Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g72677 Chara braunii HOM05D000101 ORTHO05D007021 8.1e-122 440.7 260 100.0
Cre07.g322250 Chlamydomonas reinhardtii HOM05D000101 ORTHO05D007021 5.2e-36 155.6 135 55.6
Pp3c13_8000 Physcomitrium patens HOM05D000101 ORTHO05D007021 1.7e-34 150.6 139 52.5
HPP92_017376 Vanilla planifolia HOM05D000101 ORTHO05D007021 1.1e-33 147.9 145 49.0
ATR0626G326 Amborella trichopoda HOM05D000101 ORTHO05D007021 1.8e-33 147.1 144 50.0
DCAR_002122 Daucus carota HOM05D000101 ORTHO05D007021 9.1e-33 144.8 151 47.7
Mapoly0016s0014 Marchantia polymorpha HOM05D000101 ORTHO05D007021 9.1e-33 144.8 140 48.6
unitig_22.g6178 Utricularia gibba HOM05D000101 ORTHO05D007021 2.0e-32 143.7 151 49.0
Glyma.07G235100 Glycine max HOM05D000101 ORTHO05D007021 2.7e-32 143.3 149 49.0
Manes.01G177200 Manihot esculenta HOM05D000101 ORTHO05D007021 2.7e-32 143.3 152 46.7
SEGI_13887 Sequoiadendron giganteum HOM05D000101 ORTHO05D007021 3.5e-32 142.9 138 52.9
Lj6g0006302 Lotus japonicus HOM05D000101 ORTHO05D007021 4.5e-32 142.5 150 48.0
Phvul.006G016500 Phaseolus vulgaris HOM05D000101 ORTHO05D007021 5.9e-32 142.1 150 49.3
VMungo0540G1253 Vigna mungo HOM05D000101 ORTHO05D007021 5.9e-32 142.1 150 49.3
AagrBONN_evm.TU.Sc2ySwM_228.724 Anthoceros agrestis HOM05D000101 ORTHO05D007021 7.7e-32 141.7 140 50.0
MSTRG.17651 Avicennia marina HOM05D000101 ORTHO05D007021 7.7e-32 141.7 151 47.7
BcaC02g12365 Brassica carinata HOM05D000101 ORTHO05D007021 7.7e-32 141.7 151 49.0
C04p04720 Brassica napus HOM05D000101 ORTHO05D007021 7.7e-32 141.7 151 49.0
BolC4t22102H Brassica oleracea HOM05D000101 ORTHO05D007021 7.7e-32 141.7 151 49.0
Glyma.20G043800 Glycine max HOM05D000101 ORTHO05D007021 7.7e-32 141.7 152 48.0
Lj2C98T13 Lonicera japonica HOM05D000101 ORTHO05D007021 1.0e-31 141.4 151 46.4
Lj6g0007250 Lotus japonicus HOM05D000101 ORTHO05D007021 1.0e-31 141.4 150 48.0
A05p03970 Brassica napus HOM05D000101 ORTHO05D007021 1.7e-31 140.6 149 49.7
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 1.7e-31 140.6 152 48.0
BraA05t19385Z Brassica rapa HOM05D000101 ORTHO05D007021 2.3e-31 140.2 149 49.7
Glyma.07G235000 Glycine max HOM05D000101 ORTHO05D007021 2.3e-31 140.2 149 47.7
Nn2g10490 Nelumbo nucifera HOM05D000101 ORTHO05D007021 2.3e-31 140.2 143 48.3
GSVIVG01037393001 Vitis vinifera HOM05D000101 ORTHO05D007021 2.3e-31 140.2 154 47.4
CAN.G65.208 Capsicum annuum HOM05D000101 ORTHO05D007021 2.9e-31 139.8 152 45.4
ECA234G3554 Erigeron canadensis HOM05D000101 ORTHO05D007021 2.9e-31 139.8 150 48.7
Migut.N02406 Erythranthe guttata HOM05D000101 ORTHO05D007021 2.9e-31 139.8 151 46.4
Rhsim13G0204000 Rhododendron simsii HOM05D000101 ORTHO05D007021 2.9e-31 139.8 152 47.4
PGSC0003DMG400005919 Solanum tuberosum HOM05D000101 ORTHO05D007021 2.9e-31 139.8 153 45.8
