Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g78862 Chara braunii HOM05D010323 ORTHO05D000013 0.0e+00 1122.8 709 100.0
CBR_g37073 Chara braunii HOM05D000017 ORTHO05D000013 5.5e-157 558.9 368 75.8
CBR_g37229 Chara braunii HOM05D000017 ORTHO05D000013 1.2e-148 531.2 368 73.6
CBR_g78822 Chara braunii HOM05D010323 ORTHO05D000013 9.2e-144 515.0 373 73.5
CBR_g32386 Chara braunii HOM05D000017 ORTHO05D000013 2.5e-141 506.9 315 78.4
CBR_g78838 Chara braunii HOM05D010323 ORTHO05D000013 8.7e-94 349.0 200 84.5
CBR_g27991 Chara braunii HOM05D000017 ORTHO05D000013 2.1e-71 274.6 299 49.5
CBR_g58026 Chara braunii HOM05D000017 ORTHO05D000013 1.8e-54 218.4 190 54.2
CBR_g8726 Chara braunii HOM05D000017 ORTHO05D000013 7.0e-51 206.5 190 52.6
CBR_g8720 Chara braunii HOM05D000017 ORTHO05D000013 2.0e-45 188.3 207 49.8
CBR_g8725 Chara braunii HOM05D000017 ORTHO05D000013 6.3e-44 183.3 164 53.0
CBR_g48236 Chara braunii HOM05D000017 ORTHO05D000013 7.3e-32 143.3 77 88.3
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 8.3e-28 129.8 207 36.7
CBR_g8176 Chara braunii HOM05D000017 ORTHO05D000013 3.6e-23 114.4 158 44.3
CBR_g78828 Chara braunii HOM05D010323 ORTHO05D000013 6.8e-22 110.2 105 58.1
CBR_g25813 Chara braunii HOM05D001559 ORTHO05D002307 3.4e-21 107.8 196 38.8
CBR_g19272 Chara braunii HOM05D000017 ORTHO05D000013 3.0e-17 94.7 325 24.0
CBR_g2849 Chara braunii HOM05D002338 ORTHO05D000013 8.6e-17 93.2 204 30.4
CBR_g50276 Chara braunii HOM05D000017 ORTHO05D000013 9.5e-16 89.7 67 58.2
CBR_g44388 Chara braunii HOM05D000017 ORTHO05D000013 4.7e-15 87.4 220 30.9
CBR_g38601 Chara braunii HOM05D000017 ORTHO05D000013 8.9e-14 83.2 249 30.1
CBR_g39989 Chara braunii HOM05D001289 ORTHO05D000013 7.5e-13 80.1 191 27.2
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 4.1e-11 74.3 171 28.1
CBR_g78858 Chara braunii HOM05D000017 ORTHO05D000013 4.1e-11 74.3 78 46.2
CANSAT54G0154 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-10 72.8 194 26.3
Solyc01g097030.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 1.6e-10 72.4 219 25.1
Sopen01g040720 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-10 72.4 219 25.1
ATR0665G260 Amborella trichopoda HOM05D000017 ORTHO05D000013 4.6e-10 70.9 166 27.7
RcHm_v2.0_Chr6g0289171 Rosa chinensis HOM05D000017 ORTHO05D000013 6.0e-10 70.5 182 26.4
HPP92_017780 Vanilla planifolia HOM05D000017 ORTHO05D000013 1.7e-09 68.9 188 25.5
CDE02G3822 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 3.0e-09 68.2 195 25.1
FvH4_2g22241 Fragaria vesca HOM05D000017 ORTHO05D000013 3.9e-09 67.8 182 25.8
Lj5g0009746 Lotus japonicus HOM05D000017 ORTHO05D000013 3.9e-09 67.8 190 24.7
THA.LOC104799254 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.9e-09 67.8 166 26.5
CDE06G1021 Ceratophyllum demersum HOM05D000200 ORTHO05D000262 8.6e-09 66.6 195 25.1
Aqoxy6G02962 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 1.1e-08 66.2 173 25.4
CSS0026159 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-08 66.2 197 24.9
CSS0046403 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-08 66.2 197 24.9
CBR_g37230 Chara braunii HOM05D010323 ORTHO05D000013 1.1e-08 66.2 43 81.4
CBR_g50591 Chara braunii HOM05D010323 ORTHO05D132024 1.1e-08 66.2 107 38.3
