Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 2.2e-77 292.4 158 100.0
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 6.5e-66 254.2 152 90.1
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 2.4e-28 129.4 140 50.0
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 4.1e-28 128.6 141 48.2
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 3.5e-27 125.6 150 45.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.0e-23 114.0 141 48.9
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.3e-23 112.8 141 42.6
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.2e-22 110.5 136 44.1
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.2e-22 110.5 138 43.5
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.0e-22 109.8 136 44.1
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.0e-22 109.8 136 44.9
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 2.6e-22 109.4 141 43.3
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.6e-22 109.4 136 44.9
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.4e-22 109.0 139 41.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 3.4e-22 109.0 136 44.1
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 4.4e-22 108.6 136 44.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 5.8e-22 108.2 139 41.7
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 5.8e-22 108.2 136 42.6
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 2.2e-21 106.3 136 44.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.2e-21 106.3 136 41.9
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.9e-21 105.9 138 42.8
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 2.9e-21 105.9 139 46.8
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 4.9e-21 105.1 136 43.4
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 4.9e-21 105.1 139 40.3
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 8.3e-21 104.4 136 42.6
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.3e-21 104.4 152 39.5
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.4e-20 103.6 136 41.2
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.4e-20 103.6 134 42.5
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.4e-20 103.6 137 41.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 1.9e-20 103.2 136 42.6
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.9e-20 103.2 136 41.9
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 4.1e-20 102.1 141 44.7
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.4e-20 101.7 151 38.4
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 9.2e-20 100.9 136 41.2
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.2e-19 100.5 136 40.4
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.2e-19 100.5 142 38.7
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.2e-19 100.5 142 38.7
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.2e-19 100.5 136 40.4
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.2e-19 100.5 138 42.0
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.6e-19 100.1 136 40.4
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.0e-19 99.8 136 39.7
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.0e-19 99.8 136 39.7
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.7e-19 99.4 136 41.2
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 4.6e-19 98.6 136 40.4
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 4.6e-19 98.6 132 44.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.0e-18 97.4 136 40.4
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.3e-18 97.1 138 42.0
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.3e-18 97.1 136 39.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 1.7e-18 96.7 138 42.0
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.7e-18 96.7 136 39.0
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 2.3e-18 96.3 141 39.7
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 3.9e-18 95.5 140 38.6
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.9e-18 95.5 127 40.9
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 6.6e-18 94.7 136 38.2
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 6.6e-18 94.7 138 40.6
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 8.6e-18 94.4 136 38.2
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 8.6e-18 94.4 127 42.5
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 1.1e-17 94.0 136 39.7
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.5e-17 93.6 140 40.0
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 2.5e-17 92.8 127 40.9
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 3.3e-17 92.4 127 37.8
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.2e-16 90.5 127 40.2
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.2e-16 90.5 170 33.5
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 1.6e-16 90.1 127 40.2
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 2.8e-16 89.4 140 35.7
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 3.6e-16 89.0 135 39.3
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 4.7e-16 88.6 138 37.7
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 8.1e-16 87.8 135 40.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 1.8e-15 86.7 130 36.2
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.3e-15 86.3 127 37.0
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 8.9e-15 84.3 85 48.2
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.2e-14 84.0 117 41.0
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.5e-14 83.6 111 48.6
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 4.4e-14 82.0 127 36.2
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 4.4e-14 82.0 125 37.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 5.8e-14 81.6 135 37.8
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 2.9e-13 79.3 136 36.8
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 4.9e-13 78.6 131 38.9
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.4e-12 76.3 80 48.8
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.2e-12 75.9 105 37.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.1e-12 74.7 86 44.2
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.2e-12 74.3 86 44.2
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.1e-11 73.2 80 47.5
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 2.7e-11 72.8 106 40.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.0e-11 71.6 86 43.0
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 6.0e-11 71.6 80 47.5
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 8.6e-10 67.8 89 40.4
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 7.3e-09 64.7 59 54.2
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.8e-07 58.2 117 32.5
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 3.4e-06 55.8 92 37.0


User provided reference genes

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