Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 6.3e-87 323.9 148 100.0
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 1.1e-54 216.9 148 64.2
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.7e-52 209.5 146 58.9
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 2.2e-52 209.1 147 66.0
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 3.2e-51 205.3 147 60.5
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 5.5e-51 204.5 147 61.2
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 5.5e-51 204.5 147 59.9
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 5.5e-51 204.5 147 59.9
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 5.5e-51 204.5 147 59.9
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 7.2e-51 204.1 147 60.5
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 9.4e-51 203.8 147 59.2
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 9.4e-51 203.8 145 62.8
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.2e-50 203.4 147 59.2
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 1.2e-50 203.4 147 59.2
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.6e-50 203.0 147 59.9
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 2.7e-50 202.2 144 60.4
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 2.7e-50 202.2 145 59.3
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 2.7e-50 202.2 147 59.9
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 2.7e-50 202.2 145 58.6
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 3.6e-50 201.8 147 59.9
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 8.0e-50 200.7 145 59.3
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 8.0e-50 200.7 145 62.1
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 1.4e-49 199.9 145 57.9
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 1.4e-49 199.9 145 57.9
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 1.4e-49 199.9 147 58.5
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 1.4e-49 199.9 147 58.5
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.8e-49 199.5 147 58.5
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.8e-49 199.5 145 57.9
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 2.3e-49 199.1 144 57.6
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 2.3e-49 199.1 145 58.6
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.3e-49 199.1 147 59.2
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.3e-49 199.1 147 59.2
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 3.0e-49 198.7 148 58.1
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 3.0e-49 198.7 148 58.1
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 3.0e-49 198.7 147 59.2
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 3.0e-49 198.7 144 59.0
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 3.0e-49 198.7 145 57.9
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 4.0e-49 198.4 145 58.6
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 4.0e-49 198.4 147 59.2
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 5.2e-49 198.0 147 57.8
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 5.2e-49 198.0 147 58.5
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 5.2e-49 198.0 147 57.1
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 6.8e-49 197.6 147 57.8
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 1.5e-48 196.4 147 57.1
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 1.5e-48 196.4 147 57.8
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 2.0e-48 196.1 147 57.1
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 2.0e-48 196.1 147 56.5
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 3.4e-48 195.3 145 55.9
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 3.4e-48 195.3 146 55.5
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 3.4e-48 195.3 147 58.5
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 3.4e-48 195.3 147 57.8
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 4.4e-48 194.9 147 57.1
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 4.4e-48 194.9 144 57.6
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 4.4e-48 194.9 147 58.5
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 4.4e-48 194.9 147 59.2
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 4.4e-48 194.9 144 58.3
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 5.7e-48 194.5 145 57.2
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 7.5e-48 194.1 147 57.8
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 7.5e-48 194.1 144 57.6
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 7.5e-48 194.1 147 56.5
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 9.8e-48 193.7 147 56.5
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 1.3e-47 193.4 147 55.8
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.3e-47 193.4 144 56.9
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.3e-47 193.4 144 56.9
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 1.3e-47 193.4 143 58.7
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 1.7e-47 193.0 147 57.8
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 1.7e-47 193.0 147 55.8
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.7e-47 193.0 144 56.2
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.2e-47 192.6 147 57.1
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 2.2e-47 192.6 147 55.8
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 3.7e-47 191.8 144 56.9
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 4.8e-47 191.4 147 55.1
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 4.8e-47 191.4 147 55.1
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 4.8e-47 191.4 147 55.1
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 4.8e-47 191.4 147 55.1
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 1.1e-46 190.3 144 57.6
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 2.4e-46 189.1 144 56.9
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 3.1e-46 188.7 147 55.8
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 4.1e-46 188.3 147 53.7
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 9.1e-46 187.2 142 54.9
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 1.2e-45 186.8 144 55.6
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 1.2e-45 186.8 153 54.9
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 7.7e-45 184.1 134 56.7
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 2.3e-44 182.6 143 56.6
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 5.0e-44 181.4 144 54.2
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 5.0e-44 181.4 143 56.6
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 6.5e-44 181.0 144 56.2
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 8.6e-44 180.6 147 53.7
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 3.3e-43 178.7 147 52.4
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 1.8e-41 172.9 147 53.1
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 4.4e-40 168.3 122 54.1
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 1.1e-38 163.7 131 52.7
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 4.5e-37 158.3 115 60.0
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 8.6e-36 154.1 158 46.8
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.9e-35 152.9 147 49.7
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.5e-35 152.5 147 49.0
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 1.5e-32 143.3 142 46.5
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.9e-30 136.3 95 58.9
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 5.0e-28 128.3 94 58.5
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 3.7e-23 112.1 122 40.2
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 3.5e-21 105.5 74 62.2
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 4.3e-19 98.6 145 38.6
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.3e-15 87.0 67 49.3
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 1.2e-13 80.5 54 59.3
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 1.7e-12 76.6 52 59.6
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 5.1e-12 75.1 57 56.1
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 1.2e-10 70.5 51 62.7
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 5.2e-09 65.1 49 59.2
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 1.7e-07 60.1 47 57.4


User provided reference genes

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