Dinv22459 Davidia involucrata HOM05D000017 ORTHO05D000013 1.1e-08 66.2 175 25.1
PSO063G4709 Papaver somniferum HOM05D000017 ORTHO05D000013 1.1e-08 66.2 208 25.0
TWI36G0574 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-08 65.9 169 27.8
Duzib177G0259 Durio zibethinus HOM05D000017 ORTHO05D000013 1.9e-08 65.5 166 25.9
Lj2C1156G11 Lonicera japonica HOM05D000017 ORTHO05D000013 1.9e-08 65.5 204 24.0
Prupe.8G229900 Prunus persica HOM05D000017 ORTHO05D000013 1.9e-08 65.5 194 24.7
Dinv20264 Davidia involucrata HOM05D000017 ORTHO05D000013 2.5e-08 65.1 195 26.7
Nn1g02630 Nelumbo nucifera HOM05D000017 ORTHO05D000013 2.5e-08 65.1 166 26.5
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 5.6e-08 63.9 155 27.1
QL11p027748 Quercus lobata HOM05D000017 ORTHO05D000013 5.6e-08 63.9 173 23.7
Sabra19G0017600 Salix brachista HOM05D000017 ORTHO05D000013 5.6e-08 63.9 181 26.0
Sabra19G0024700 Salix brachista HOM05D000017 ORTHO05D000013 5.6e-08 63.9 181 26.0
ECA233G6249 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.3e-08 63.5 175 24.0
Prupe.8G156200 Prunus persica HOM05D000017 ORTHO05D000013 7.3e-08 63.5 173 23.7
Rhsim11G0147200 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.3e-08 63.5 167 25.1
Sopen12g002860 Solanum pennellii HOM05D000017 ORTHO05D000013 7.3e-08 63.5 164 26.8
MSTRG.25455 Avicennia marina HOM05D000017 ORTHO05D000013 1.2e-07 62.8 173 26.6
CANSAT25G3737 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 62.4 173 22.5
CANSAT35G0454 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 62.4 189 24.3
MD15G1396600 Malus domestica HOM05D000017 ORTHO05D000013 1.6e-07 62.4 173 23.7
SHI31358 Sapria himalayana HOM05D000017 ORTHO05D000013 1.6e-07 62.4 166 25.3
CBR_g4364 Chara braunii HOM05D000017 ORTHO05D000013 2.8e-07 61.6 247 21.1
Duzib177G0288 Durio zibethinus HOM05D000017 ORTHO05D000013 2.8e-07 61.6 175 24.6
CBR_g38937 Chara braunii HOM05D000017 ORTHO05D000013 4.7e-07 60.8 154 26.0
CBR_g37205 Chara braunii HOM05D000017 ORTHO05D000013 8.1e-07 60.1 213 23.5
CDE02G1797 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 1.1e-06 59.7 177 24.3
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-06 59.3 166 24.7
Hma1.2p1_0013F.1_g007885 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-06 58.9 166 25.3
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 2.3e-06 58.5 142 24.6
Lalb_Chr21g0306201 Lupinus albus HOM05D000017 ORTHO05D000013 2.3e-06 58.5 209 22.5
Os01g0595300 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 2.3e-06 58.5 154 27.3
Oeu043048.1 Olea europaea HOM05D000017 ORTHO05D000013 4.0e-06 57.8 179 25.1
THA.LOC104800807 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.0e-06 57.8 166 24.7
CANSAT11G0629 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 57.4 173 24.3
Lj7C584T2 Lonicera japonica HOM05D000017 ORTHO05D000013 5.2e-06 57.4 164 22.6
Ah.06g188790 Amaranthus hybridus HOM05D000017 ORTHO05D000013 6.8e-06 57.0 173 22.0
ECA246G2575 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.9e-06 56.6 167 24.0
Oeu020631.1 Olea europaea HOM05D000017 ORTHO05D000013 8.9e-06 56.6 180 25.0
Oeu064469.1 Olea europaea HOM05D000017 ORTHO05D000013 8.9e-06 56.6 180 24.4


User provided reference genes

Program Settings