Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g78883 Chara braunii HOM05D005017 ORTHO05D006044 8.5e-154 547.0 277 100.0
Migut.I00995 Erythranthe guttata HOM05D005017 ORTHO05D006044 3.9e-58 229.2 240 52.5
Potri.001G199500 Populus trichocarpa HOM05D005017 ORTHO05D006044 5.1e-58 228.8 223 54.7
MBI01_g27633_MAGBIO Magnolia biondii HOM05D005017 ORTHO05D006044 8.7e-58 228.0 261 49.4
Mapoly0076s0035 Marchantia polymorpha HOM05D005017 ORTHO05D006044 8.7e-58 228.0 226 54.0
Ah.01g016970 Amaranthus hybridus HOM05D005017 ORTHO05D006044 3.7e-56 222.6 235 53.2
CSS0030454 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 3.7e-56 222.6 226 54.9
ATR0789G068 Amborella trichopoda HOM05D005017 ORTHO05D006044 1.4e-55 220.7 231 51.9
Ciclev10026315m.g Citrus clementina HOM05D005017 ORTHO05D006044 1.4e-55 220.7 232 52.2
Manes.04G137400 Manihot esculenta HOM05D005017 ORTHO05D006044 2.4e-55 219.9 223 54.7
ClCG09G000540 Citrullus lanatus HOM05D005017 ORTHO05D006044 3.1e-55 219.5 221 52.5
Dinv30400 Davidia involucrata HOM05D005017 ORTHO05D006044 1.2e-54 217.6 222 52.7
Cpa.g.sc663.1 Carica papaya HOM05D005017 ORTHO05D006044 1.5e-54 217.2 222 55.4
Actinidia21740 Actinidia chinensis HOM05D005017 ORTHO05D006044 2.0e-54 216.9 221 53.4
TAR624G0026 Trochodendron aralioides HOM05D005017 ORTHO05D006044 3.4e-54 216.1 238 50.4
Sp1g38370 Schrenkiella parvula HOM05D005017 ORTHO05D006044 1.0e-53 214.5 218 53.2
Nn8g38928 Nelumbo nucifera HOM05D005017 ORTHO05D006044 1.7e-53 213.8 223 52.5
Phvul.010G142100 Phaseolus vulgaris HOM05D005017 ORTHO05D006044 1.7e-53 213.8 229 51.1
SGA_v2.0_scaffold71G23756 Striga asiatica HOM05D005017 ORTHO05D006044 1.7e-53 213.8 259 49.0
Cc04_g02270 Coffea canephora HOM05D005017 ORTHO05D006044 2.2e-53 213.4 220 54.1
Duzib235G0510 Durio zibethinus HOM05D005017 ORTHO05D006044 2.2e-53 213.4 231 51.5
Nitab4.5_0006071g0010 Nicotiana tabacum HOM05D005017 ORTHO05D006044 2.2e-53 213.4 214 56.1
MELO3C024403.2 Cucumis melo HOM05D005017 ORTHO05D006044 2.9e-53 213.0 222 51.8
MSTRG.22609 Avicennia marina HOM05D005017 ORTHO05D006044 5.0e-53 212.2 255 47.5
Pp3c27_5930 Physcomitrium patens HOM05D005017 ORTHO05D006044 6.5e-53 211.8 221 54.3
CiPaw.01G227300 Carya illinoinensis HOM05D005017 ORTHO05D006044 8.5e-53 211.5 234 51.3
Gohir.D03G057100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 8.5e-53 211.5 226 52.2
Atru.chr1.3634 Acer truncatum HOM05D005017 ORTHO05D006044 1.1e-52 211.1 237 51.9
COL.COLO4_30606 Corchorus olitorius HOM05D005017 ORTHO05D006044 1.1e-52 211.1 229 50.7
Glyma.07G012600 Glycine max HOM05D005017 ORTHO05D006044 1.1e-52 211.1 227 52.0
Gohir.A02G116100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 1.1e-52 211.1 233 51.1
Nitab4.5_0004848g0030 Nicotiana tabacum HOM05D005017 ORTHO05D006044 1.1e-52 211.1 220 54.5
Rhsim08G0231100 Rhododendron simsii HOM05D005017 ORTHO05D006044 1.1e-52 211.1 244 49.6
Thecc.06G107700 Theobroma cacao HOM05D005017 ORTHO05D006044 1.1e-52 211.1 229 51.5
AL1G59670 Arabidopsis lyrata HOM05D005017 ORTHO05D006044 1.4e-52 210.7 222 51.8