Lsat_1_v5_gn_5_88160 Lactuca sativa HOM05D000101 ORTHO05D007021 3.8e-31 139.4 141 51.1
Cc01_g07360 Coffea canephora HOM05D000101 ORTHO05D007021 5.0e-31 139.0 144 48.6
SMO119G0082 Selaginella moellendorffii HOM05D000101 ORTHO05D007021 5.0e-31 139.0 143 49.7
Sopen06g030030 Solanum pennellii HOM05D000101 ORTHO05D007021 5.0e-31 139.0 154 44.2
CDE04G1472 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 6.5e-31 138.7 137 50.4
Solyc06g073615.1 Solanum lycopersicum HOM05D000101 ORTHO05D007021 6.5e-31 138.7 154 44.2
Lj2C4T1 Lonicera japonica HOM05D000101 ORTHO05D007021 8.6e-31 138.3 151 45.0
Nitab4.5_0006265g0050 Nicotiana tabacum HOM05D000101 ORTHO05D007021 8.6e-31 138.3 152 45.4
Oeu041722.1 Olea europaea HOM05D000101 ORTHO05D007021 8.6e-31 138.3 149 47.0
SalBow3G0539 Salvia bowleyana HOM05D000101 ORTHO05D007021 8.6e-31 138.3 149 47.0
GSVIVG01037400001 Vitis vinifera HOM05D000101 ORTHO05D007021 8.6e-31 138.3 154 46.8
MBI16_g00843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 1.1e-30 137.9 156 46.8
PGR119G0271 Punica granatum HOM05D000101 ORTHO05D007021 1.5e-30 137.5 152 46.1
CDE06G1918 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 1.9e-30 137.1 137 49.6
Dinv29322 Davidia involucrata HOM05D000101 ORTHO05D007021 2.5e-30 136.7 152 47.4
Dinv29324 Davidia involucrata HOM05D000101 ORTHO05D007021 2.5e-30 136.7 152 47.4
Actinidia20391 Actinidia chinensis HOM05D000101 ORTHO05D007021 3.3e-30 136.3 148 46.6
Lalb_Chr06g0173421 Lupinus albus HOM05D000101 ORTHO05D007021 3.3e-30 136.3 150 46.7
Nitab4.5_0000271g0210 Nicotiana tabacum HOM05D000101 ORTHO05D007021 3.3e-30 136.3 152 44.7
SGA_v2.0_scaffold13G06395 Striga asiatica HOM05D000101 ORTHO05D007021 3.3e-30 136.3 145 46.9
Aa31LG1G25480 Aethionema arabicum HOM05D000101 ORTHO05D007021 4.2e-30 136.0 151 46.4
AT2G43760 Arabidopsis thaliana HOM05D000101 ORTHO05D007021 4.2e-30 136.0 148 47.3
Eucgr.J00668 Eucalyptus grandis HOM05D000101 ORTHO05D007021 4.2e-30 136.0 151 45.7
Gohir.A08G009100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 4.2e-30 136.0 138 49.3
Sed0019464 Sechium edule HOM05D000101 ORTHO05D007021 4.2e-30 136.0 135 49.6
Sc06g0003480 Simmondsia chinensis HOM05D000101 ORTHO05D007021 4.2e-30 136.0 151 47.0
SGA_v2.0_scaffold79G25529 Striga asiatica HOM05D000101 ORTHO05D007021 4.2e-30 136.0 145 46.2
A04p33060 Brassica napus HOM05D000101 ORTHO05D007021 5.5e-30 135.6 148 47.3
BraA04t18766Z Brassica rapa HOM05D000101 ORTHO05D007021 5.5e-30 135.6 148 47.3
Ca_25981_v3 Cicer arietinum L. HOM05D000101 ORTHO05D007021 5.5e-30 135.6 151 47.0
Duzib170G0394 Durio zibethinus HOM05D000101 ORTHO05D007021 5.5e-30 135.6 141 48.2
Potri.001G272100 Populus trichocarpa HOM05D000101 ORTHO05D007021 5.5e-30 135.6 152 46.1
COL.COLO4_33246 Corchorus olitorius HOM05D000101 ORTHO05D007021 7.2e-30 135.2 152 45.4
