Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 0.0e+00 3036.9 1587 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 2.6e-287 993.0 889 58.3
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 9.5e-274 948.0 875 56.8
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 4.0e-272 942.6 883 57.0
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 8.6e-259 898.3 894 54.6
SEGI_05562 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 1.8e-131 475.3 423 57.0
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 2.4e-120 438.3 773 37.0
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 1.8e-115 422.2 376 58.2
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 1.3e-113 416.0 831 35.5
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 1.5e-82 312.8 825 30.8
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 1.4e-62 246.5 278 49.6
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 4.4e-61 241.5 668 30.4
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 8.3e-60 237.3 188 63.3
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 5.0e-57 228.0 172 66.3
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 2.5e-56 225.7 209 57.4
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 7.2e-56 224.2 183 61.2
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 2.3e-54 219.2 223 52.9
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 6.8e-54 217.6 186 60.2
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 6.8e-54 217.6 175 62.3
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 6.8e-54 217.6 194 57.2
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 2.0e-53 216.1 178 59.6
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 1.3e-52 213.4 196 59.7
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 5.9e-50 204.5 174 59.2
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 7.7e-50 204.1 192 55.2
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.7e-49 203.0 174 58.6
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 7.3e-48 197.6 177 53.1
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 1.3e-44 186.8 152 60.5
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 9.8e-37 160.6 127 64.6
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 8.3e-36 157.5 129 62.0
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.9e-35 156.4 128 61.7
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 1.9e-35 156.4 127 63.8
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 2.4e-35 156.0 130 60.0
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 3.2e-35 155.6 129 59.7
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 2.3e-33 149.4 149 51.7
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 4.3e-32 145.2 145 55.9
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 4.3e-32 145.2 164 51.2
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 5.6e-32 144.8 126 60.3
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 5.6e-32 144.8 135 57.8
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 1.1e-30 140.6 119 63.0
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 1.5e-29 136.7 155 51.6
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 4.9e-28 131.7 107 61.7
SEGI_08517 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 4.1e-27 128.6 128 47.7
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 6.0e-26 124.8 133 53.4
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 1.0e-25 124.0 107 60.7
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 3.9e-25 122.1 140 47.1
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 1.4e-22 113.6 105 58.1
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 2.3e-22 112.8 155 43.2
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 6.8e-22 111.3 93 59.1
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 1.1e-16 94.0 131 42.0
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 1.2e-13 84.0 104 43.3
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.2e-13 84.0 66 59.1
Pp3s92_20 Physcomitrium patens HOM05D001287 ORTHO05D001226 4.9e-12 78.6 352 25.9
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 2.7e-10 72.8 59 55.9
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 3.5e-10 72.4 62 53.2
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 7.8e-10 71.2 60 53.3
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 1.9e-08 66.6 47 66.0
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 2.5e-08 66.2 60 50.0
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 2.5e-08 66.2 46 67.4
SEGI_39238 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 5.3e-06 58.5 72 44.4


User provided reference genes

Program Settings