Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8346 Chara braunii HOM05D005274 ORTHO05D006485 1.0e-149 533.9 372 100.0
Mapoly0006s0036 Marchantia polymorpha HOM05D005274 ORTHO05D006485 8.4e-56 221.9 186 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2974 Anthoceros agrestis HOM05D005274 ORTHO05D006485 2.3e-45 187.2 212 48.1
Pp3c2_27880 Physcomitrium patens HOM05D005274 ORTHO05D006485 1.4e-42 177.9 219 44.3
TAR381G1230 Trochodendron aralioides HOM05D005274 ORTHO05D006485 1.0e-40 171.8 197 45.7
SalBow6G5022 Salvia bowleyana HOM05D005274 ORTHO05D006485 2.2e-40 170.6 202 44.6
SGA_v2.0_scaffold32G13165 Striga asiatica HOM05D005274 ORTHO05D006485 2.9e-40 170.2 199 44.2
SalBow6G6215 Salvia bowleyana HOM05D005274 ORTHO05D006485 5.0e-40 169.5 202 44.1
Manes.11G112500 Manihot esculenta HOM05D005274 ORTHO05D006485 6.5e-40 169.1 202 43.6
Rhsim08G0038500 Rhododendron simsii HOM05D005274 ORTHO05D006485 6.5e-40 169.1 225 42.2
HanXRQChr07g0200241 Helianthus annuus HOM05D005274 ORTHO05D006485 4.2e-39 166.4 184 45.1
Nn8g40353 Nelumbo nucifera HOM05D005274 ORTHO05D006485 7.2e-39 165.6 179 46.4
SMO347G0017 Selaginella moellendorffii HOM05D005274 ORTHO05D006485 7.2e-39 165.6 179 45.8
Sopen08g003920 Solanum pennellii HOM05D005274 ORTHO05D006485 1.6e-38 164.5 210 42.9
DCAR_022112 Daucus carota HOM05D005274 ORTHO05D006485 2.7e-38 163.7 178 47.2
Oeu020806.2 Olea europaea HOM05D005274 ORTHO05D006485 3.6e-38 163.3 179 46.4
Oeu034171.3 Olea europaea HOM05D005274 ORTHO05D006485 3.6e-38 163.3 177 46.9
Peaxi162Scf00102g01534 Petunia axillaris HOM05D005274 ORTHO05D006485 6.1e-38 162.5 184 44.6
Potri.004G197200 Populus trichocarpa HOM05D005274 ORTHO05D006485 6.1e-38 162.5 202 40.1
Solyc08g008040.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 6.1e-38 162.5 210 42.4
Sabra04G0133600 Salix brachista HOM05D005274 ORTHO05D006485 7.9e-38 162.2 220 38.6
CAN.G792.79 Capsicum annuum HOM05D005274 ORTHO05D006485 1.0e-37 161.8 184 45.1
CSS0033174 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 1.3e-37 161.4 200 45.0
PGSC0003DMG400005779 Solanum tuberosum HOM05D005274 ORTHO05D006485 1.3e-37 161.4 184 45.1
MSTRG.20092 Avicennia marina HOM05D005274 ORTHO05D006485 1.8e-37 161.0 199 41.7
Cc00_g24660 Coffea canephora HOM05D005274 ORTHO05D006485 3.0e-37 160.2 199 43.2
Dinv33272 Davidia involucrata HOM05D005274 ORTHO05D006485 3.0e-37 160.2 203 42.4
Cpa.g.sc70.54 Carica papaya HOM05D005274 ORTHO05D006485 3.9e-37 159.8 185 44.3
ECA238G2078 Erigeron canadensis HOM05D005274 ORTHO05D006485 3.9e-37 159.8 214 41.1
PSO017G0788 Papaver somniferum HOM05D005274 ORTHO05D006485 3.9e-37 159.8 201 40.3
Nitab4.5_0004836g0020 Nicotiana tabacum HOM05D005274 ORTHO05D006485 5.1e-37 159.5 209 42.6
Cc06_g13990 Coffea canephora HOM05D005274 ORTHO05D006485 6.7e-37 159.1 199 42.7
PSO063G1622 Papaver somniferum HOM05D005274 ORTHO05D006485 1.1e-36 158.3 205 40.5
Migut.B00249 Erythranthe guttata HOM05D005274 ORTHO05D006485 1.5e-36 157.9 199 41.2
vmacro18391 Vaccinium macrocarpon HOM05D005274 ORTHO05D006485 1.9e-36 157.5 205 42.0
