Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 9.2e-190 667.2 440 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 5.5e-25 119.8 139 48.9
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.8e-20 104.8 142 41.5
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 5.3e-20 103.2 139 45.3
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.2e-18 97.8 144 41.7
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.3e-13 82.0 149 35.6
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 2.8e-13 80.9 140 34.3
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.8e-13 80.1 139 35.3
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 6.3e-13 79.7 139 35.3
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 8.2e-13 79.3 145 35.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.1e-12 79.0 140 34.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.4e-12 78.6 140 34.3
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.8e-12 78.2 143 34.3
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.8e-12 78.2 155 32.9
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 3.1e-12 77.4 141 36.2
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.1e-12 77.4 148 33.8
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 5.3e-12 76.6 143 32.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 7.0e-12 76.3 144 34.0
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.0e-12 76.3 139 36.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 9.1e-12 75.9 140 33.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 9.1e-12 75.9 141 31.9
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 9.1e-12 75.9 141 35.5
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 9.1e-12 75.9 142 33.8
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 1.2e-11 75.5 139 33.8
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.2e-11 75.5 141 35.5
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.6e-11 75.1 148 33.8
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.6e-11 75.1 140 35.0
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.6e-11 75.1 139 34.5
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.6e-11 75.1 141 35.5
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.0e-11 74.7 139 34.5
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.6e-11 74.3 143 34.3
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.5e-11 73.9 140 32.9
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 3.5e-11 73.9 140 33.6
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.5e-11 73.9 139 35.3
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.5e-11 73.9 139 35.3
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.5e-11 73.9 139 35.3
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 4.5e-11 73.6 139 34.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 4.5e-11 73.6 141 34.8
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 5.9e-11 73.2 142 33.1
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 5.9e-11 73.2 142 33.1
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 5.9e-11 73.2 143 35.0
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 5.9e-11 73.2 140 32.9
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.9e-11 73.2 148 31.8
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 5.9e-11 73.2 141 33.3
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 5.9e-11 73.2 143 32.2
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 5.9e-11 73.2 148 34.5
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 5.9e-11 73.2 140 35.0
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 7.7e-11 72.8 155 35.5
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 7.7e-11 72.8 150 31.3
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 1.0e-10 72.4 147 36.7
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.0e-10 72.4 156 34.0
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.0e-10 72.4 140 32.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.0e-10 72.4 146 32.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.0e-10 72.4 152 34.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.3e-10 72.0 139 33.1
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.3e-10 72.0 140 32.9
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.3e-10 72.0 157 33.8
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.7e-10 71.6 146 32.2
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.7e-10 71.6 139 34.5
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.2e-10 71.2 157 35.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.2e-10 71.2 143 33.6
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.9e-10 70.9 140 32.1
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.9e-10 70.9 140 32.1
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.9e-10 70.9 144 34.0
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 3.8e-10 70.5 142 33.8
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 3.8e-10 70.5 140 31.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.8e-10 70.5 144 34.0
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.8e-10 70.5 139 31.7
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.0e-10 70.1 144 34.0
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.0e-10 70.1 154 33.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 5.0e-10 70.1 146 32.9
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 8.5e-10 69.3 142 30.3
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 8.5e-10 69.3 149 31.5
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 8.5e-10 69.3 139 32.4
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.1e-09 68.9 160 36.9
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.1e-09 68.9 141 34.0
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.1e-09 68.9 139 33.8
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.1e-09 68.9 151 35.8
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.5e-09 68.6 145 33.8
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.5e-09 68.6 141 33.3
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 2.5e-09 67.8 150 35.3
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 2.5e-09 67.8 150 35.3
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 2.5e-09 67.8 150 35.3
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 2.5e-09 67.8 150 35.3
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 2.5e-09 67.8 150 35.3
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.5e-09 67.8 140 33.6
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 2.5e-09 67.8 139 32.4
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 3.2e-09 67.4 148 31.8
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 4.2e-09 67.0 152 35.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 4.2e-09 67.0 139 30.9
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.5e-09 66.6 157 32.5
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 5.5e-09 66.6 141 32.6
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 5.5e-09 66.6 140 30.7
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 7.2e-09 66.2 145 33.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 7.2e-09 66.2 141 34.8
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 9.4e-09 65.9 142 32.4
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.2e-08 65.5 147 32.0
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.6e-08 65.1 141 31.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.6e-08 65.1 144 34.0
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.1e-08 64.7 141 32.6
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.7e-08 64.3 137 32.1
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 4.7e-08 63.5 142 31.0
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 4.7e-08 63.5 149 32.2
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 8.0e-08 62.8 150 30.7
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 8.0e-08 62.8 152 30.3
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.8e-07 61.6 145 30.3
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 6.8e-07 59.7 151 33.1


User provided reference genes

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