Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 0.0e+00 1360.5 701 100.0
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 9.6e-45 186.0 552 31.3
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 1.3e-44 185.7 529 31.0
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 3.9e-38 164.1 454 31.9
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 2.6e-34 151.4 271 37.6
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 6.5e-33 146.7 263 35.0
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 6.5e-33 146.7 263 35.0
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 3.2e-32 144.4 330 31.2
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 4.2e-32 144.1 239 36.8
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 5.5e-32 143.7 424 28.1
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 5.5e-32 143.7 239 36.8
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 5.5e-32 143.7 239 36.8
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 5.5e-32 143.7 269 34.9
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 5.5e-32 143.7 336 31.2
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.1e-31 141.7 269 34.6
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 3.6e-31 141.0 435 28.0
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 4.6e-31 140.6 237 34.2
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 4.6e-31 140.6 365 31.5
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 6.1e-31 140.2 244 35.7
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 7.9e-31 139.8 239 35.6
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 7.9e-31 139.8 339 30.1
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 7.9e-31 139.8 228 37.7
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.0e-30 139.4 367 30.5
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.4e-30 139.0 237 35.9
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 1.4e-30 139.0 383 30.5
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 1.8e-30 138.7 239 35.6
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 2.3e-30 138.3 248 35.1
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 2.3e-30 138.3 255 35.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.0e-30 137.9 269 33.8
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 8.8e-30 136.3 239 35.1
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 8.8e-30 136.3 239 35.1
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 8.8e-30 136.3 250 35.6
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 8.8e-30 136.3 261 34.9
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 1.5e-29 135.6 475 27.2
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.5e-29 135.6 357 29.7
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 5.7e-29 133.7 244 34.4
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 5.7e-29 133.7 265 34.3
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 9.7e-29 132.9 238 35.3
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 1.3e-28 132.5 250 34.8
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.7e-28 132.1 244 34.0
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 1.7e-28 132.1 330 31.2
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 2.8e-28 131.3 259 34.7
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 2.8e-28 131.3 363 30.6
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 2.8e-28 131.3 441 29.9
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 2.8e-28 131.3 156 42.9
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 3.7e-28 131.0 263 34.2
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 3.7e-28 131.0 242 35.5
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 4.8e-28 130.6 261 32.6
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 8.2e-28 129.8 251 35.5
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 4.1e-27 127.5 251 35.5
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 4.1e-27 127.5 241 35.3
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 1.2e-26 125.9 262 33.2
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 2.0e-26 125.2 246 35.0
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 2.0e-26 125.2 391 30.4
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 3.4e-26 124.4 339 30.4
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 1.3e-25 122.5 348 27.9
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 8.5e-25 119.8 166 40.4
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 1.4e-24 119.0 245 34.3
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 1.9e-24 118.6 358 27.1
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 1.9e-24 118.6 474 24.3
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 1.9e-24 118.6 242 31.8
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 5.5e-24 117.1 246 32.9
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 9.4e-24 116.3 276 31.5
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 1.2e-23 115.9 330 28.2
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 2.1e-23 115.2 358 27.1
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 2.1e-23 115.2 330 27.9
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 2.7e-23 114.8 350 28.3
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.8e-22 112.1 250 34.0
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.8e-22 112.1 249 31.3
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 1.8e-22 112.1 237 35.0
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 2.3e-22 111.7 182 36.3
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 3.0e-22 111.3 379 26.6
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 3.9e-22 110.9 249 32.5
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 5.1e-22 110.5 150 38.7
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 6.7e-22 110.2 262 31.3
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 8.8e-22 109.8 244 32.0
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 8.8e-22 109.8 247 31.2
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 1.1e-21 109.4 244 31.1
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 2.0e-21 108.6 147 41.5
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.0e-21 108.6 153 39.9
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 2.6e-21 108.2 252 32.1
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 5.7e-21 107.1 242 32.6
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 7.4e-21 106.7 390 25.6
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 7.4e-21 106.7 150 40.0
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 9.7e-21 106.3 171 39.2
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.7e-20 105.5 221 34.4
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-20 105.1 269 30.9
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 2.8e-20 104.8 246 29.3
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 4.8e-20 104.0 246 30.1
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 8.2e-20 103.2 244 30.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.2e-20 103.2 386 27.2
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.2e-20 103.2 386 27.2
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 1.4e-19 102.4 235 33.2
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 1.4e-19 102.4 235 33.2
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 7.0e-19 100.1 256 29.3
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 1.2e-18 99.4 342 28.4
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 1.6e-18 99.0 180 37.8
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 3.5e-18 97.8 153 38.6
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 5.9e-18 97.1 237 30.0
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 7.7e-18 96.7 169 34.9
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 7.7e-18 96.7 169 34.9
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 7.7e-18 96.7 221 31.2
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 1.3e-17 95.9 372 26.9
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 1.9e-16 92.0 271 28.8
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 5.5e-16 90.5 248 27.0
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 2.7e-15 88.2 260 30.0
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 2.7e-15 88.2 157 34.4
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 4.7e-15 87.4 244 28.3
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 8.0e-15 86.7 141 36.9
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 1.0e-14 86.3 244 27.9
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.4e-14 85.9 234 30.8
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 1.4e-14 85.9 169 34.3
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.8e-14 85.5 239 27.2
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 5.2e-14 84.0 331 26.0
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 2.6e-13 81.6 136 34.6
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 1.7e-12 79.0 153 34.6
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 1.2e-10 72.8 116 36.2
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 5.9e-10 70.5 158 28.5
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 1.3e-09 69.3 155 28.4
MCO01G175 Micromonas commoda HOM05D004964 ORTHO05D005918 9.4e-08 63.2 260 23.5
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 9.4e-08 63.2 106 35.8
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 1.2e-07 62.8 128 33.6
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.6e-07 61.2 128 32.0
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 3.6e-07 61.2 106 33.0
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 1.4e-06 59.3 212 26.4
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 3.0e-06 58.2 211 22.7


User provided reference genes

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