ATR1136G175 Amborella trichopoda HOM05D005274 ORTHO05D006485 2.5e-36 157.1 194 42.3
Duzib187G0989 Durio zibethinus HOM05D005274 ORTHO05D006485 2.5e-36 157.1 207 41.1
TAR624G0372 Trochodendron aralioides HOM05D005274 ORTHO05D006485 7.4e-36 155.6 180 43.3
Lsat_1_v5_gn_2_86720 Lactuca sativa HOM05D005274 ORTHO05D006485 9.7e-36 155.2 178 43.8
VMungo1309G1271 Vigna mungo HOM05D005274 ORTHO05D006485 9.7e-36 155.2 179 45.8
GSVIVG01032972001 Vitis vinifera HOM05D005274 ORTHO05D006485 9.7e-36 155.2 198 41.9
Nitab4.5_0006090g0030 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.7e-35 154.5 208 41.3
SEGI_17090 Sequoiadendron giganteum HOM05D005274 ORTHO05D006485 1.7e-35 154.5 134 53.7
Thecc.04G049000 Theobroma cacao HOM05D005274 ORTHO05D006485 1.7e-35 154.5 207 43.5
unitig_744.g24245 Utricularia gibba HOM05D005274 ORTHO05D006485 1.7e-35 154.5 211 41.2
TPR.G27812 Trifolium pratense HOM05D005274 ORTHO05D006485 2.2e-35 154.1 221 40.7
Lalb_Chr10g0096401 Lupinus albus HOM05D005274 ORTHO05D006485 2.8e-35 153.7 181 42.5
Phvul.005G158400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 2.8e-35 153.7 180 45.0
Ca_26258_v3 Cicer arietinum L. HOM05D005274 ORTHO05D006485 3.7e-35 153.3 197 40.1
Gohir.D11G068400 Gossypium hirsutum HOM05D005274 ORTHO05D006485 3.7e-35 153.3 206 40.8
Gorai.007G073200 Gossypium raimondii HOM05D005274 ORTHO05D006485 3.7e-35 153.3 206 40.8
THA.LOC104802536 Tarenaya hassleriana HOM05D005274 ORTHO05D006485 3.7e-35 153.3 185 41.1
Eucgr.I01592 Eucalyptus grandis HOM05D005274 ORTHO05D006485 6.3e-35 152.5 205 40.0
QL02p069234 Quercus lobata HOM05D005274 ORTHO05D006485 8.2e-35 152.1 186 41.4
Cfa007146 Carpinus fangiana HOM05D005274 ORTHO05D006485 1.4e-34 151.4 200 41.0
Sc14g0002660 Simmondsia chinensis HOM05D005274 ORTHO05D006485 1.4e-34 151.4 182 42.9
Glyma.14G044800 Glycine max HOM05D005274 ORTHO05D006485 2.4e-34 150.6 194 41.8
Sp4g16830 Schrenkiella parvula HOM05D005274 ORTHO05D006485 2.4e-34 150.6 185 41.6
Gohir.A11G064100 Gossypium hirsutum HOM05D005274 ORTHO05D006485 3.1e-34 150.2 206 40.3
PGSC0003DMG400011003 Solanum tuberosum HOM05D005274 ORTHO05D006485 3.1e-34 150.2 219 40.6
A03p19190 Brassica napus HOM05D005274 ORTHO05D006485 6.9e-34 149.1 198 41.9
BraA03t11174Z Brassica rapa HOM05D005274 ORTHO05D006485 6.9e-34 149.1 198 41.9
ClCG01G008500 Citrullus lanatus HOM05D005274 ORTHO05D006485 6.9e-34 149.1 179 41.3
Ciclev10016162m.g Citrus clementina HOM05D005274 ORTHO05D006485 6.9e-34 149.1 202 38.6
Medtr2g097630 Medicago truncatula HOM05D005274 ORTHO05D006485 6.9e-34 149.1 220 39.1
BcaB01g06368 Brassica carinata HOM05D005274 ORTHO05D006485 9.1e-34 148.7 209 40.7
Os02g0468200 Oryza sativa ssp. japonica HOM05D005274 ORTHO05D006485 9.1e-34 148.7 202 41.1
Psat2g056880 Pisum sativum HOM05D005274 ORTHO05D006485 9.1e-34 148.7 205 39.5
Sed0000255 Sechium edule HOM05D005274 ORTHO05D006485 9.1e-34 148.7 208 37.0
Glyma.02G271800 Glycine max HOM05D005274 ORTHO05D006485 1.2e-33 148.3 179 44.1