Os02g0140300 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 7.2e-30 135.2 149 46.3
Peaxi162Scf00526g00083 Petunia axillaris HOM05D000101 ORTHO05D007021 7.2e-30 135.2 152 45.4
Thecc.09G252400 Theobroma cacao HOM05D000101 ORTHO05D007021 7.2e-30 135.2 152 46.1
TAR383G0810 Trochodendron aralioides HOM05D000101 ORTHO05D007021 7.2e-30 135.2 156 44.2
CARHR138950 Cardamine hirsuta HOM05D000101 ORTHO05D007021 9.5e-30 134.8 145 47.6
Cpa.g.sc9.381 Carica papaya HOM05D000101 ORTHO05D007021 9.5e-30 134.8 148 47.3
CiPaw.13G147800 Carya illinoinensis HOM05D000101 ORTHO05D007021 9.5e-30 134.8 152 46.1
QL01p016256 Quercus lobata HOM05D000101 ORTHO05D007021 1.2e-29 134.4 152 46.1
TWI79G1559 Tripterygium wilfordii HOM05D000101 ORTHO05D007021 1.2e-29 134.4 139 49.6
Duzib150G0203 Durio zibethinus HOM05D000101 ORTHO05D007021 1.6e-29 134.0 152 45.4
Duzib150G0818 Durio zibethinus HOM05D000101 ORTHO05D007021 1.6e-29 134.0 152 45.4
TPR.G11957 Trifolium pratense HOM05D000101 ORTHO05D007021 1.6e-29 134.0 138 49.3
TAR383G0318 Trochodendron aralioides HOM05D000101 ORTHO05D007021 1.6e-29 134.0 148 45.3
Carub.0004s2629 Capsella rubella HOM05D000101 ORTHO05D007021 2.1e-29 133.7 148 46.6
Thhalv10001567m.g Eutrema salsugineum HOM05D000101 ORTHO05D007021 2.1e-29 133.7 146 48.6
Psat5g198640 Pisum sativum HOM05D000101 ORTHO05D007021 2.1e-29 133.7 138 47.8
Haze_23275 Corylus avellana HOM05D000101 ORTHO05D007021 2.8e-29 133.3 152 45.4
HanXRQChr10g0307811 Helianthus annuus HOM05D000101 ORTHO05D007021 2.8e-29 133.3 150 46.7
Sp4g25830 Schrenkiella parvula HOM05D000101 ORTHO05D007021 2.8e-29 133.3 144 47.9
AL4G42630 Arabidopsis lyrata HOM05D000101 ORTHO05D007021 3.6e-29 132.9 148 46.6
EL10Ac4g10078 Beta vulgaris HOM05D000101 ORTHO05D007021 3.6e-29 132.9 152 44.7
Ciclev10016806m.g Citrus clementina HOM05D000101 ORTHO05D007021 3.6e-29 132.9 152 45.4
CSS0002182 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D007021 6.1e-29 132.1 146 47.3
Gorai.001G132800 Gossypium raimondii HOM05D000101 ORTHO05D007021 6.1e-29 132.1 152 44.7
RcHm_v2.0_Chr2g0110001 Rosa chinensis HOM05D000101 ORTHO05D007021 6.1e-29 132.1 152 46.7
Ah.06g194870 Amaranthus hybridus HOM05D000101 ORTHO05D007021 8.0e-29 131.7 152 44.7
Aqoxy2G03523 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 8.0e-29 131.7 166 43.4
CANSAT54G0276 Cannabis sativa HOM05D000101 ORTHO05D007021 8.0e-29 131.7 146 45.2
Zm00001eb208120 Zea mays HOM05D000101 ORTHO05D007021 8.0e-29 131.7 143 46.2
Gohir.D08G019100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 1.0e-28 131.3 152 44.7
Gorai.004G013600 Gossypium raimondii HOM05D000101 ORTHO05D007021 1.0e-28 131.3 152 44.7
Medtr8g036270 Medicago truncatula HOM05D000101 ORTHO05D007021 1.0e-28 131.3 138 48.6
PSO675G1036 Papaver somniferum HOM05D000101 ORTHO05D007021 1.0e-28 131.3 144 45.8
