Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 0.0e+00 2356.3 1318 100.0
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 0.0e+00 1078.5 798 76.8
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 2.4e-161 574.3 795 44.3
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 1.2e-157 562.0 815 41.5
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 1.9e-150 538.1 859 38.8
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 2.5e-150 537.7 871 38.2
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 5.5e-150 536.6 861 39.3
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 7.1e-150 536.2 821 40.9
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 1.6e-149 535.0 857 38.6
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 2.1e-149 534.6 860 39.0
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 1.3e-148 531.9 867 38.6
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 1.3e-148 531.9 866 39.4
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 3.0e-148 530.8 869 37.7
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 3.9e-148 530.4 862 38.4
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 3.9e-148 530.4 865 40.0
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 6.7e-148 529.6 822 39.1
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 1.1e-147 528.9 862 38.5
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 1.5e-147 528.5 863 39.0
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 1.9e-147 528.1 862 38.5
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.9e-147 528.1 859 39.9
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 3.3e-147 527.3 863 38.5
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 9.7e-147 525.8 862 38.4
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 1.6e-146 525.0 876 39.2
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 2.8e-146 524.2 863 38.5
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 2.8e-146 524.2 800 40.9
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 3.7e-146 523.9 869 39.0
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 4.8e-146 523.5 872 39.0
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 8.2e-146 522.7 862 36.9
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 1.8e-145 521.5 874 37.5
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 4.1e-145 520.4 895 38.2
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 4.1e-145 520.4 858 38.2
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 5.3e-145 520.0 862 37.0
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 5.3e-145 520.0 862 36.8
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 9.0e-145 519.2 879 37.2
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 2.0e-144 518.1 869 37.9
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 4.5e-144 516.9 860 38.6
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 5.9e-144 516.5 861 38.3
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 1.0e-143 515.8 867 39.0
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 1.7e-143 515.0 865 37.8
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 2.2e-143 514.6 864 37.5
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 5.0e-143 513.5 869 36.2
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 5.0e-143 513.5 862 37.9
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 5.0e-143 513.5 859 38.4
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 8.5e-143 512.7 864 38.2
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 1.1e-142 512.3 868 38.2
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 2.5e-142 511.1 860 38.0
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 4.2e-142 510.4 870 37.5
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 4.2e-142 510.4 862 37.9
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 1.2e-141 508.8 868 37.4
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 3.6e-141 507.3 860 37.3
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 3.6e-141 507.3 820 39.6
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 4.6e-141 506.9 872 38.1
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 7.9e-141 506.1 861 37.9
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 1.0e-140 505.8 867 37.6
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 1.0e-140 505.8 865 37.8
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 1.8e-140 505.0 862 37.2
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 1.8e-140 505.0 862 37.9
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.8e-140 505.0 865 36.8
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 3.9e-140 503.8 874 37.3
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 3.9e-140 503.8 883 38.3
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 3.9e-140 503.8 863 37.2
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 5.1e-140 503.4 862 38.3
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 5.1e-140 503.4 862 37.9
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 5.1e-140 503.4 821 39.1
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 8.8e-140 502.7 820 38.0
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 8.8e-140 502.7 863 37.5
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 1.9e-139 501.5 862 38.1
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 1.9e-139 501.5 861 37.6
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 2.5e-139 501.1 865 38.2
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 3.3e-139 500.7 863 37.5
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 3.3e-139 500.7 866 38.0
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 5.7e-139 500.0 858 37.3
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 7.4e-139 499.6 859 37.5
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 7.4e-139 499.6 880 36.6
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 6.3e-138 496.5 863 37.2
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 1.8e-137 495.0 876 37.3
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.8e-137 495.0 860 38.5
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 2.4e-137 494.6 857 36.6
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 2.6e-136 491.1 820 38.0
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 3.4e-136 490.7 864 37.8
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 3.4e-136 490.7 853 39.3
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 6.5e-135 486.5 898 36.4
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 8.5e-135 486.1 796 38.4
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.4e-134 485.3 862 36.5
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 9.4e-134 482.6 916 35.8
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 6.1e-133 479.9 867 36.4
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 3.9e-132 477.2 862 36.2
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 5.1e-132 476.9 871 36.3
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 4.4e-131 473.8 854 37.1
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 1.3e-130 472.2 861 36.0
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 3.1e-129 467.6 868 36.3
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 9.4e-126 456.1 916 36.2
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 1.8e-124 451.8 795 36.7
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 4.4e-123 447.2 940 33.4
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 9.7e-123 446.0 883 35.2
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 8.2e-122 443.0 793 35.4
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.6e-115 421.4 820 37.2
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 2.6e-115 421.4 858 33.8
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 6.3e-114 416.8 725 37.5
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 2.5e-94 351.7 702 35.2
ATR0759G074 Amborella trichopoda HOM05D005589 ORTHO05D006948 9.8e-91 339.7 403 45.7
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 3.2e-89 334.7 874 31.1
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 6.2e-85 320.5 627 35.1
SalBow3G3271 Salvia bowleyana HOM05D005589 ORTHO05D006948 6.4e-82 310.5 352 48.6
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 2.3e-71 275.4 679 31.8
SEGI_37108 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 8.6e-71 273.5 298 47.7
Cre16.g686650 Chlamydomonas reinhardtii HOM05D005589 ORTHO05D006948 2.8e-69 268.5 837 28.3
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 2.6e-59 235.3 580 31.4
CDE02G1253 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 1.1e-57 229.9 264 48.5
Actinidia37259 Actinidia chinensis HOM05D005589 ORTHO05D006948 5.4e-57 227.6 273 44.0
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 7.8e-56 223.8 890 27.5
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 4.6e-48 198.0 524 30.3
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 3.0e-47 195.3 428 33.4
AL1G56500 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 6.7e-47 194.1 482 30.9
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 7.9e-32 144.1 291 36.1
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.5e-30 139.8 252 38.9
SEGI_34947 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 1.6e-24 119.8 386 26.9
Sc21g0005380 Simmondsia chinensis HOM05D005589 ORTHO05D006948 3.8e-18 98.6 110 44.5
BcaB01g01018 Brassica carinata HOM05D005589 ORTHO05D006948 1.1e-17 97.1 112 45.5
ATR0759G057 Amborella trichopoda HOM05D005589 ORTHO05D006948 1.2e-16 93.6 91 52.7
arahy.Tifrunner.gnm1.ann1.35TLEJ Arachis hypogaea HOM05D005589 ORTHO05D006948 1.7e-13 83.2 233 26.6
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 6.3e-13 81.3 99 48.5
ATR0759G002 Amborella trichopoda HOM05D005589 ORTHO05D006948 1.8e-12 79.7 140 35.7
CSS0011793 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 2.6e-11 75.9 162 29.0
Actinidia37258 Actinidia chinensis HOM05D005589 ORTHO05D006948 7.7e-11 74.3 70 55.7
Gohir.D08G115100 Gossypium hirsutum HOM05D005589 ORTHO05D047064 1.3e-10 73.6 69 44.9
Gorai.004G124000 Gossypium raimondii HOM05D005589 ORTHO05D047064 1.3e-10 73.6 69 44.9
SEGI_32388 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 1.1e-09 70.5 61 60.7
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 4.4e-06 58.5 121 32.2
arahy.Tifrunner.gnm1.ann1.HF8MSC Arachis hypogaea HOM05D005589 ORTHO05D006948 5.7e-06 58.2 117 35.0


User provided reference genes

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