Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 0.0e+00 2951.4 1675 100.0
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 1.1e-17 97.4 138 33.3
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.2e-16 94.0 140 33.6
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 2.0e-16 93.2 138 30.4
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 2.7e-16 92.8 154 33.8
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 3.5e-16 92.4 139 33.1
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 1.0e-15 90.9 140 32.9
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.3e-15 90.5 138 30.4
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 1.3e-15 90.5 138 30.4
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 1.7e-15 90.1 138 31.2
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 2.2e-15 89.7 139 33.1
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 2.2e-15 89.7 141 34.0
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 2.2e-15 89.7 151 35.1
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 2.9e-15 89.4 140 31.4
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 3.8e-15 89.0 141 34.0
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 5.0e-15 88.6 139 31.7
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 5.0e-15 88.6 138 29.0
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 6.5e-15 88.2 143 34.3
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 1.5e-14 87.0 138 31.2
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 1.5e-14 87.0 152 27.6
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 1.9e-14 86.7 225 28.4
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 2.5e-14 86.3 141 31.9
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 2.5e-14 86.3 138 29.7
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 2.5e-14 86.3 141 30.5
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 2.5e-14 86.3 152 30.9
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 3.2e-14 85.9 140 33.6
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 7.2e-14 84.7 140 32.9
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 7.2e-14 84.7 141 32.6
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 7.2e-14 84.7 138 28.3
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 7.2e-14 84.7 141 29.1
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 7.2e-14 84.7 141 31.9
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 9.4e-14 84.3 141 28.4
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 9.4e-14 84.3 138 27.5
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.6e-13 83.6 138 28.3
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 2.1e-13 83.2 138 30.4
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 2.1e-13 83.2 139 30.9
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 2.7e-13 82.8 138 27.5
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 2.7e-13 82.8 138 31.2
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 2.7e-13 82.8 138 31.2
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 2.7e-13 82.8 138 31.2
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 2.7e-13 82.8 185 24.9
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 3.6e-13 82.4 138 31.9
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 3.6e-13 82.4 139 30.9
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 3.6e-13 82.4 138 28.3
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 3.6e-13 82.4 140 31.4
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 4.7e-13 82.0 138 28.3
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 4.7e-13 82.0 134 29.9
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 6.1e-13 81.6 139 30.9
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 1.0e-12 80.9 149 32.2
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.0e-12 80.9 139 30.9
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 1.4e-12 80.5 138 29.0
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 1.8e-12 80.1 139 33.1
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 1.8e-12 80.1 138 27.5
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 1.8e-12 80.1 138 29.7
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 2.3e-12 79.7 138 29.7
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 2.3e-12 79.7 140 30.0
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 2.3e-12 79.7 138 28.3
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 3.0e-12 79.3 138 31.2
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 4.0e-12 79.0 138 26.8
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 8.8e-12 77.8 138 29.0
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 1.5e-11 77.0 138 26.1
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.6e-11 76.3 140 30.7
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 2.6e-11 76.3 188 22.9
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 4.4e-11 75.5 138 26.1
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 4.4e-11 75.5 188 22.9
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 4.4e-11 75.5 138 29.7
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 7.5e-11 74.7 230 27.4
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 7.5e-11 74.7 138 27.5
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.7e-10 73.6 139 30.9
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 2.2e-10 73.2 145 28.3
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 4.8e-10 72.0 205 27.3
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 8.3e-10 71.2 224 26.3
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.1e-09 70.9 201 26.9
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 1.8e-09 70.1 204 27.5
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 1.8e-09 70.1 138 25.4
Hma1.2p1_0499F.1_g166820 Hydrangea macrophylla HOM05D005682 ORTHO05D007050 2.4e-09 69.7 202 28.2
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 4.1e-09 68.9 120 28.3
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 5.4e-09 68.6 201 27.9
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 7.0e-09 68.2 201 26.9
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 9.1e-09 67.8 201 28.4
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.2e-08 67.4 224 26.8
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 2.0e-08 66.6 201 25.4
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 2.0e-08 66.6 684 21.2
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 2.7e-08 66.2 230 23.5
CSS0031646 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 7.7e-08 64.7 282 24.5
Dinv11710 Davidia involucrata HOM05D005682 ORTHO05D007050 1.0e-07 64.3 203 28.1
HPP92_008567 Vanilla planifolia HOM05D005682 ORTHO05D007050 2.9e-07 62.8 203 27.1
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 6.6e-07 61.6 257 24.5
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.1e-06 60.8 205 25.9
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 2.5e-06 59.7 236 23.7
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 3.3e-06 59.3 205 27.8
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 4.2e-06 58.9 201 25.4
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 9.5e-06 57.8 220 25.0


User provided reference genes

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