Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.0e-112 410.2 228 100.0
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 2.5e-87 325.9 227 85.0
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 4.0e-40 169.1 116 75.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 5.2e-40 168.7 113 77.0
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 5.7e-39 165.2 113 75.2
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.7e-39 165.2 112 75.0
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.3e-38 164.1 115 72.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.7e-38 163.7 113 74.3
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.7e-38 163.7 109 79.8
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 2.8e-38 162.9 113 74.3
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.8e-38 162.9 113 74.3
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 3.7e-38 162.5 113 74.3
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 3.7e-38 162.5 113 73.5
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 8.3e-38 161.4 113 73.5
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 8.3e-38 161.4 113 73.5
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 8.3e-38 161.4 113 72.6
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 8.3e-38 161.4 114 72.8
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.1e-37 161.0 113 73.5
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.1e-37 161.0 113 73.5
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.4e-37 160.6 113 73.5
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.4e-37 160.6 113 72.6
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.8e-37 160.2 114 72.8
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.8e-37 160.2 113 74.3
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.8e-37 160.2 113 74.3
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.8e-37 160.2 113 74.3
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.8e-37 160.2 113 72.6
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 3.1e-37 159.5 113 73.5
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.1e-37 159.5 113 73.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 3.1e-37 159.5 113 73.5
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 4.1e-37 159.1 113 72.6
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 5.4e-37 158.7 110 74.5
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 5.4e-37 158.7 114 71.9
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 7.0e-37 158.3 113 72.6
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 7.0e-37 158.3 114 71.9
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 7.0e-37 158.3 114 71.9
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 7.0e-37 158.3 114 71.9
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 7.0e-37 158.3 114 71.9
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 7.0e-37 158.3 113 72.6
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 7.0e-37 158.3 113 72.6
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 7.0e-37 158.3 113 72.6
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 9.1e-37 157.9 114 71.9
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 9.1e-37 157.9 113 72.6
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 9.1e-37 157.9 110 74.5
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 9.1e-37 157.9 113 72.6
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 71.7
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 71.7
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 71.7
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 72.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.2e-36 157.5 110 74.5
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.2e-36 157.5 110 73.6
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 71.7
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.2e-36 157.5 113 71.7
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.2e-36 157.5 110 73.6
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.6e-36 157.1 113 72.6
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.6e-36 157.1 111 73.0
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.6e-36 157.1 113 71.7
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.6e-36 157.1 113 71.7
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.0e-36 156.8 113 72.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.0e-36 156.8 113 69.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.0e-36 156.8 113 71.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.0e-36 156.8 113 71.7
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 2.0e-36 156.8 111 73.9
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.7e-36 156.4 113 72.6
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.7e-36 156.4 113 72.6
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 2.7e-36 156.4 110 73.6
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 2.7e-36 156.4 110 71.8
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 3.5e-36 156.0 113 71.7
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 3.5e-36 156.0 113 70.8
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.5e-36 156.0 110 72.7
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.5e-36 156.0 110 72.7
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 3.5e-36 156.0 116 70.7
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.5e-36 156.0 113 70.8
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 3.5e-36 156.0 110 72.7
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 4.5e-36 155.6 113 71.7
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 4.5e-36 155.6 113 70.8
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 4.5e-36 155.6 111 71.2
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.9e-36 155.2 111 73.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 5.9e-36 155.2 113 70.8
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.9e-36 155.2 120 70.0
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.9e-36 155.2 112 73.2
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 5.9e-36 155.2 113 70.8
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 5.9e-36 155.2 113 69.9
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 71.7
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 7.7e-36 154.8 112 70.5
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 71.7
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 7.7e-36 154.8 110 71.8
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 7.7e-36 154.8 110 71.8
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 72.6
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 7.7e-36 154.8 110 71.8
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 70.8
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 70.8
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 70.8
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 7.7e-36 154.8 113 69.9
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.0e-35 154.5 113 70.8
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.0e-35 154.5 110 73.6
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.3e-35 154.1 113 69.9
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.7e-35 153.7 113 70.8
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.7e-35 153.7 113 70.8
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.7e-35 153.7 113 70.8
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.3e-35 153.3 113 69.9
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 2.3e-35 153.3 113 70.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.3e-35 153.3 112 72.3
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 2.3e-35 153.3 110 71.8
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.3e-35 153.3 113 70.8
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.9e-35 152.9 111 71.2
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.9e-35 152.9 111 71.2
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.9e-35 152.9 113 70.8
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 2.9e-35 152.9 113 69.9
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 3.8e-35 152.5 113 69.9
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 3.8e-35 152.5 113 69.9
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 3.8e-35 152.5 113 69.9
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 6.6e-35 151.8 121 68.6
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 6.6e-35 151.8 112 69.6
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 6.6e-35 151.8 113 69.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 6.6e-35 151.8 113 69.9
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 6.6e-35 151.8 113 69.9
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 6.6e-35 151.8 113 69.9
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 6.6e-35 151.8 113 69.9
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 6.6e-35 151.8 112 68.8
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 6.6e-35 151.8 112 68.8
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.6e-35 151.4 113 69.0
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.1e-34 151.0 112 69.6
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-34 151.0 113 69.0
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.5e-34 150.6 110 69.1
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.5e-34 150.6 112 67.9
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.5e-34 150.6 108 70.4
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 3.3e-34 149.4 112 68.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.3e-34 149.4 113 69.0
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.2e-34 149.1 113 69.0
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 4.2e-34 149.1 111 69.4
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 5.5e-34 148.7 110 70.0
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 5.5e-34 148.7 110 70.0
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 9.5e-34 147.9 107 71.0
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.0e-32 144.4 106 71.7
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.4e-32 144.1 107 68.2
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 3.0e-32 142.9 113 66.4
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 6.8e-32 141.7 103 71.8
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 2.6e-31 139.8 105 69.5
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 5.7e-31 138.7 110 66.4
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.4e-29 133.3 104 70.2
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 7.0e-29 131.7 146 52.7
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.6e-28 130.6 121 62.8
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.6e-28 130.6 93 72.0
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.1e-26 124.4 91 70.3
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 9.5e-26 121.3 105 59.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.2e-25 120.9 113 58.4
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.7e-25 119.0 110 58.2
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.8e-24 117.1 83 71.1
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.0e-24 115.9 113 57.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.0e-24 115.9 113 57.5
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 5.2e-24 115.5 111 59.5
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 2.6e-23 113.2 112 57.1
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 7.5e-23 111.7 109 53.2
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 1.3e-22 110.9 113 55.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 3.0e-19 99.8 78 66.7
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.1e-18 97.8 73 67.1
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.6e-15 86.7 101 55.4
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 5.8e-15 85.5 85 56.5
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-13 81.3 77 64.9
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.4e-13 80.9 78 60.3
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.9e-13 80.5 81 59.3
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 7.1e-13 78.6 77 63.6
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 7.1e-13 78.6 77 63.6
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-10 70.5 48 70.8
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-09 67.8 50 70.0
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.6e-09 66.2 44 75.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.2e-09 65.5 47 66.0
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 2.3e-08 63.5 47 72.3
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 9.9e-07 58.2 75 44.0
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.3e-06 57.8 36 80.6


User provided reference genes

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