Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8050 Chara braunii HOM05D000737 ORTHO05D134426 2.2e-70 268.9 137 100.0
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 8.8e-11 70.9 58 53.4
Oeu013354.1 Olea europaea HOM05D000737 ORTHO05D000581 1.3e-09 67.0 60 56.7
BcaC01g02836 Brassica carinata HOM05D000737 ORTHO05D000581 1.1e-08 63.9 60 50.0
A06p32630 Brassica napus HOM05D000737 ORTHO05D000581 1.1e-08 63.9 60 50.0
C03p59900 Brassica napus HOM05D000737 ORTHO05D000581 1.1e-08 63.9 60 50.0
BolC3t18255H Brassica oleracea HOM05D000737 ORTHO05D000581 1.1e-08 63.9 60 50.0
BraA06t26191Z Brassica rapa HOM05D000737 ORTHO05D000581 1.1e-08 63.9 60 50.0
THA.LOC104798373 Tarenaya hassleriana HOM05D000737 ORTHO05D000581 1.4e-08 63.5 60 50.0
Aa31LG1G16310 Aethionema arabicum HOM05D000737 ORTHO05D000581 2.4e-08 62.8 56 50.0
Cre13.g567650 Chlamydomonas reinhardtii HOM05D000737 ORTHO05D000581 2.4e-08 62.8 56 48.2
Thhalv10003988m.g Eutrema salsugineum HOM05D000737 ORTHO05D000581 2.4e-08 62.8 60 48.3
Cc07_g07530 Coffea canephora HOM05D000737 ORTHO05D000581 3.1e-08 62.4 60 51.7
Eucgr.H02342 Eucalyptus grandis HOM05D000737 ORTHO05D000581 3.1e-08 62.4 56 51.8
Manes.13G107500 Manihot esculenta HOM05D000737 ORTHO05D000581 3.1e-08 62.4 60 48.3
Sp2g28860 Schrenkiella parvula HOM05D000737 ORTHO05D000581 3.1e-08 62.4 60 48.3
Actinidia11952 Actinidia chinensis HOM05D000737 ORTHO05D000581 4.1e-08 62.0 60 48.3
vmacro05372 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 4.1e-08 62.0 60 51.7
AL8G43480 Arabidopsis lyrata HOM05D000737 ORTHO05D000581 5.4e-08 61.6 56 50.0
AT5G65760 Arabidopsis thaliana HOM05D000737 ORTHO05D000581 7.0e-08 61.2 56 50.0
CARHR279760 Cardamine hirsuta HOM05D000737 ORTHO05D000581 7.0e-08 61.2 56 48.2
Lj4A168T52 Lonicera japonica HOM05D000737 ORTHO05D000581 7.0e-08 61.2 60 50.0
Sabra07G0006300 Salix brachista HOM05D000737 ORTHO05D000581 7.0e-08 61.2 56 50.0
PGSC0003DMG400021399 Solanum tuberosum HOM05D000737 ORTHO05D000581 7.0e-08 61.2 56 55.4
MSTRG.3488 Avicennia marina HOM05D000737 ORTHO05D000581 9.1e-08 60.8 56 57.1
Cpa.g.sc129.56 Carica papaya HOM05D000737 ORTHO05D000581 1.6e-07 60.1 60 46.7
Aqoxy6G02969 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 2.0e-07 59.7 60 45.0
CAN.G1343.21 Capsicum annuum HOM05D000737 ORTHO05D000581 2.0e-07 59.7 60 50.0
Nitab4.5_0002390g0020 Nicotiana tabacum HOM05D000737 ORTHO05D000581 2.0e-07 59.7 60 50.0
Solyc02g091950.4 Solanum lycopersicum HOM05D000737 ORTHO05D000581 2.0e-07 59.7 56 53.6
Carub.0008s2666 Capsella rubella HOM05D000737 ORTHO05D000581 2.7e-07 59.3 56 46.4
