Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 2.8e-170 602.4 447 100.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.9e-25 121.3 93 62.4
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 8.6e-23 112.5 102 56.9
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 8.6e-23 112.5 92 60.9
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.9e-22 111.3 92 59.8
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 1.9e-22 111.3 92 59.8
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.9e-22 111.3 92 59.8
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 2.5e-22 110.9 92 59.8
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.5e-22 110.9 92 59.8
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 2.5e-22 110.9 92 59.8
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 3.3e-22 110.5 92 60.9
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 7.3e-22 109.4 92 58.7
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 7.3e-22 109.4 92 56.5
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 9.6e-22 109.0 92 58.7
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 1.6e-21 108.2 92 58.7
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 6.2e-21 106.3 92 58.7
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.1e-20 105.5 92 59.8
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.4e-20 105.1 92 58.7
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 3.1e-20 104.0 92 56.5
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 3.1e-20 104.0 92 56.5
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 4.0e-20 103.6 92 57.6
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 4.0e-20 103.6 92 56.5
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 5.2e-20 103.2 92 58.7
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 5.2e-20 103.2 92 58.7
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 5.2e-20 103.2 92 58.7
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 5.2e-20 103.2 92 57.6
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 5.2e-20 103.2 92 58.7
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 8.9e-20 102.4 92 54.3
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 1.2e-19 102.1 92 57.6
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-19 102.1 92 57.6
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-19 102.1 92 57.6
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-19 102.1 92 57.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.5e-19 101.7 92 58.7
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 1.5e-19 101.7 92 57.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.5e-19 101.7 92 58.7
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 2.0e-19 101.3 92 57.6
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 2.0e-19 101.3 92 57.6
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 2.0e-19 101.3 92 57.6
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 2.0e-19 101.3 92 56.5
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 2.0e-19 101.3 92 56.5
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.6e-19 100.9 92 57.6
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.6e-19 100.9 92 57.6
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 2.6e-19 100.9 92 56.5
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.6e-19 100.9 92 56.5
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 3.4e-19 100.5 92 57.6
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 3.4e-19 100.5 92 55.4
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 3.4e-19 100.5 92 57.6
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 3.4e-19 100.5 92 56.5
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 3.4e-19 100.5 92 56.5
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 4.4e-19 100.1 92 56.5
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 5.8e-19 99.8 92 56.5
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 5.8e-19 99.8 92 57.6
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 5.8e-19 99.8 92 54.3
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 56.5
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 53.3
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 53.3
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 55.4
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 55.4
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 56.5
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 56.5
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 7.6e-19 99.4 92 56.5
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 9.9e-19 99.0 92 55.4
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 9.9e-19 99.0 92 55.4
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 9.9e-19 99.0 92 56.5
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 9.9e-19 99.0 92 54.3
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 9.9e-19 99.0 92 54.3
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 56.5
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 55.4
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 55.4
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 55.4
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 55.4
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.3e-18 98.6 92 56.5
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.7e-18 98.2 89 51.7
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 1.7e-18 98.2 92 53.3
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 2.2e-18 97.8 92 55.4
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.2e-18 97.8 92 55.4
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 2.2e-18 97.8 92 55.4
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 2.9e-18 97.4 92 54.3
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 2.9e-18 97.4 92 53.3
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 2.9e-18 97.4 92 53.3
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 3.8e-18 97.1 92 53.3
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 3.8e-18 97.1 92 54.3
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 3.8e-18 97.1 92 55.4
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 4.9e-18 96.7 92 53.3
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 4.9e-18 96.7 92 53.3
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 6.4e-18 96.3 92 54.3
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 6.4e-18 96.3 100 53.0
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 8.4e-18 95.9 92 53.3
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 8.4e-18 95.9 92 53.3
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 8.4e-18 95.9 92 53.3
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.1e-17 95.5 92 52.2
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.4e-17 95.1 92 52.2
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 1.4e-17 95.1 92 52.2
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 1.4e-17 95.1 92 53.3
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.4e-17 95.1 82 58.5
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 1.9e-17 94.7 92 51.1
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 2.4e-17 94.4 92 52.2
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 2.4e-17 94.4 95 54.7
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 3.2e-17 94.0 92 52.2
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 7.1e-17 92.8 98 51.0
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.5e-16 90.5 92 46.7
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.0e-16 89.7 79 59.5
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.3e-15 88.6 86 52.3
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-15 88.6 79 59.5
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.3e-15 88.6 92 52.2
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.3e-15 88.6 92 52.2
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 1.3e-15 88.6 92 45.7
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 6.6e-15 86.3 92 50.0
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 1.9e-14 84.7 79 58.2
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 3.3e-14 84.0 92 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 7.3e-14 82.8 78 53.8
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 1.3e-13 82.0 98 46.9
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 3.6e-13 80.5 110 47.3
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 8.1e-13 79.3 79 53.2
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 6.9e-12 76.3 92 44.6
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 1.5e-11 75.1 74 52.7
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 1.5e-11 75.1 74 52.7
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 1.5e-11 75.1 74 52.7
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.6e-11 74.3 94 45.7
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 3.4e-11 73.9 92 45.7
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 5.8e-11 73.2 141 36.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.9e-10 70.9 92 44.6
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.9e-10 70.1 92 42.4
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 4.2e-09 67.0 60 56.7
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.1e-08 64.7 60 51.7
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 7.9e-08 62.8 83 38.6


User provided reference genes

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