AT1G51730 Arabidopsis thaliana HOM05D005017 ORTHO05D006044 1.4e-52 210.7 222 51.8
Carub.0001s4060 Capsella rubella HOM05D005017 ORTHO05D006044 1.9e-52 210.3 214 53.3
CsaV3_7G034910 Cucumis sativus L. HOM05D005017 ORTHO05D006044 1.9e-52 210.3 222 51.4
Gorai.003G060200 Gossypium raimondii HOM05D005017 ORTHO05D006044 1.9e-52 210.3 226 51.8
Thhalv10011475m.g Eutrema salsugineum HOM05D005017 ORTHO05D006044 2.5e-52 209.9 222 52.7
Ca_23294_v3 Cicer arietinum L. HOM05D005017 ORTHO05D006044 3.2e-52 209.5 232 52.6
Aa31LG10G3080 Aethionema arabicum HOM05D005017 ORTHO05D006044 4.2e-52 209.1 237 49.4
HanXRQChr04g0095781 Helianthus annuus HOM05D005017 ORTHO05D006044 5.5e-52 208.8 227 52.0
PGR102G3241 Punica granatum HOM05D005017 ORTHO05D006044 7.2e-52 208.4 222 52.3
Sopen03g040120 Solanum pennellii HOM05D005017 ORTHO05D006044 7.2e-52 208.4 224 55.8
BolC6t36489H Brassica oleracea HOM05D005017 ORTHO05D006044 9.4e-52 208.0 232 49.6
CANSAT56G3588 Cannabis sativa HOM05D005017 ORTHO05D006044 9.4e-52 208.0 232 50.9
TWI79G0337 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 1.2e-51 207.6 248 48.8
Prupe.3G052700 Prunus persica HOM05D005017 ORTHO05D006044 1.6e-51 207.2 234 50.4
Aqoxy2G03852 Aquilegia oxysepala HOM05D005017 ORTHO05D006044 2.7e-51 206.5 243 48.1
PGSC0003DMG401002511 Solanum tuberosum HOM05D005017 ORTHO05D006044 2.7e-51 206.5 224 55.8
Zm00001eb162290 Zea mays HOM05D005017 ORTHO05D006044 2.7e-51 206.5 223 53.8
Sed0003007 Sechium edule HOM05D005017 ORTHO05D006044 3.6e-51 206.1 223 50.2
THA.LOC104817935 Tarenaya hassleriana HOM05D005017 ORTHO05D006044 4.6e-51 205.7 250 46.4
Lj3g0014772 Lotus japonicus HOM05D005017 ORTHO05D006044 6.1e-51 205.3 233 52.4
CARHR041890 Cardamine hirsuta HOM05D005017 ORTHO05D006044 1.4e-50 204.1 218 50.9
Cfa003607 Carpinus fangiana HOM05D005017 ORTHO05D006044 1.4e-50 204.1 232 49.6
Atru.chr1.3630 Acer truncatum HOM05D005017 ORTHO05D006044 1.8e-50 203.8 230 51.3
CAN.G1668.3 Capsicum annuum HOM05D005017 ORTHO05D006044 1.8e-50 203.8 224 53.6
Os01g0558300 Oryza sativa ssp. japonica HOM05D005017 ORTHO05D006044 1.8e-50 203.8 250 48.0
Potri.001G193700 Populus trichocarpa HOM05D005017 ORTHO05D006044 1.8e-50 203.8 234 48.7
Sc12g0009900 Simmondsia chinensis HOM05D005017 ORTHO05D006044 1.8e-50 203.8 184 54.9
AUR62038338 Chenopodium quinoa HOM05D005017 ORTHO05D006044 3.0e-50 203.0 225 49.3
TPR.G8766 Trifolium pratense HOM05D005017 ORTHO05D006044 3.0e-50 203.0 236 50.4
GSVIVG01016892001 Vitis vinifera HOM05D005017 ORTHO05D006044 3.0e-50 203.0 223 50.2
A05p19400 Brassica napus HOM05D005017 ORTHO05D006044 3.9e-50 202.6 231 48.5
C03p90280 Brassica napus HOM05D005017 ORTHO05D006044 3.9e-50 202.6 232 48.7
Dinv37934 Davidia involucrata HOM05D005017 ORTHO05D006044 3.9e-50 202.6 241 49.4
VMungo0331G1330 Vigna mungo HOM05D005017 ORTHO05D006044 3.9e-50 202.6 244 47.5
EL10Ac9g21132 Beta vulgaris HOM05D005017 ORTHO05D006044 5.1e-50 202.2 225 49.3
AUR62023908 Chenopodium quinoa HOM05D005017 ORTHO05D006044 5.1e-50 202.2 225 49.3
SEGI_04320 Sequoiadendron giganteum HOM05D005017 ORTHO05D006044 5.1e-50 202.2 223 51.1
