Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.0e-176 623.6 391 100.0
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 9.6e-18 95.5 149 35.6
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 6.9e-16 89.4 165 33.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.5e-15 88.2 158 34.8
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 2.6e-15 87.4 145 33.8
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.4e-15 87.0 158 34.2
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 4.4e-15 86.7 138 34.8
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 4.4e-15 86.7 151 32.5
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.3e-14 85.1 147 32.7
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.7e-14 84.7 156 31.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.7e-14 84.7 136 35.3
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.2e-14 84.3 134 47.0
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.9e-14 84.0 153 33.3
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 3.8e-14 83.6 151 31.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 6.4e-14 82.8 148 32.4
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 6.4e-14 82.8 136 33.8
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 8.4e-14 82.4 137 34.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 8.4e-14 82.4 134 34.3
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 8.4e-14 82.4 152 33.6
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 8.4e-14 82.4 136 33.8
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 8.4e-14 82.4 151 31.8
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.1e-13 82.0 138 32.6
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.4e-13 81.6 144 32.6
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.4e-13 81.6 152 32.2
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.9e-13 81.3 137 32.8
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.4e-13 80.9 151 33.8
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 2.4e-13 80.9 154 31.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.4e-13 80.9 149 32.2
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 2.4e-13 80.9 136 33.8
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 5.4e-13 79.7 137 34.3
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 5.4e-13 79.7 143 32.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 7.1e-13 79.3 137 31.4
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.2e-12 78.6 137 32.8
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 1.6e-12 78.2 160 56.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.1e-12 77.8 136 32.4
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.1e-12 77.8 136 32.4
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 2.1e-12 77.8 157 30.6
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 2.1e-12 77.8 145 31.7
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 2.7e-12 77.4 138 32.6
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.7e-12 77.4 136 31.6
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.7e-12 77.4 136 30.1
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 2.7e-12 77.4 142 31.7
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 3.5e-12 77.0 138 31.9
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 3.5e-12 77.0 136 32.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 4.6e-12 76.6 138 31.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 4.6e-12 76.6 149 32.2
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 4.6e-12 76.6 149 32.2
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 4.6e-12 76.6 137 30.7
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 6.0e-12 76.3 133 32.3
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 6.0e-12 76.3 141 31.2
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 6.0e-12 76.3 137 32.1
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 7.8e-12 75.9 137 31.4
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.0e-11 75.5 141 30.5
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.3e-11 75.1 165 30.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.7e-11 74.7 138 31.2
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.7e-11 74.7 138 30.4
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.7e-11 74.7 133 33.1
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.7e-11 74.7 133 36.1
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.7e-11 74.7 144 31.9
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-11 74.3 136 30.1
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-11 74.3 136 30.1
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 3.9e-11 73.6 138 29.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.9e-11 73.6 138 29.7
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 3.9e-11 73.6 138 29.7
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.9e-11 73.6 138 29.7
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 3.9e-11 73.6 136 30.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 3.9e-11 73.6 144 31.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.9e-11 73.6 144 31.2
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 3.9e-11 73.6 133 35.3
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 3.9e-11 73.6 136 31.6
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.1e-11 73.2 136 32.4
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 5.1e-11 73.2 174 30.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 6.6e-11 72.8 138 29.7
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 6.6e-11 72.8 138 29.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 6.6e-11 72.8 136 30.9
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.6e-11 72.8 144 31.2
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 6.6e-11 72.8 148 31.1
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 6.6e-11 72.8 136 30.9
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 6.6e-11 72.8 138 29.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 8.7e-11 72.4 133 30.1
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 8.7e-11 72.4 149 30.2
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 8.7e-11 72.4 138 30.4
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 8.7e-11 72.4 138 30.4
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 8.7e-11 72.4 136 30.1
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.5e-10 71.6 138 29.7
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.5e-10 71.6 138 29.7
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.9e-10 71.2 144 30.6
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.9e-10 71.2 144 30.6
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 4.3e-10 70.1 136 28.7
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 5.6e-10 69.7 140 30.7
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 2.8e-09 67.4 124 33.1
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 3.6e-09 67.0 138 29.0
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 8.1e-09 65.9 135 27.4
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.4e-08 65.1 137 35.8
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.6e-07 60.8 54 48.1
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.4e-07 60.5 59 45.8
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 5.8e-07 59.7 138 29.7
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 7.6e-07 59.3 59 44.1
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 7.6e-07 59.3 59 44.1
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 7.6e-07 59.3 59 44.1
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.7e-06 58.2 59 44.1
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 3.8e-06 57.0 59 42.4
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 8.4e-06 55.8 59 40.7


User provided reference genes

Program Settings