Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 2.8e-215 751.9 449 100.0
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 1.2e-64 251.5 205 60.0
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 1.2e-59 235.0 207 56.0
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.5e-59 234.6 203 56.7
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 2.9e-58 230.3 209 54.1
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 4.9e-58 229.6 210 55.2
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 4.9e-58 229.6 202 56.4
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 8.3e-58 228.8 202 56.4
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.1e-57 228.4 202 55.0
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 5.4e-57 226.1 208 54.3
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 5.4e-57 226.1 209 54.1
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 5.4e-57 226.1 209 54.1
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 9.2e-57 225.3 205 54.6
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 1.2e-56 224.9 202 55.4
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.2e-56 224.9 202 55.4
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 1.2e-56 224.9 209 53.6
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.6e-56 224.6 205 55.1
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 1.6e-56 224.6 206 54.4
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 2.0e-56 224.2 205 54.6
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 2.0e-56 224.2 206 52.9
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.0e-56 224.2 209 54.5
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.7e-56 223.8 209 53.1
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 3.5e-56 223.4 209 54.1
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 6.0e-56 222.6 202 55.4
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 7.8e-56 222.2 205 53.2
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 7.8e-56 222.2 205 54.1
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 7.8e-56 222.2 209 51.2
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 1.0e-55 221.9 206 52.9
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.3e-55 221.5 205 53.7
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 1.3e-55 221.5 205 53.7
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 1.3e-55 221.5 205 53.2
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.7e-55 221.1 205 53.7
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.7e-55 221.1 209 52.6
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 1.7e-55 221.1 202 55.0
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 3.0e-55 220.3 202 55.0
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 3.0e-55 220.3 205 53.7
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 3.9e-55 219.9 202 54.5
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 3.9e-55 219.9 211 53.1
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 5.0e-55 219.5 205 53.7
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 5.0e-55 219.5 206 52.4
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 6.6e-55 219.2 223 50.7
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 6.6e-55 219.2 220 50.9
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 6.6e-55 219.2 202 54.5
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 6.6e-55 219.2 202 54.5
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 6.6e-55 219.2 205 53.2
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 1.1e-54 218.4 198 53.5
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 1.1e-54 218.4 202 54.0
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.1e-54 218.4 209 52.6
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 1.1e-54 218.4 213 51.6
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 1.5e-54 218.0 202 54.0
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.9e-54 217.6 202 53.5
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 2.5e-54 217.2 206 52.4
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 2.5e-54 217.2 209 50.2
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 3.3e-54 216.9 202 54.0
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.3e-54 216.9 202 54.5
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 4.3e-54 216.5 209 52.6
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 4.3e-54 216.5 209 52.2
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 5.6e-54 216.1 209 52.2
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 5.6e-54 216.1 204 53.4
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 7.3e-54 215.7 206 52.9
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 7.3e-54 215.7 205 53.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 9.5e-54 215.3 202 54.0
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 1.2e-53 214.9 205 52.2
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 1.2e-53 214.9 204 52.9
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 1.6e-53 214.5 213 52.1
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 2.1e-53 214.2 207 54.1
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 2.8e-53 213.8 206 52.4
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 3.1e-52 210.3 196 53.1
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 4.0e-52 209.9 230 49.6
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 5.2e-52 209.5 211 51.7
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 5.2e-52 209.5 206 51.5
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 8.9e-52 208.8 205 51.2
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 3.4e-51 206.8 202 52.5
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 4.4e-51 206.5 199 52.3
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 1.3e-50 204.9 195 53.8
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.3e-50 204.9 188 53.2
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 4.9e-50 203.0 181 53.6
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 8.3e-50 202.2 198 52.0
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.1e-49 201.8 203 50.7
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 4.1e-49 199.9 209 49.3
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 4.6e-48 196.4 238 45.4
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 3.3e-46 190.3 188 51.1
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 5.6e-46 189.5 202 48.5
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 1.2e-45 188.3 209 47.4
CBR_g8217 Chara braunii HOM05D006169 ORTHO05D007698 3.6e-45 186.8 437 35.9
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 3.6e-45 186.8 215 47.9
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 3.6e-45 186.8 213 45.5
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 8.1e-45 185.7 164 56.1
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 8.1e-45 185.7 209 47.8
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 2.3e-44 184.1 205 47.8
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 3.1e-44 183.7 206 47.1
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 4.0e-44 183.3 199 49.2
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.6e-43 180.6 170 53.5
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 2.2e-42 177.6 209 45.9
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 6.4e-42 176.0 196 48.5
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.1e-41 175.3 195 47.2
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 3.2e-41 173.7 187 50.8
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 4.1e-41 173.3 179 50.8
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 9.2e-41 172.2 128 62.5
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.2e-40 171.8 119 65.5
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 2.7e-40 170.6 161 52.8
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 7.8e-40 169.1 119 63.9
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 3.0e-39 167.2 195 43.6
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 5.1e-39 166.4 237 40.1
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 1.2e-37 161.8 119 61.3
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.1e-37 161.0 227 40.1
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 2.4e-33 147.5 185 44.9
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 2.1e-32 144.4 195 42.1
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 2.3e-31 141.0 103 64.1
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.1e-28 132.1 157 45.9
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.4e-25 121.7 80 67.5
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 2.4e-25 120.9 81 67.9
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 6.0e-24 116.3 133 46.6
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-23 114.8 76 68.4
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 1.8e-20 104.8 204 38.7
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 2.1e-16 91.3 66 62.1
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.5e-16 90.5 58 70.7
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 3.5e-16 90.5 132 31.8
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 6.7e-15 86.3 109 41.3
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.2e-11 75.5 131 36.6
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 4.2e-09 67.0 64 51.6
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-07 62.0 45 57.8
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 1.8e-07 61.6 45 57.8


User provided reference genes

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