Medtr8g015590 Medicago truncatula HOM05D005017 ORTHO05D006044 6.7e-50 201.8 233 50.6
BraA08t32293Z Brassica rapa HOM05D005017 ORTHO05D006044 8.8e-50 201.4 232 48.3
ECA247G1989 Erigeron canadensis HOM05D005017 ORTHO05D006044 8.8e-50 201.4 221 50.7
HPP92_023230 Vanilla planifolia HOM05D005017 ORTHO05D006044 1.5e-49 200.7 214 51.9
Pp3c5_13990 Physcomitrium patens HOM05D005017 ORTHO05D006044 2.6e-49 199.9 224 50.9
A08p02530 Brassica napus HOM05D005017 ORTHO05D006044 5.7e-49 198.7 232 47.8
MD09G1196300 Malus domestica HOM05D005017 ORTHO05D006044 7.4e-49 198.4 236 49.6
Lsat_1_v5_gn_1_36441 Lactuca sativa HOM05D005017 ORTHO05D006044 9.7e-49 198.0 217 50.2
HanXRQChr12g0360701 Helianthus annuus HOM05D005017 ORTHO05D006044 1.3e-48 197.6 228 50.9
Psat4g194480 Pisum sativum HOM05D005017 ORTHO05D006044 2.2e-48 196.8 228 49.1
FAN14G3976 Fragaria x ananassa HOM05D005017 ORTHO05D006044 2.8e-48 196.4 233 48.5
Glyma.08G196300 Glycine max HOM05D005017 ORTHO05D006044 2.8e-48 196.4 228 47.8
MD17G1177100 Malus domestica HOM05D005017 ORTHO05D006044 3.7e-48 196.1 236 49.2
Lj5C49T18 Lonicera japonica HOM05D005017 ORTHO05D006044 4.8e-48 195.7 177 55.4
BraA05t20844Z Brassica rapa HOM05D005017 ORTHO05D006044 8.2e-48 194.9 238 47.1
Peaxi162Scf00038g01246 Petunia axillaris HOM05D005017 ORTHO05D006044 8.2e-48 194.9 178 59.0
RcHm_v2.0_Chr2g0142451 Rosa chinensis HOM05D005017 ORTHO05D006044 8.2e-48 194.9 231 48.5
Lalb_Chr01g0013321 Lupinus albus HOM05D005017 ORTHO05D006044 1.8e-47 193.7 241 49.4
CDE05G2485 Ceratophyllum demersum HOM05D005017 ORTHO05D006044 4.1e-47 192.6 222 49.1
Solyc03g121310.2 Solanum lycopersicum HOM05D005017 ORTHO05D006044 4.1e-47 192.6 228 51.8
TWI31G0253 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 6.9e-47 191.8 233 48.5
BolC3t21350H Brassica oleracea HOM05D005017 ORTHO05D006044 1.2e-46 191.0 233 48.1
Lsat_1_v5_gn_5_133981 Lactuca sativa HOM05D005017 ORTHO05D006044 1.2e-46 191.0 224 48.7
Eucgr.F03103 Eucalyptus grandis HOM05D005017 ORTHO05D006044 1.5e-46 190.7 231 48.1
BcaC01g01293 Brassica carinata HOM05D005017 ORTHO05D006044 7.7e-46 188.3 251 44.6
DCAR_026373 Daucus carota HOM05D005017 ORTHO05D006044 7.7e-46 188.3 254 46.1
FvH4_6g32940 Fragaria vesca HOM05D005017 ORTHO05D006044 7.7e-46 188.3 231 47.2
FAN09G3568 Fragaria x ananassa HOM05D005017 ORTHO05D006044 1.0e-45 188.0 231 46.8
unitig_0.g2868 Utricularia gibba HOM05D005017 ORTHO05D006044 5.0e-45 185.7 193 50.3
ECA234G0069 Erigeron canadensis HOM05D005017 ORTHO05D006044 1.9e-44 183.7 198 52.0
Hma1.2p1_0679F.1_g202280 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 2.5e-44 183.3 233 45.5
Lalb_Chr04g0263111 Lupinus albus HOM05D005017 ORTHO05D006044 2.5e-44 183.3 231 48.5
C06p13290 Brassica napus HOM05D005017 ORTHO05D006044 5.5e-44 182.2 231 45.9
PSO210G2569 Papaver somniferum HOM05D005017 ORTHO05D006044 7.2e-44 181.8 223 49.3
BcaC08g43934 Brassica carinata HOM05D005017 ORTHO05D006044 1.2e-43 181.0 218 47.2
vmacro18822 Vaccinium macrocarpon HOM05D005017 ORTHO05D006044 2.1e-43 180.3 274 43.8