Atru.chr6.2707 Acer truncatum HOM05D005274 ORTHO05D006485 1.5e-33 147.9 200 39.5
Lj9A368G50 Lonicera japonica HOM05D005274 ORTHO05D006485 2.0e-33 147.5 206 41.3
C03p22390 Brassica napus HOM05D005274 ORTHO05D006485 2.6e-33 147.1 199 41.7
Carub.0004s1624 Capsella rubella HOM05D005274 ORTHO05D006485 2.6e-33 147.1 185 40.5
AUR62017870 Chenopodium quinoa HOM05D005274 ORTHO05D006485 2.6e-33 147.1 180 43.9
MELO3C005096.2 Cucumis melo HOM05D005274 ORTHO05D006485 3.4e-33 146.7 179 41.3
AL4G30540 Arabidopsis lyrata HOM05D005274 ORTHO05D006485 4.5e-33 146.4 185 40.0
AUR62009346 Chenopodium quinoa HOM05D005274 ORTHO05D006485 5.9e-33 146.0 180 43.3
AT2G34570 Arabidopsis thaliana HOM05D005274 ORTHO05D006485 7.7e-33 145.6 185 39.5
CsaV3_5G024970 Cucumis sativus L. HOM05D005274 ORTHO05D006485 7.7e-33 145.6 197 38.6
Thhalv10017887m.g Eutrema salsugineum HOM05D005274 ORTHO05D006485 7.7e-33 145.6 185 40.5
Medtr5g071380 Medicago truncatula HOM05D005274 ORTHO05D006485 7.7e-33 145.6 220 38.2
Hund29750 Selenicereus undatus HOM05D005274 ORTHO05D006485 7.7e-33 145.6 180 43.3
Hund29752 Selenicereus undatus HOM05D005274 ORTHO05D006485 7.7e-33 145.6 180 43.3
BcaC01g05789 Brassica carinata HOM05D005274 ORTHO05D006485 1.0e-32 145.2 199 39.7
BolC3t14622H Brassica oleracea HOM05D005274 ORTHO05D006485 1.0e-32 145.2 199 39.7
Hma1.2p1_0474F.1_g160740 Hydrangea macrophylla HOM05D005274 ORTHO05D006485 1.0e-32 145.2 194 41.8
PGR142G3427 Punica granatum HOM05D005274 ORTHO05D006485 1.3e-32 144.8 216 40.3
LjContig00564g0024425 Lotus japonicus HOM05D005274 ORTHO05D006485 1.7e-32 144.4 194 40.2
CARHR128660 Cardamine hirsuta HOM05D005274 ORTHO05D006485 2.9e-32 143.7 209 37.3
Zm00001eb319780 Zea mays HOM05D005274 ORTHO05D006485 2.9e-32 143.7 202 38.6
CiPaw.04G000800 Carya illinoinensis HOM05D005274 ORTHO05D006485 5.0e-32 142.9 200 37.5
arahy.Tifrunner.gnm1.ann1.5GP605 Arachis hypogaea HOM05D005274 ORTHO05D006485 4.2e-31 139.8 181 40.3
arahy.Tifrunner.gnm1.ann1.T7P6Q4 Arachis hypogaea HOM05D005274 ORTHO05D006485 1.2e-30 138.3 181 39.8
Aqoxy5G02491 Aquilegia oxysepala HOM05D005274 ORTHO05D006485 2.1e-30 137.5 179 41.3
RcHm_v2.0_Chr6g0267991 Rosa chinensis HOM05D005274 ORTHO05D006485 2.7e-30 137.1 189 38.6
FAN27G1266 Fragaria x ananassa HOM05D005274 ORTHO05D006485 7.9e-30 135.6 189 38.1
FAN24G2993 Fragaria x ananassa HOM05D005274 ORTHO05D006485 1.0e-29 135.2 189 38.1
MD09G1264600 Malus domestica HOM05D005274 ORTHO05D006485 1.4e-29 134.8 218 36.7
EL10Ac6g13414 Beta vulgaris HOM05D005274 ORTHO05D006485 1.8e-29 134.4 224 36.2
Potri.009G159400 Populus trichocarpa HOM05D005274 ORTHO05D006485 3.0e-29 133.7 166 41.0
CANSAT54G1155 Cannabis sativa HOM05D005274 ORTHO05D006485 3.9e-29 133.3 178 38.8
FvH4_2g10500 Fragaria vesca HOM05D005274 ORTHO05D006485 3.9e-29 133.3 226 35.8
FAN15G2064 Fragaria x ananassa HOM05D005274 ORTHO05D006485 2.0e-28 131.0 226 35.4
Aa31LG10G6820 Aethionema arabicum HOM05D005274 ORTHO05D006485 7.4e-28 129.0 241 32.4
BcaC02g11519 Brassica carinata HOM05D005274 ORTHO05D006485 1.7e-27 127.9 189 39.2
