Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 3.8e-97 358.2 186 100.0
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 3.0e-62 242.3 212 67.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.5e-26 122.5 210 38.1
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.7e-25 120.2 210 37.6
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.6e-23 112.5 180 38.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.1e-23 111.7 212 35.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.0e-22 109.4 211 38.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.0e-22 109.4 211 38.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.2e-21 107.5 187 39.6
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.5e-21 107.1 186 39.8
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.5e-21 107.1 180 37.8
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.4e-21 105.9 213 35.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.4e-21 105.9 210 38.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 3.4e-21 105.9 193 37.3
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 3.4e-21 105.9 212 36.8
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 4.4e-21 105.5 179 38.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.7e-21 105.1 179 36.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.7e-21 105.1 179 37.4
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 5.7e-21 105.1 179 37.4
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 5.7e-21 105.1 187 37.4
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 7.5e-21 104.8 180 36.7
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 9.8e-21 104.4 179 37.4
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 9.8e-21 104.4 210 36.7
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.3e-20 104.0 179 37.4
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-20 104.0 179 37.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.3e-20 104.0 179 37.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.3e-20 104.0 211 35.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.3e-20 104.0 179 38.0
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.7e-20 103.6 212 34.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.7e-20 103.6 180 37.8
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.7e-20 103.6 179 38.0
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.2e-20 103.2 210 35.7
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.2e-20 103.2 212 36.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.8e-20 102.8 193 37.3
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-20 102.8 193 37.3
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-20 102.8 193 37.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-20 102.8 193 37.3
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.8e-20 102.8 213 36.6
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.9
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.9
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 37.4
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.9
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.9
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.7e-20 102.4 211 34.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 3.7e-20 102.4 179 36.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.9e-20 102.1 187 36.9
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 4.9e-20 102.1 212 33.5
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 4.9e-20 102.1 187 37.4
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.9e-20 102.1 212 36.3
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 6.3e-20 101.7 179 36.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 6.3e-20 101.7 186 38.7
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 6.3e-20 101.7 211 34.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.3e-20 101.3 180 36.7
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.1e-19 100.9 187 37.4
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.4e-19 100.5 181 37.6
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.4e-19 100.5 179 36.3
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 2.4e-19 99.8 205 36.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.4e-19 99.8 219 34.7
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 2.4e-19 99.8 213 36.2
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.1e-19 99.4 187 36.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 3.1e-19 99.4 179 38.5
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 5.4e-19 98.6 180 35.6
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.0e-19 98.2 187 36.4
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 9.2e-19 97.8 187 37.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 9.2e-19 97.8 185 36.2
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.2e-18 97.4 179 34.6
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.6e-18 97.1 179 34.6
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.6e-18 97.1 179 34.6
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.6e-18 97.1 179 35.2
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 2.0e-18 96.7 186 35.5
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.0e-18 96.7 179 35.8
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.0e-18 96.7 210 34.3
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.0e-18 96.7 179 35.2
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.5e-18 95.9 213 33.3
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.5e-18 95.5 192 37.0
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.5e-18 95.5 212 32.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.5e-18 95.5 162 37.0
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 5.9e-18 95.1 179 36.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 7.8e-18 94.7 211 32.2
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-17 93.6 210 36.2
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.7e-17 93.6 188 35.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.3e-17 93.2 162 36.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 8.6e-17 91.3 183 33.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 8.6e-17 91.3 162 36.4
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-16 90.9 180 33.9
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.5e-16 90.5 203 32.5
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.9e-16 90.1 195 33.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.5e-16 89.7 184 33.7
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.8e-15 86.3 187 35.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.8e-15 86.3 187 35.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 4.7e-15 85.5 180 32.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.0e-14 84.3 211 33.2
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 5.2e-14 82.0 161 37.9
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 8.9e-14 81.3 152 36.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 8.9e-14 81.3 181 36.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.2e-13 80.9 164 36.0
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 2.4e-11 73.2 187 31.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 3.2e-11 72.8 147 35.4
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.3e-09 67.4 134 35.8
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 5.0e-09 65.5 211 30.3
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.5e-08 63.2 212 30.2
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.5e-08 63.2 141 30.5
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.2e-07 60.8 186 30.1
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.6e-07 59.3 85 41.2


User provided reference genes

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