Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g72433 Chara braunii HOM05D000819 ORTHO05D000661 1.3e-94 349.7 175 100.0
CBR_g713 Chara braunii HOM05D000819 ORTHO05D000661 8.9e-24 114.4 88 63.6
Mapoly0070s0038 Marchantia polymorpha HOM05D000819 ORTHO05D000661 4.1e-13 79.0 90 42.2
AagrBONN_evm.TU.Sc2ySwM_228.3055 Anthoceros agrestis HOM05D000819 ORTHO05D000661 2.7e-12 76.3 93 41.9
SEGI_33113 Sequoiadendron giganteum HOM05D000819 ORTHO05D000661 6.0e-12 75.1 91 48.4
Manes.17G056700 Manihot esculenta HOM05D000819 ORTHO05D000661 1.5e-10 70.5 90 40.0
QL05p047523 Quercus lobata HOM05D000819 ORTHO05D000661 1.9e-10 70.1 90 42.2
TAR626G1665 Trochodendron aralioides HOM05D000819 ORTHO05D000661 2.5e-10 69.7 90 41.1
SEGI_24950 Sequoiadendron giganteum HOM05D000819 ORTHO05D000661 3.3e-10 69.3 90 42.2
TAR624G1269 Trochodendron aralioides HOM05D000819 ORTHO05D000661 5.6e-10 68.6 90 42.2
Ca_00443_v3 Cicer arietinum L. HOM05D000819 ORTHO05D000661 7.3e-10 68.2 90 38.9
Pp3c27_300 Physcomitrium patens HOM05D000819 ORTHO05D000661 7.3e-10 68.2 99 37.4
Potri.011G067300 Populus trichocarpa HOM05D000819 ORTHO05D000661 1.2e-09 67.4 90 38.9
TAR627G0922 Trochodendron aralioides HOM05D000819 ORTHO05D000661 1.6e-09 67.0 90 42.2
Potri.004G058000 Populus trichocarpa HOM05D000819 ORTHO05D000661 6.2e-09 65.1 90 37.8
SEGI_09585 Sequoiadendron giganteum HOM05D000819 ORTHO05D000661 6.2e-09 65.1 94 42.6
DCAR_013275 Daucus carota HOM05D000819 ORTHO05D000661 1.4e-08 63.9 89 38.2
Nn1g09173 Nelumbo nucifera HOM05D000819 ORTHO05D000661 1.4e-08 63.9 89 39.3
Pp3c16_7770 Physcomitrium patens HOM05D000819 ORTHO05D000661 1.4e-08 63.9 95 38.9
ATR1120G010 Amborella trichopoda HOM05D000819 ORTHO05D000661 1.8e-08 63.5 98 39.8
ATR0602G007 Amborella trichopoda HOM05D000819 ORTHO05D000661 3.1e-08 62.8 93 40.9
VMungo0540G1309 Vigna mungo HOM05D000819 ORTHO05D000661 3.1e-08 62.8 90 37.8
Aqoxy4G00318 Aquilegia oxysepala HOM05D000819 ORTHO05D000661 4.0e-08 62.4 90 38.9
CiPaw.10G059900 Carya illinoinensis HOM05D000819 ORTHO05D000661 4.0e-08 62.4 90 35.6
Sabra11G0048700 Salix brachista HOM05D000819 ORTHO05D000661 4.0e-08 62.4 90 36.7
Dinv40691 Davidia involucrata HOM05D000819 ORTHO05D000661 5.2e-08 62.0 90 38.9
Manes.16G040800 Manihot esculenta HOM05D000819 ORTHO05D000661 5.2e-08 62.0 90 37.8
Nn1g04440 Nelumbo nucifera HOM05D000819 ORTHO05D000661 6.8e-08 61.6 90 38.9
Thecc.06G169200 Theobroma cacao HOM05D000819 ORTHO05D000661 6.8e-08 61.6 90 37.8
Dinv01706 Davidia involucrata HOM05D000819 ORTHO05D000661 8.9e-08 61.2 89 37.1
Zm00001eb152530 Zea mays HOM05D000819 ORTHO05D000661 1.5e-07 60.5 90 34.4
Prupe.1G521700 Prunus persica HOM05D000819 ORTHO05D000661 2.0e-07 60.1 92 32.6
SEGI_22097 Sequoiadendron giganteum HOM05D000819 ORTHO05D000661 2.6e-07 59.7 92 39.1
Actinidia10951 Actinidia chinensis HOM05D000819 ORTHO05D000661 3.4e-07 59.3 89 37.1
AT5G15120 Arabidopsis thaliana HOM05D000819 ORTHO05D000661 3.4e-07 59.3 92 37.0
Rhsim06G0130500 Rhododendron simsii HOM05D000819 ORTHO05D000661 3.4e-07 59.3 89 36.0
GSVIVG01021226001 Vitis vinifera HOM05D000819 ORTHO05D000661 3.4e-07 59.3 90 37.8
Zm00001eb370560 Zea mays HOM05D000819 ORTHO05D000661 3.4e-07 59.3 90 34.4
Zm00001eb433180 Zea mays HOM05D000819 ORTHO05D000661 3.4e-07 59.3 106 34.0
Phvul.006G175200 Phaseolus vulgaris HOM05D000819 ORTHO05D000661 4.4e-07 58.9 90 33.3
Peaxi162Scf00469g00413 Petunia axillaris HOM05D000819 ORTHO05D000661 5.8e-07 58.5 90 37.8