Prupe.5G024800 Prunus persica HOM05D005274 ORTHO05D006485 4.8e-27 126.3 209 34.9
Sopen10g034190 Solanum pennellii HOM05D005274 ORTHO05D006485 4.8e-27 126.3 197 40.1
MD08G1181300 Malus domestica HOM05D005274 ORTHO05D006485 8.2e-27 125.6 185 36.2
SHI31386 Sapria himalayana HOM05D005274 ORTHO05D006485 1.1e-26 125.2 187 33.7
BolC4t23029H Brassica oleracea HOM05D005274 ORTHO05D006485 1.4e-26 124.8 137 45.3
SHI33526 Sapria himalayana HOM05D005274 ORTHO05D006485 1.8e-26 124.4 179 34.6
TWI32G1102 Tripterygium wilfordii HOM05D005274 ORTHO05D006485 4.1e-26 123.2 235 32.8
MD16G1246600 Malus domestica HOM05D005274 ORTHO05D006485 1.5e-25 121.3 189 36.5
Cre11.g480800 Chlamydomonas reinhardtii HOM05D005274 ORTHO05D006485 1.3e-24 118.2 211 32.2
HPP92_002470 Vanilla planifolia HOM05D005274 ORTHO05D006485 2.2e-24 117.5 138 42.8
Ah.10g032810 Amaranthus hybridus HOM05D005274 ORTHO05D006485 5.0e-24 116.3 202 36.1
AUR62037816 Chenopodium quinoa HOM05D005274 ORTHO05D006485 6.5e-24 115.9 179 37.4
MCO15G315 Micromonas commoda HOM05D005274 ORTHO05D006485 7.2e-23 112.5 216 32.9
Cc00_g27920 Coffea canephora HOM05D005274 ORTHO05D006485 4.7e-22 109.8 155 40.0
Solyc10g084740.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 6.7e-21 105.9 248 31.5
PRCOL_00002591 Prasinoderma coloniale HOM05D005274 ORTHO05D006485 7.4e-20 102.4 217 35.0
Actinidia19548 Actinidia chinensis HOM05D005274 ORTHO05D006485 2.2e-19 100.9 107 44.9
COL.COLO4_13388 Corchorus olitorius HOM05D005274 ORTHO05D006485 6.3e-19 99.4 197 33.5
C04p14460 Brassica napus HOM05D005274 ORTHO05D006485 1.6e-14 84.7 139 36.0
Nitab4.5_0000568g0280 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.6e-14 84.7 225 29.3
Cc00_g29040 Coffea canephora HOM05D005274 ORTHO05D006485 1.3e-11 75.1 87 44.8
Phvul.005G025400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 1.7e-11 74.7 128 33.6
Cfa022755 Carpinus fangiana HOM05D005274 ORTHO05D006485 7.7e-09 65.9 132 27.3
CDE04G1865 Ceratophyllum demersum HOM05D000386 ORTHO05D000406 1.3e-08 65.1 66 47.0
Pp3c11_12810 Physcomitrium patens HOM05D004276 ORTHO05D005126 3.2e-07 60.5 143 29.4
FAN06G3034 Fragaria x ananassa HOM05D004276 ORTHO05D005126 5.5e-07 59.7 153 26.8
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 5.5e-07 59.7 65 38.5
Actinidia20176 Actinidia chinensis HOM05D004276 ORTHO05D005126 7.2e-07 59.3 132 31.1
CSS0045220 Camellia sinensis var. sinensis HOM05D004276 ORTHO05D005126 7.2e-07 59.3 132 31.1
Pp3c7_15560 Physcomitrium patens HOM05D004276 ORTHO05D005126 7.2e-07 59.3 143 28.7
GSVIVG01026915001 Vitis vinifera HOM05D004276 ORTHO05D005126 7.2e-07 59.3 132 31.1
GSVIVG01027024001 Vitis vinifera HOM05D004276 ORTHO05D005126 7.2e-07 59.3 132 31.1
PSO302G0143 Papaver somniferum HOM05D004276 ORTHO05D005126 1.2e-06 58.5 130 30.8
PSO384G3706 Papaver somniferum HOM05D004276 ORTHO05D005126 1.2e-06 58.5 130 30.8
Aqoxy7G00185 Aquilegia oxysepala HOM05D004276 ORTHO05D005126 1.6e-06 58.2 130 30.0
Cfa003820 Carpinus fangiana HOM05D004276 ORTHO05D005126 1.6e-06 58.2 132 30.3
