Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 9.7e-95 350.1 177 100.0
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 4.0e-40 168.7 144 54.9
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 6.6e-35 151.4 162 46.9
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 7.6e-31 137.9 136 45.6
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.3e-30 137.1 141 45.4
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.4e-24 116.3 137 41.6
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.6e-23 112.8 148 39.9
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 5.8e-23 111.7 122 45.9
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 5.8e-23 111.7 134 41.0
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 5.8e-23 111.7 137 40.9
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.2e-22 109.8 134 41.0
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.2e-22 109.8 140 37.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.9e-22 109.4 137 39.4
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.8e-22 109.0 129 38.0
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 4.9e-22 108.6 170 36.5
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 4.9e-22 108.6 137 39.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.9e-22 108.6 121 42.1
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.5e-22 108.2 120 41.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 8.4e-22 107.8 121 41.3
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.1e-21 107.5 134 41.8
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.1e-21 107.5 121 41.3
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.4e-21 107.1 138 40.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-21 107.1 118 39.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.5e-21 106.3 137 38.7
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 3.2e-21 105.9 130 41.5
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 3.2e-21 105.9 137 40.1
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.2e-21 105.9 121 40.5
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.2e-21 105.9 128 41.4
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.2e-21 105.9 142 34.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.2e-21 105.5 121 41.3
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.2e-21 105.5 121 41.3
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 4.2e-21 105.5 134 40.3
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 4.2e-21 105.5 119 38.7
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 5.5e-21 105.1 137 38.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 5.5e-21 105.1 121 39.7
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 5.5e-21 105.1 121 41.3
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 7.1e-21 104.8 138 40.6
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.3e-21 104.4 137 37.2
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 9.3e-21 104.4 133 41.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 9.3e-21 104.4 133 41.4
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 9.3e-21 104.4 133 41.4
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 9.3e-21 104.4 133 41.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 9.3e-21 104.4 140 37.9
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.2e-20 104.0 123 38.2
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.2e-20 104.0 158 35.4
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.2e-20 104.0 148 36.5
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.6e-20 103.6 137 38.0
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.1e-20 103.2 121 38.8
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.1e-20 103.2 131 38.9
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 2.1e-20 103.2 134 39.6
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.7e-20 102.8 137 38.0
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.7e-20 102.8 121 39.7
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.7e-20 102.8 121 39.7
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.7e-20 102.8 126 41.3
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.5e-20 102.4 121 38.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.5e-20 102.4 121 38.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 3.5e-20 102.4 121 42.1
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.5e-20 102.4 121 40.5
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.5e-20 102.4 134 40.3
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.5e-20 102.4 142 33.8
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.5e-20 102.4 142 33.8
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 4.6e-20 102.1 119 39.5
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 6.0e-20 101.7 160 38.8
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 6.0e-20 101.7 121 38.8
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 6.0e-20 101.7 130 40.0
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.0e-19 100.9 126 41.3
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.0e-19 100.9 164 32.3
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.3e-19 100.5 121 40.5
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.8e-19 100.1 121 40.5
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.8e-19 100.1 121 39.7
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.8e-19 100.1 140 34.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.8e-19 100.1 138 37.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.3e-19 99.8 134 36.6
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 3.0e-19 99.4 121 38.0
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 5.1e-19 98.6 121 37.2
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 5.1e-19 98.6 121 38.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 5.1e-19 98.6 121 38.0
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 8.7e-19 97.8 134 38.1
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 8.7e-19 97.8 140 33.6
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.1e-18 97.4 137 36.5
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.1e-18 97.4 127 37.0
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.1e-18 97.4 121 38.0
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.5e-18 97.1 121 38.0
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.5e-18 97.1 143 33.6
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 2.5e-18 96.3 140 33.6
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 3.3e-18 95.9 140 33.6
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 3.3e-18 95.9 140 34.3
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.3e-18 95.9 121 38.0
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 5.7e-18 95.1 124 36.3
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 5.7e-18 95.1 139 35.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 9.6e-18 94.4 121 37.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.3e-17 94.0 119 37.0
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.8e-17 92.0 171 32.7
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.2e-17 91.3 108 39.8
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.4e-16 90.5 101 42.6
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.1e-16 89.4 121 34.7
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.6e-15 86.3 120 36.7
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.7e-14 83.6 105 36.2
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 6.5e-14 81.6 155 36.1
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 4.2e-13 79.0 121 35.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 7.2e-13 78.2 138 34.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.2e-12 77.4 92 40.2
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.1e-12 76.6 193 26.9
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 7.9e-12 74.7 90 35.6
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.9e-11 72.4 103 39.8
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 8.7e-11 71.2 96 36.5
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.7e-11 71.2 88 35.2
MCO01G471 Micromonas commoda HOM05D006513 ORTHO05D008150 1.5e-10 70.5 129 34.9
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.7e-10 68.6 77 44.2
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.6e-09 67.0 82 43.9


User provided reference genes

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