QL05p015800 Quercus lobata HOM05D005017 ORTHO05D006044 1.8e-42 177.2 329 36.2
Haze_15918 Corylus avellana HOM05D005017 ORTHO05D006044 1.1e-41 174.5 173 51.4
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 1.1e-41 174.5 242 47.1
Ah.01g004460 Amaranthus hybridus HOM05D005017 ORTHO05D006044 2.2e-40 170.2 197 49.7
SalBow6G5092 Salvia bowleyana HOM05D005017 ORTHO05D006044 1.1e-39 167.9 243 42.8
arahy.Tifrunner.gnm1.ann1.TCAK26 Arachis hypogaea HOM05D005017 ORTHO05D006044 5.3e-39 165.6 232 45.7
SMO300G0020 Selaginella moellendorffii HOM05D005017 ORTHO05D006044 1.2e-38 164.5 241 43.6
arahy.Tifrunner.gnm1.ann1.ZK2LT4 Arachis hypogaea HOM05D005017 ORTHO05D006044 2.6e-38 163.3 232 45.3
FAN05G4929 Fragaria x ananassa HOM05D005017 ORTHO05D006044 3.5e-38 162.9 177 47.5
Gohir.A05G133633 Gossypium hirsutum HOM05D005017 ORTHO05D006044 2.5e-36 156.8 211 45.0
SGA_v2.0_scaffold45G16987 Striga asiatica HOM05D005017 ORTHO05D006044 6.1e-35 152.1 220 44.1
Actinidia32130 Actinidia chinensis HOM05D005017 ORTHO05D006044 2.3e-34 150.2 197 44.7
BcaB07g33629 Brassica carinata HOM05D005017 ORTHO05D006044 7.5e-33 145.2 174 50.0
Zm00001eb356680 Zea mays HOM05D005017 ORTHO05D006044 1.3e-32 144.4 222 40.5
CSS0006284 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 1.7e-29 134.0 115 60.0
Lj9A517T55 Lonicera japonica HOM05D005017 ORTHO05D006044 2.9e-29 133.3 211 40.3
Gorai.009G139400 Gossypium raimondii HOM05D005017 ORTHO05D006044 5.0e-29 132.5 136 55.9
Oeu052817.1 Olea europaea HOM05D005017 ORTHO05D006044 6.1e-27 125.6 113 50.4
PRCOL_00005001 Prasinoderma coloniale HOM05D005017 ORTHO05D006044 1.4e-26 124.4 239 35.6
PSO170G1437 Papaver somniferum HOM05D005017 ORTHO05D006044 1.5e-25 120.9 106 57.5
MCO07G323 Micromonas commoda HOM05D005017 ORTHO05D006044 5.7e-25 119.0 189 37.0
Cre03.g201776 Chlamydomonas reinhardtii HOM05D005017 ORTHO05D006044 4.8e-24 115.9 212 31.1
Gohir.D05G135550 Gossypium hirsutum HOM05D005017 ORTHO05D006044 1.4e-23 114.4 151 47.7
BcaB02g11274 Brassica carinata HOM05D005017 ORTHO05D006044 2.7e-22 110.2 202 36.6
Hma1.2p1_0679F.1_g202290 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 5.9e-22 109.0 149 44.3
A06p02280 Brassica napus HOM05D005017 ORTHO05D006044 1.2e-19 101.3 195 37.4
Aa31csc1849G10 Aethionema arabicum HOM05D005017 ORTHO05D006044 2.4e-15 87.0 99 51.5
Duzib192G1032 Durio zibethinus HOM05D005017 ORTHO05D006044 1.0e-13 81.6 236 30.5
Oeu052818.1 Olea europaea HOM05D005017 ORTHO05D006044 1.3e-13 81.3 105 46.7
FAN02G2875 Fragaria x ananassa HOM05D005017 ORTHO05D006044 1.7e-13 80.9 79 54.4
Aa31LG1G17240 Aethionema arabicum HOM05D005017 ORTHO05D006044 5.0e-13 79.3 57 68.4
PSO135G0227 Papaver somniferum HOM05D005017 ORTHO05D006044 8.6e-13 78.6 70 54.3
PSO782G0965 Papaver somniferum HOM05D005017 ORTHO05D006044 3.3e-12 76.6 81 48.1
PSO675G1433 Papaver somniferum HOM05D005017 ORTHO05D006044 4.3e-12 76.3 70 51.4
Oeu026734.1 Olea europaea HOM05D005017 ORTHO05D006044 4.0e-10 69.7 61 49.2
CSS0004179 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 2.7e-06 57.0 76 44.7


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