Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 1.0e-93 346.7 165 100.0
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 5.8e-17 91.7 79 51.9
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 9.9e-17 90.9 100 40.0
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 3.2e-15 85.9 108 43.5
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 5.5e-15 85.1 94 43.6
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 7.1e-15 84.7 94 43.6
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 1.6e-14 83.6 80 48.8
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 1.6e-14 83.6 110 39.1
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 2.1e-14 83.2 106 42.5
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 2.1e-14 83.2 95 44.2
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 2.1e-14 83.2 90 43.3
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 2.1e-14 83.2 79 48.1
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 2.7e-14 82.8 96 44.8
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.5e-14 82.4 106 40.6
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 3.5e-14 82.4 95 44.2
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 3.5e-14 82.4 97 42.3
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 1.0e-13 80.9 101 41.6
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 1.0e-13 80.9 86 44.2
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 1.3e-13 80.5 87 44.8
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.3e-13 80.5 80 48.8
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 1.8e-13 80.1 82 45.1
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 1.8e-13 80.1 111 39.6
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 2.3e-13 79.7 118 38.1
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 2.3e-13 79.7 94 43.6
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 2.3e-13 79.7 80 47.5
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 3.0e-13 79.3 87 47.1
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 3.9e-13 79.0 92 41.3
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 5.1e-13 78.6 92 40.2
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 6.7e-13 78.2 95 44.2
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 6.7e-13 78.2 81 45.7
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 6.7e-13 78.2 77 48.1
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 8.7e-13 77.8 82 46.3
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 8.7e-13 77.8 77 46.8
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 8.7e-13 77.8 80 46.2
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 8.7e-13 77.8 109 36.7
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 8.7e-13 77.8 80 46.2
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.1e-12 77.4 135 35.6
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 1.1e-12 77.4 77 46.8
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 1.1e-12 77.4 83 44.6
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 1.1e-12 77.4 82 43.9
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 1.5e-12 77.0 76 46.1
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 1.5e-12 77.0 92 41.3
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.5e-12 77.0 76 48.7
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 1.5e-12 77.0 83 44.6
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 1.5e-12 77.0 85 42.4
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 1.5e-12 77.0 109 36.7
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 1.9e-12 76.6 88 43.2
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.9e-12 76.6 135 35.6
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 1.9e-12 76.6 83 44.6
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 1.9e-12 76.6 83 44.6
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 1.9e-12 76.6 83 44.6
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 1.9e-12 76.6 85 43.5
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 1.9e-12 76.6 109 36.7
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 1.9e-12 76.6 87 43.7
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 2.5e-12 76.3 98 36.7
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 3.3e-12 75.9 109 37.6
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.3e-12 75.9 76 48.7
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 4.3e-12 75.5 79 45.6
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 5.6e-12 75.1 77 49.4
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 5.6e-12 75.1 77 49.4
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 5.6e-12 75.1 83 43.4
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 5.6e-12 75.1 85 44.7
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 7.4e-12 74.7 80 43.8
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 7.4e-12 74.7 76 50.0
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 9.6e-12 74.3 98 37.8
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 9.6e-12 74.3 94 40.4
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 9.6e-12 74.3 85 41.2
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.3e-11 73.9 98 37.8
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 1.3e-11 73.9 85 40.0
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 1.3e-11 73.9 100 41.0
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 1.3e-11 73.9 90 41.1
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 1.3e-11 73.9 88 42.0
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 1.6e-11 73.6 92 39.1
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 2.1e-11 73.2 99 37.4
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 2.1e-11 73.2 85 40.0
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 2.8e-11 72.8 83 42.2
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 2.8e-11 72.8 101 38.6
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 2.8e-11 72.8 76 43.4
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 2.8e-11 72.8 75 48.0
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 2.8e-11 72.8 77 45.5
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 3.7e-11 72.4 85 40.0
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 3.7e-11 72.4 88 40.9
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 3.7e-11 72.4 80 45.0
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 3.7e-11 72.4 77 42.9
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 3.7e-11 72.4 78 44.9
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 4.8e-11 72.0 75 44.0
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 4.8e-11 72.0 79 43.0
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 4.8e-11 72.0 76 46.1
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 4.8e-11 72.0 75 45.3
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 6.2e-11 71.6 75 44.0
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 6.2e-11 71.6 76 47.4
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 8.1e-11 71.2 85 38.8
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 8.1e-11 71.2 85 38.8
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 1.1e-10 70.9 85 38.8
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 1.1e-10 70.9 76 43.4
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 1.1e-10 70.9 77 44.2
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 1.4e-10 70.5 80 40.0
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 1.4e-10 70.5 76 46.1
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.4e-10 70.5 82 43.9
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 3.1e-10 69.3 76 44.7
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 3.1e-10 69.3 76 44.7
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 3.1e-10 69.3 76 44.7
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 3.1e-10 69.3 75 44.0
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.0e-10 68.9 81 43.2
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 4.0e-10 68.9 76 44.7
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 4.0e-10 68.9 76 42.1
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 5.3e-10 68.6 76 43.4
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 9.0e-10 67.8 82 40.2
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.2e-09 67.4 94 40.4
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 1.5e-09 67.0 76 42.1
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 2.0e-09 66.6 76 42.1
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 2.6e-09 66.2 56 50.0
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 4.5e-09 65.5 93 38.7
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 4.5e-09 65.5 130 35.4
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 5.8e-09 65.1 75 41.3
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 5.8e-09 65.1 75 41.3
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 1.0e-08 64.3 54 50.0
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 1.7e-08 63.5 55 47.3
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 2.2e-08 63.2 70 42.9
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 1.4e-07 60.5 50 48.0
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 2.5e-07 59.7 78 34.6


User provided reference genes

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