Hma1.2p1_0424F.1_g150310 Hydrangea macrophylla HOM05D000737 ORTHO05D000581 2.7e-07 59.3 60 46.7
SalBow5G0724 Salvia bowleyana HOM05D000737 ORTHO05D000581 2.7e-07 59.3 60 48.3
SalBow5G3124 Salvia bowleyana HOM05D000737 ORTHO05D000581 2.7e-07 59.3 60 48.3
GSVIVG01007429001 Vitis vinifera HOM05D000737 ORTHO05D000581 2.7e-07 59.3 60 43.3
MBI16_g05019_MAGBIO Magnolia biondii HOM05D000737 ORTHO05D000581 3.5e-07 58.9 61 47.5
Peaxi162Scf00096g01721 Petunia axillaris HOM05D000737 ORTHO05D000581 3.5e-07 58.9 60 46.7
Pp3c1_1290 Physcomitrium patens HOM05D000737 ORTHO05D000581 3.5e-07 58.9 57 47.4
DCAR_010790 Daucus carota HOM05D000737 ORTHO05D000581 4.5e-07 58.5 57 49.1
Dinv26971 Davidia involucrata HOM05D000737 ORTHO05D000581 4.5e-07 58.5 56 48.2
Oeu008368.2 Olea europaea HOM05D000737 ORTHO05D000581 4.5e-07 58.5 54 51.9
Phvul.003G232100 Phaseolus vulgaris HOM05D000737 ORTHO05D000581 4.5e-07 58.5 60 41.7
Ah.03g139510 Amaranthus hybridus HOM05D001034 ORTHO05D000955 5.9e-07 58.2 69 42.0
Mapoly0087s0023 Marchantia polymorpha HOM05D000737 ORTHO05D000581 5.9e-07 58.2 57 54.4
Potri.007G008100 Populus trichocarpa HOM05D000737 ORTHO05D000581 5.9e-07 58.2 60 45.0
SGA_v2.0_scaffold30G12405 Striga asiatica HOM05D000737 ORTHO05D000581 5.9e-07 58.2 61 45.9
arahy.Tifrunner.gnm1.ann1.60363P Arachis hypogaea HOM05D000737 ORTHO05D000581 7.7e-07 57.8 60 45.0
PGR102G1034 Punica granatum HOM05D000737 ORTHO05D000581 7.7e-07 57.8 60 48.3
unitig_22.g5656 Utricularia gibba HOM05D000737 ORTHO05D000581 7.7e-07 57.8 53 52.8
VMungo0251G2549 Vigna mungo HOM05D000737 ORTHO05D000581 7.7e-07 57.8 60 41.7
Zm00001eb370240 Zea mays HOM05D000737 ORTHO05D000581 1.0e-06 57.4 60 46.7
CSS0044015 Camellia sinensis var. sinensis HOM05D000737 ORTHO05D000581 1.3e-06 57.0 59 49.2
Nitab4.5_0003478g0040 Nicotiana tabacum HOM05D000737 ORTHO05D000581 1.3e-06 57.0 60 46.7
Sopen02g036520 Solanum pennellii HOM05D000737 ORTHO05D000581 1.3e-06 57.0 56 51.8
TWI74G0803 Tripterygium wilfordii HOM05D000737 ORTHO05D000581 1.3e-06 57.0 60 43.3
CANSAT35G1239 Cannabis sativa HOM05D000737 ORTHO05D000581 1.7e-06 56.6 60 41.7
FAN28G2667 Fragaria x ananassa HOM05D000737 ORTHO05D000581 1.7e-06 56.6 60 46.7
SMO361G0226 Selaginella moellendorffii HOM05D000737 ORTHO05D000581 1.7e-06 56.6 53 50.9
Hund16592 Selenicereus undatus HOM05D000737 ORTHO05D000581 1.7e-06 56.6 60 45.0
unitig_22.g5655 Utricularia gibba HOM05D000737 ORTHO05D000581 1.7e-06 56.6 53 50.9
Ciclev10030021m.g Citrus clementina HOM05D000737 ORTHO05D000581 2.3e-06 56.2 54 48.1
FAN23G3128 Fragaria x ananassa HOM05D000737 ORTHO05D000581 2.3e-06 56.2 60 46.7
EL10Ac6g14946 Beta vulgaris HOM05D000737 ORTHO05D000581 2.9e-06 55.8 53 45.3
