8 166 62.0
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 1.6e-53 213.4 168 59.5
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 2.2e-53 213.0 189 53.4
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 2.8e-53 212.6 196 52.6
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 2.8e-53 212.6 166 58.4
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.8e-53 212.6 166 58.4
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.8e-53 212.6 166 58.4
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.8e-53 212.6 166 58.4
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.8e-53 212.6 166 58.4
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 2.8e-53 212.6 189 55.0
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 4.8e-53 211.8 166 57.2
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 6.3e-53 211.5 166 57.8
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 6.3e-53 211.5 167 56.9
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 8.2e-53 211.1 165 60.0
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 1.1e-52 210.7 165 55.8
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 1.4e-52 210.3 189 53.4
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 1.4e-52 210.3 167 57.5
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.8e-52 209.9 199 50.8
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.8e-52 209.9 199 50.8
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 1.8e-52 209.9 166 55.4
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 4.1e-52 208.8 189 53.4
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 6.9e-52 208.0 167 57.5
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 1.2e-51 207.2 189 52.9
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 1.2e-51 207.2 165 57.6
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 1.2e-51 207.2 166 61.4
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 2.6e-51 206.1 163 58.3
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 2.6e-51 206.1 167 56.3
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 4.5e-51 205.3 166 59.6
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 5.9e-51 204.9 166 54.2
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 5.9e-51 204.9 201 49.3
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 7.7e-51 204.5 203 52.7
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 7.7e-51 204.5 166 54.8
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 1.3e-50 203.8 166 54.8
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 2.2e-50 203.0 166 55.4
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 2.2e-50 203.0 184 53.8
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 2.2e-50 203.0 189 51.9
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 2.9e-50 202.6 198 49.5
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 2.9e-50 202.6 166 54.8
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 2.9e-50 202.6 199 47.2
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 2.9e-50 202.6 166 54.8
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 3.8e-50 202.2 166 54.8
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 3.8e-50 202.2 166 54.8
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 3.8e-50 202.2 189 51.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 6.5e-50 201.4 166 54.8
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 6.5e-50 201.4 166 54.8
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 6.5e-50 201.4 198 49.5
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 8.5e-50 201.1 184 52.7
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 8.5e-50 201.1 198 50.5
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 8.5e-50 201.1 185 52.4
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 1.1e-49 200.7 166 54.8
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 1.1e-49 200.7 169 56.2
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 1.4e-49 200.3 166 59.6
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 1.4e-49 200.3 166 57.2
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 1.9e-49 199.9 184 52.7
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 1.9e-49 199.9 198 50.0
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 1.9e-49 199.9 166 53.6
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 1.9e-49 199.9 172 57.0
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 1.9e-49 199.9 172 57.0
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 1.9e-49 199.9 172 57.0
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 4.2e-49 198.7 171 56.7
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 4.2e-49 198.7 166 57.2
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 7.2e-49 198.0 190 52.1
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 7.2e-49 198.0 165 55.8
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 7.2e-49 198.0 195 47.7
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 7.2e-49 198.0 166 55.4
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 9.4e-49 197.6 162 56.2
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 1.2e-48 197.2 172 52.9
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 7.9e-48 194.5 204 50.5
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 5.7e-46 188.3 205 46.8
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.2e-45 186.4 196 50.0
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 2.8e-45 186.0 177 53.7
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 6.9e-44 181.4 155 53.5
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 4.5e-43 178.7 142 58.5
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 6.5e-42 174.9 172 54.1
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 8.5e-42 174.5 139 56.8
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 2.8e-37 159.5 125 55.2
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 3.1e-36 156.0 170 45.9
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.0e-31 141.0 98 60.2
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 3.1e-28 129.4 166 42.8
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.2e-27 127.5 112 49.1
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 5.9e-27 125.2 171 40.9
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 1.1e-25 120.9 204 39.2
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 5.7e-22 108.6 137 45.3
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 2.4e-20 103.2 64 62.5
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 1.7e-18 97.1 63 61.9
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 7.2e-17 91.7 102 44.1
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 1.3e-10 70.9 50 58.0
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 6.6e-10 68.6 68 45.6
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 2.1e-08 63.5 67 38.8
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 2.1e-08 63.5 94 41.5
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 1.5e-06 57.4 92 34.8


User provided reference genes

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