QL01p016239 Quercus lobata HOM05D000101 ORTHO05D007021 1.0e-28 131.3 152 44.7
ClCG02G022620 Citrullus lanatus HOM05D000101 ORTHO05D007021 1.4e-28 131.0 148 44.6
Prupe.4G269700 Prunus persica HOM05D000101 ORTHO05D007021 1.4e-28 131.0 152 46.1
Medtr3g041720 Medicago truncatula HOM05D000101 ORTHO05D007021 1.8e-28 130.6 138 48.6
AUR62000226 Chenopodium quinoa HOM05D000101 ORTHO05D007021 2.3e-28 130.2 151 45.0
CsaV3_6G038720 Cucumis sativus L. HOM05D000101 ORTHO05D007021 2.3e-28 130.2 135 47.4
PSO017G1758 Papaver somniferum HOM05D000101 ORTHO05D007021 2.3e-28 130.2 135 47.4
FvH4_1g18980 Fragaria vesca HOM05D000101 ORTHO05D007021 4.0e-28 129.4 148 45.9
FAN28G0419 Fragaria x ananassa HOM05D000101 ORTHO05D007021 4.0e-28 129.4 148 45.9
THA.LOC104808404 Tarenaya hassleriana HOM05D000101 ORTHO05D007021 4.0e-28 129.4 152 44.7
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 6.8e-28 128.6 144 47.2
MBI15_g46843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 6.8e-28 128.6 152 44.1
MELO3C014535.2 Cucumis melo HOM05D000101 ORTHO05D007021 1.2e-27 127.9 144 44.4
MCO04G049 Micromonas commoda HOM05D000101 ORTHO05D007021 4.4e-27 125.9 140 48.6
SHI24924 Sapria himalayana HOM05D000101 ORTHO05D007021 1.8e-25 120.6 137 43.8
SGA_v2.0_scaffold52G19230 Striga asiatica HOM05D000101 ORTHO05D007021 1.6e-24 117.5 122 47.5
BcaC02g07150 Brassica carinata HOM05D000101 ORTHO05D007021 5.0e-23 112.5 148 42.6
Gohir.D07G123100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 5.2e-20 102.4 120 44.2
Lsat_1_v5_gn_5_88140 Lactuca sativa HOM05D000101 ORTHO05D007021 1.5e-19 100.9 141 41.8
Gohir.A07G118800 Gossypium hirsutum HOM05D000101 ORTHO05D007021 3.4e-19 99.8 119 42.9
PRCOL_00006009 Prasinoderma coloniale HOM05D000101 ORTHO05D007021 2.9e-18 96.7 159 39.6
Atru.chr5.404 Acer truncatum HOM05D000101 ORTHO05D007021 2.4e-17 93.6 94 52.1
Aqoxy102s002 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 6.0e-16 89.0 94 48.9
AUR62006572 Chenopodium quinoa HOM05D000101 ORTHO05D007021 8.6e-15 85.1 151 33.8
Atru.chr3.2842 Acer truncatum HOM05D000101 ORTHO05D007021 2.3e-12 77.0 84 45.2
Cfa024344 Carpinus fangiana HOM05D000101 ORTHO05D007021 6.8e-12 75.5 100 39.0
Sabra16G0167400 Salix brachista HOM05D000101 ORTHO05D007021 1.7e-10 70.9 67 55.2
Oeu046204.1 Olea europaea HOM05D000101 ORTHO05D007021 6.4e-10 68.9 88 39.8
GSVIVG01027252001 Vitis vinifera HOM05D000101 ORTHO05D007021 3.5e-08 63.2 59 52.5
BcaC01g02229 Brassica carinata HOM05D000101 ORTHO05D007021 1.1e-06 58.2 133 30.1
C04p70760 Brassica napus HOM05D000101 ORTHO05D007021 5.6e-06 55.8 148 29.7
BolC4t28578H Brassica oleracea HOM05D000101 ORTHO05D007021 5.6e-06 55.8 148 29.7
BcaB02g08903 Brassica carinata HOM05D005622 ORTHO05D002854 7.3e-06 55.5 116 32.8


User provided reference genes

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