AUR62003154 Chenopodium quinoa HOM05D000737 ORTHO05D000581 2.9e-06 55.8 60 40.0
Eucgr.H02343 Eucalyptus grandis HOM05D000737 ORTHO05D000581 2.9e-06 55.8 56 46.4
FvH4_1g18520 Fragaria vesca HOM05D000737 ORTHO05D000581 2.9e-06 55.8 60 46.7
FAN19G2076 Fragaria x ananassa HOM05D000737 ORTHO05D000581 2.9e-06 55.8 60 46.7
FAN26G1571 Fragaria x ananassa HOM05D000737 ORTHO05D000581 2.9e-06 55.8 60 46.7
Lsat_1_v5_gn_4_159481 Lactuca sativa HOM05D000737 ORTHO05D000581 2.9e-06 55.8 60 43.3
Os01g0767100 Oryza sativa ssp. japonica HOM05D000737 ORTHO05D000581 2.9e-06 55.8 58 44.8
Peaxi162Scf00347g00624 Petunia axillaris HOM05D000737 ORTHO05D000581 2.9e-06 55.8 53 49.1
Solyc07g005190.3 Solanum lycopersicum HOM05D000737 ORTHO05D000581 2.9e-06 55.8 53 49.1
Sopen07g001580 Solanum pennellii HOM05D000737 ORTHO05D000581 2.9e-06 55.8 53 49.1
PGSC0003DMG400003188 Solanum tuberosum HOM05D000737 ORTHO05D000581 2.9e-06 55.8 53 49.1
GSVIVG01031436001 Vitis vinifera HOM05D000737 ORTHO05D000581 2.9e-06 55.8 57 45.6
AUR62007976 Chenopodium quinoa HOM05D000737 ORTHO05D000581 3.8e-06 55.5 60 41.7
Cre10.g422150 Chlamydomonas reinhardtii HOM05D000737 ORTHO05D000581 3.8e-06 55.5 51 49.0
Rhsim10G0092800 Rhododendron simsii HOM05D000737 ORTHO05D000581 3.8e-06 55.5 60 45.0
Ca_22088_v3 Cicer arietinum L. HOM05D000737 ORTHO05D000581 5.0e-06 55.1 60 41.7
Eucgr.H02345 Eucalyptus grandis HOM05D000737 ORTHO05D000581 5.0e-06 55.1 56 42.9
SGA_v2.0_scaffold229G43365 Striga asiatica HOM05D000737 ORTHO05D000581 5.0e-06 55.1 54 46.3
Actinidia23540 Actinidia chinensis HOM05D000737 ORTHO05D000581 6.6e-06 54.7 53 45.3
Cc06_g15320 Coffea canephora HOM05D000737 ORTHO05D000581 6.6e-06 54.7 54 48.1
SGA_v2.0_scaffold83G26436 Striga asiatica HOM05D000737 ORTHO05D000581 6.6e-06 54.7 53 45.3
TAR383G0222 Trochodendron aralioides HOM05D000737 ORTHO05D000581 6.6e-06 54.7 54 48.1
GSVIVG01031435001 Vitis vinifera HOM05D000737 ORTHO05D000581 6.6e-06 54.7 54 44.4
COL.COLO4_11634 Corchorus olitorius HOM05D000737 ORTHO05D000581 8.6e-06 54.3 55 49.1
ECA232G0467 Erigeron canadensis HOM05D000737 ORTHO05D000581 8.6e-06 54.3 60 45.0
Gohir.D05G052600 Gossypium hirsutum HOM05D000737 ORTHO05D000581 8.6e-06 54.3 53 45.3
Manes.11G154600 Manihot esculenta HOM05D000737 ORTHO05D000581 8.6e-06 54.3 53 49.1
Nn8g39797 Nelumbo nucifera HOM05D000737 ORTHO05D000581 8.6e-06 54.3 54 44.4
RcHm_v2.0_Chr2g0109161 Rosa chinensis HOM05D000737 ORTHO05D000581 8.6e-06 54.3 60 43.3
SEGI_31030 Sequoiadendron giganteum HOM05D000737 ORTHO05D000581 8.6e-06 54.3 57 49.1


User provided reference genes

Program Settings