Cfa000620 Carpinus fangiana HOM05D000819 ORTHO05D000661 7.6e-07 58.2 92 39.1
Thhalv10014207m.g Eutrema salsugineum HOM05D000819 ORTHO05D000661 7.6e-07 58.2 92 40.2
Glyma.15G083700 Glycine max HOM05D000819 ORTHO05D000661 7.6e-07 58.2 90 35.6
Aa31LG9G1690 Aethionema arabicum HOM05D000819 ORTHO05D000661 9.9e-07 57.8 128 33.6
AL6G25940 Arabidopsis lyrata HOM05D000819 ORTHO05D000661 9.9e-07 57.8 92 37.0
Pp3c6_9330 Physcomitrium patens HOM05D000819 ORTHO05D000661 9.9e-07 57.8 92 38.0
Psat1g197760 Pisum sativum HOM05D000819 ORTHO05D000661 9.9e-07 57.8 90 35.6
Sed0027538 Sechium edule HOM05D000819 ORTHO05D000661 9.9e-07 57.8 90 35.6
Hund21170 Selenicereus undatus HOM05D000819 ORTHO05D000661 9.9e-07 57.8 90 34.4
Sc17g0005710 Simmondsia chinensis HOM05D000819 ORTHO05D000661 9.9e-07 57.8 90 36.7
THA.LOC104812123 Tarenaya hassleriana HOM05D000819 ORTHO05D000661 9.9e-07 57.8 87 35.6
arahy.Tifrunner.gnm1.ann1.5Z1ZDF Arachis hypogaea HOM05D000819 ORTHO05D000661 1.3e-06 57.4 89 34.8
MBI07_g09565_MAGBIO Magnolia biondii HOM05D000819 ORTHO05D000661 1.3e-06 57.4 90 34.4
MSTRG.6786 Avicennia marina HOM05D000819 ORTHO05D000661 1.7e-06 57.0 89 38.2
MBI01_g12900_MAGBIO Magnolia biondii HOM05D000819 ORTHO05D000661 1.7e-06 57.0 95 41.1
Nn5g30020 Nelumbo nucifera HOM05D000819 ORTHO05D000661 1.7e-06 57.0 87 36.8
Oeu053237.1 Olea europaea HOM05D000819 ORTHO05D000661 1.7e-06 57.0 90 37.8
Ca_18869_v3 Cicer arietinum L. HOM05D000819 ORTHO05D000661 2.2e-06 56.6 86 38.4
DCAR_009774 Daucus carota HOM05D000819 ORTHO05D000661 2.2e-06 56.6 89 36.0
CAN.G1081.9 Capsicum annuum HOM05D000819 ORTHO05D000661 2.9e-06 56.2 90 38.9
Gorai.012G046000 Gossypium raimondii HOM05D000819 ORTHO05D000661 2.9e-06 56.2 86 37.2
Hma1.2p1_0178F.1_g078730 Hydrangea macrophylla HOM05D000819 ORTHO05D000661 2.9e-06 56.2 89 36.0
Lj6g0026632 Lotus japonicus HOM05D000819 ORTHO05D000661 3.8e-06 55.8 92 35.9
Manes.18G065100 Manihot esculenta HOM05D000819 ORTHO05D000661 3.8e-06 55.8 89 33.7
Nitab4.5_0000249g0190 Nicotiana tabacum HOM05D000819 ORTHO05D000661 3.8e-06 55.8 90 36.7
Nitab4.5_0004409g0040 Nicotiana tabacum HOM05D000819 ORTHO05D000661 3.8e-06 55.8 90 36.7
Rhsim04G0074800 Rhododendron simsii HOM05D000819 ORTHO05D000661 3.8e-06 55.8 89 36.0
HPP92_021766 Vanilla planifolia HOM05D000819 ORTHO05D000661 3.8e-06 55.8 91 34.1
CsaV3_6G015320 Cucumis sativus L. HOM05D000819 ORTHO05D000661 4.9e-06 55.5 86 36.0
Prupe.4G062500 Prunus persica HOM05D000819 ORTHO05D000661 4.9e-06 55.5 89 37.1
AT1G18490 Arabidopsis thaliana HOM05D000819 ORTHO05D000661 6.4e-06 55.1 88 36.4
CiPaw.03G194800 Carya illinoinensis HOM05D000819 ORTHO05D000661 6.4e-06 55.1 86 36.0
Glyma.13G228800 Glycine max HOM05D000819 ORTHO05D000661 6.4e-06 55.1 90 34.4
Nn1g05434 Nelumbo nucifera HOM05D000819 ORTHO05D000661 6.4e-06 55.1 86 32.6
Sopen07g027070 Solanum pennellii HOM05D000819 ORTHO05D000661 6.4e-06 55.1 89 37.1
Thecc.01G152000 Theobroma cacao HOM05D000819 ORTHO05D000661 6.4e-06 55.1 86 36.0
TWI60G0359 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 6.4e-06 55.1 117 34.2
AL1G30930 Arabidopsis lyrata HOM05D000819 ORTHO05D000661 8.4e-06 54.7 88 35.2
CARHR019110 Cardamine hirsuta HOM05D000819 ORTHO05D000661 8.4e-06 54.7 88 36.4
ClCG02G017880 Citrullus lanatus HOM05D000819 ORTHO05D000661 8.4e-06 54.7 86 36.0
Duzib147G1317 Durio zibethinus HOM05D000819 ORTHO05D000661 8.4e-06 54.7 86 36.0
GSVIVG01008048001 Vitis vinifera HOM05D000819 ORTHO05D000661 8.4e-06 54.7 92 37.0


User provided reference genes

Program Settings