Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 4.2e-263 911.0 517 100.0
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 3.3e-34 150.6 124 61.3
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 9.6e-34 149.1 192 44.8
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.6e-33 148.3 127 58.3
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 2.1e-33 147.9 127 59.8
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 6.2e-33 146.4 143 54.5
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 8.2e-33 146.0 132 57.6
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 8.2e-33 146.0 121 60.3
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 8.2e-33 146.0 121 60.3
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-32 145.6 127 57.5
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-32 145.6 127 57.5
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.4e-32 145.2 143 54.5
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.8e-32 144.8 195 46.2
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.8e-32 144.8 127 57.5
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 2.4e-32 144.4 121 61.2
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 2.4e-32 144.4 121 60.3
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 3.1e-32 144.1 127 56.7
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 3.1e-32 144.1 121 59.5
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 3.1e-32 144.1 121 60.3
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 5.3e-32 143.3 121 58.7
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 5.3e-32 143.3 121 59.5
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 5.3e-32 143.3 137 53.3
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 6.9e-32 142.9 136 56.6
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 6.9e-32 142.9 121 59.5
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 9.0e-32 142.5 121 58.7
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 9.0e-32 142.5 130 54.6
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 1.2e-31 142.1 136 52.9
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.2e-31 142.1 121 58.7
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 1.2e-31 142.1 119 58.8
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 1.5e-31 141.7 185 42.2
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 2.0e-31 141.4 142 52.8
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 2.0e-31 141.4 121 59.5
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 5.8e-31 139.8 125 55.2
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 5.8e-31 139.8 121 56.2
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 7.6e-31 139.4 127 55.1
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 1.0e-30 139.0 127 55.1
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.7e-30 138.3 127 54.3
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.7e-30 138.3 127 54.3
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 1.7e-30 138.3 134 56.0
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 2.9e-30 137.5 115 57.4
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 2.9e-30 137.5 121 55.4
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 3.8e-30 137.1 126 54.8
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 4.9e-30 136.7 131 50.4
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 6.5e-30 136.3 115 62.6
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 6.5e-30 136.3 127 53.5
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 8.4e-30 136.0 132 52.3
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 1.1e-29 135.6 115 59.1
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.1e-29 135.6 121 54.5
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.1e-29 135.6 127 52.8
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.4e-29 135.2 131 55.7
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.4e-29 135.2 128 54.7
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.4e-29 135.2 128 54.7
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 1.4e-29 135.2 127 54.3
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 1.9e-29 134.8 126 54.8
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.9e-29 134.8 121 57.9
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.9e-29 134.8 121 57.9
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 1.9e-29 134.8 115 57.4
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.9e-29 134.8 162 48.1
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.5e-29 134.4 127 52.8
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 3.2e-29 134.0 127 52.8
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 3.2e-29 134.0 143 50.3
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 4.2e-29 133.7 127 52.8
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.2e-29 133.7 121 57.0
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 4.2e-29 133.7 177 42.4
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 4.2e-29 133.7 121 56.2
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 7.1e-29 132.9 126 52.4
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 9.3e-29 132.5 121 57.0
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 9.3e-29 132.5 121 54.5
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 1.2e-28 132.1 158 46.8
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 2.7e-28 131.0 127 51.2
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.5e-28 130.6 116 55.2
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 3.5e-28 130.6 127 50.4
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 3.0e-27 127.5 124 51.6
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.9e-26 124.8 147 46.3
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 2.5e-26 124.4 115 53.9
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 1.3e-25 122.1 95 58.9
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 3.7e-25 120.6 127 49.6
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 2.4e-24 117.9 121 51.2
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 3.1e-24 117.5 94 57.4
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 9.0e-24 115.9 86 61.6
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.5e-23 115.2 143 45.5
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.5e-23 115.2 81 65.4
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 2.9e-22 110.9 95 58.9
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 7.2e-21 106.3 92 59.8
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 4.6e-20 103.6 68 67.6
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 2.3e-19 101.3 68 66.2
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 6.7e-19 99.8 121 47.1
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.7e-17 95.1 121 43.8
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 2.2e-17 94.7 134 43.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-16 92.4 94 52.1
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.5e-15 88.6 121 43.8
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.5e-15 88.6 83 56.6
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.0e-14 85.9 178 37.1
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 8.5e-14 82.8 101 46.5
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 5.1e-11 73.6 115 40.0
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.7e-11 73.2 83 49.4
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 5.7e-10 70.1 77 48.1
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 4.8e-09 67.0 39 76.9
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 8.2e-09 66.2 42 66.7
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.4e-08 65.5 121 38.8
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.1e-08 64.3 127 35.4
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 2.0e-07 61.6 92 40.2
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.5e-07 60.8 53 58.5
CBR_g20118 Chara braunii HOM05D009116 ORTHO05D011299 7.7e-07 59.7 217 25.8
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 7.7e-07 59.7 130 32.3
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 1.3e-06 58.9 129 28.7
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 1.3e-06 58.9 123 29.3
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 6.5e-06 56.6 129 27.1
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 6.5e-06 56.6 132 30.3
Pp3c5_14710 Physcomitrium patens HOM05D009116 ORTHO05D011299 6.5e-06 56.6 137 29.2
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 8.5e-06 56.2 129 25.6


User provided reference genes

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