Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g75372 Chara braunii HOM05D003115 ORTHO05D003595 6.3e-43 177.2 98 100.0
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 4.4e-12 74.7 79 53.2
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 1.3e-11 73.2 81 51.9
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 9.1e-10 67.0 74 47.3
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 2.0e-09 65.9 74 44.6
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 1.7e-08 62.8 74 41.9
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 2.2e-08 62.4 74 41.9
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 2.2e-08 62.4 74 44.6
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 2.9e-08 62.0 81 40.7
SEGI_02895 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 2.9e-08 62.0 82 43.9
SEGI_04472 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 2.9e-08 62.0 82 43.9
Atru.chr4.1598 Acer truncatum HOM05D003115 ORTHO05D003595 3.8e-08 61.6 74 41.9
CAN.G1155.21 Capsicum annuum HOM05D003115 ORTHO05D003595 5.0e-08 61.2 74 43.2
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 5.0e-08 61.2 74 43.2
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 6.5e-08 60.8 73 45.2
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 6.5e-08 60.8 74 44.6
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 6.5e-08 60.8 74 40.5
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 8.5e-08 60.5 74 37.8
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 8.5e-08 60.5 74 41.9
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 1.1e-07 60.1 74 40.5
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 1.1e-07 60.1 74 44.6
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 1.1e-07 60.1 74 39.2
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 1.5e-07 59.7 74 37.8
HPP92_007262 Vanilla planifolia HOM05D003115 ORTHO05D003595 1.5e-07 59.7 75 42.7
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 1.5e-07 59.7 74 41.9
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 1.9e-07 59.3 74 45.9
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 1.9e-07 59.3 74 43.2
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 2.5e-07 58.9 73 41.1
Psat0s3058g0040 Pisum sativum HOM05D003115 ORTHO05D003595 3.2e-07 58.5 73 37.0
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 3.2e-07 58.5 73 39.7
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 3.2e-07 58.5 74 44.6
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 4.2e-07 58.2 74 43.2
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 4.2e-07 58.2 74 40.5
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 4.2e-07 58.2 73 42.5
Cpa.g.sc83.40 Carica papaya HOM05D003115 ORTHO05D003595 5.5e-07 57.8 74 41.9
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 5.5e-07 57.8 85 37.6
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 5.5e-07 57.8 73 42.5
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 5.5e-07 57.8 83 41.0
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 7.2e-07 57.4 74 40.5
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 9.4e-07 57.0 75 45.3
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 9.4e-07 57.0 74 37.8
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 9.4e-07 57.0 84 36.9
SMO164G0231 Selaginella moellendorffii HOM05D003115 ORTHO05D003595 9.4e-07 57.0 79 44.3
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 9.4e-07 57.0 74 41.9
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 1.2e-06 56.6 74 37.8
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 1.2e-06 56.6 74 37.8
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 1.2e-06 56.6 74 41.9
PGSC0003DMG400007742 Solanum tuberosum HOM05D000005 ORTHO05D003595 1.2e-06 56.6 74 41.9
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 1.6e-06 56.2 74 37.8
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 1.6e-06 56.2 74 37.8
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.6e-06 56.2 84 40.5
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 2.1e-06 55.8 84 36.9
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 2.1e-06 55.8 84 38.1
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 2.1e-06 55.8 84 36.9
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 3.6e-06 55.1 74 41.9
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 3.6e-06 55.1 84 39.3
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 3.6e-06 55.1 84 39.3
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 3.6e-06 55.1 84 39.3
Rhsim02G0023500 Rhododendron simsii HOM05D003115 ORTHO05D003595 3.6e-06 55.1 74 36.5
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 6.1e-06 54.3 84 35.7
Cc00_g09570 Coffea canephora HOM05D003115 ORTHO05D003595 6.1e-06 54.3 74 37.8
Cc00_g27550 Coffea canephora HOM05D003115 ORTHO05D003595 6.1e-06 54.3 74 37.8
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 6.1e-06 54.3 83 36.1


User provided reference genes

Program Settings