DCAR_017055 Daucus carota HOM05D004276 ORTHO05D005126 1.6e-06 58.2 132 29.5
Nn5g30298 Nelumbo nucifera HOM05D004276 ORTHO05D005126 1.6e-06 58.2 130 30.0
PSO135G0697 Papaver somniferum HOM05D004276 ORTHO05D005126 1.6e-06 58.2 130 30.0
PSO210G0614 Papaver somniferum HOM05D004276 ORTHO05D005126 1.6e-06 58.2 130 30.8
Psat3g005280 Pisum sativum HOM05D004276 ORTHO05D005126 1.6e-06 58.2 133 31.6
SMO117G0002 Selaginella moellendorffii HOM05D004276 ORTHO05D005126 1.6e-06 58.2 143 28.7
TAR374G1118 Trochodendron aralioides HOM05D004276 ORTHO05D005126 1.6e-06 58.2 151 27.8
TAR375G0154 Trochodendron aralioides HOM05D004276 ORTHO05D005126 1.6e-06 58.2 151 27.8
EL10Ac1g00335 Beta vulgaris HOM05D004276 ORTHO05D005126 2.1e-06 57.8 130 30.0
Medtr6g086290 Medicago truncatula HOM05D004276 ORTHO05D005126 2.1e-06 57.8 132 30.3
Nitab4.5_0000305g0280 Nicotiana tabacum HOM05D004276 ORTHO05D005126 2.1e-06 57.8 130 30.8
Prupe.2G181300 Prunus persica HOM05D004276 ORTHO05D005126 2.1e-06 57.8 143 28.7
PGR031G2222 Punica granatum HOM05D004276 ORTHO05D005126 2.1e-06 57.8 145 29.0
FAN06G0043 Fragaria x ananassa HOM05D004276 ORTHO05D005126 2.7e-06 57.4 130 28.5
MBI06_g29321_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 2.7e-06 57.4 130 30.0
MD01G1073500 Malus domestica HOM05D004276 ORTHO05D005126 2.7e-06 57.4 143 29.4
Medtr7g116720 Medicago truncatula HOM05D004276 ORTHO05D005126 2.7e-06 57.4 132 30.3
Peaxi162Scf01254g00021 Petunia axillaris HOM05D004276 ORTHO05D005126 2.7e-06 57.4 130 30.8
CANSAT78G1628 Cannabis sativa HOM05D004276 ORTHO05D005126 3.6e-06 57.0 130 30.8
Sed0018576 Sechium edule HOM05D004276 ORTHO05D005126 3.6e-06 57.0 132 28.0
Sc23g0002430 Simmondsia chinensis HOM05D004276 ORTHO05D005126 3.6e-06 57.0 130 30.0
Eucgr.E00082 Eucalyptus grandis HOM05D004276 ORTHO05D005126 4.7e-06 56.6 143 28.0
Rhsim01G0168500 Rhododendron simsii HOM05D004276 ORTHO05D005126 4.7e-06 56.6 130 30.0
Rhsim11G0144600 Rhododendron simsii HOM05D004276 ORTHO05D005126 4.7e-06 56.6 130 30.0
RcHm_v2.0_Chr1g0358391 Rosa chinensis HOM05D004276 ORTHO05D005126 4.7e-06 56.6 143 28.7
CiPaw.01G069700 Carya illinoinensis HOM05D004276 ORTHO05D005126 6.1e-06 56.2 132 29.5
AUR62004429 Chenopodium quinoa HOM05D004276 ORTHO05D005126 6.1e-06 56.2 130 29.2
AUR62022636 Chenopodium quinoa HOM05D004276 ORTHO05D005126 6.1e-06 56.2 130 29.2
CsaV3_3G040290 Cucumis sativus L. HOM05D004276 ORTHO05D005126 6.1e-06 56.2 132 28.8
Migut.B01814 Erythranthe guttata HOM05D004276 ORTHO05D005126 6.1e-06 56.2 130 29.2
Migut.N01579 Erythranthe guttata HOM05D004276 ORTHO05D005126 6.1e-06 56.2 130 29.2
ClCG10G016120 Citrullus lanatus HOM05D004276 ORTHO05D005126 8.0e-06 55.8 132 28.0
MELO3C009766.2 Cucumis melo HOM05D004276 ORTHO05D005126 8.0e-06 55.8 132 28.0
SalBow1G3478 Salvia bowleyana HOM05D004276 ORTHO05D005126 8.0e-06 55.8 132 29.5
SEGI_17768 Sequoiadendron giganteum HOM05D004276 ORTHO05D005126 8.0e-06 55.8 143 28.0


User provided reference genes

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