Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 1.8e-180 636.0 349 100.0
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.2e-32 144.8 153 49.7
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 2.7e-32 143.7 153 47.7
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 4.7e-32 142.9 153 46.4
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 8.0e-32 142.1 153 47.7
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 1.0e-31 141.7 153 45.8
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 1.8e-31 141.0 153 47.7
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 2.3e-31 140.6 154 48.7
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 2.3e-31 140.6 154 48.7
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 8.8e-31 138.7 153 47.1
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.1e-30 138.3 154 48.1
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.1e-30 138.3 154 47.4
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 1.5e-30 137.9 154 48.1
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 2.0e-30 137.5 154 47.4
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 4.4e-30 136.3 145 49.0
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 9.7e-30 135.2 113 56.6
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 1.3e-29 134.8 116 58.6
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 1.7e-29 134.4 110 58.2
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 1.7e-29 134.4 110 58.2
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 1.7e-29 134.4 110 58.2
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 2.2e-29 134.0 162 46.3
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 2.2e-29 134.0 110 56.4
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 2.2e-29 134.0 170 46.5
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 2.2e-29 134.0 170 42.4
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 2.8e-29 133.7 113 55.8
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.8e-29 133.7 110 57.3
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.8e-29 133.7 113 56.6
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 3.7e-29 133.3 114 54.4
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 3.7e-29 133.3 165 42.4
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 4.8e-29 132.9 130 51.5
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 4.8e-29 132.9 130 53.1
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 4.8e-29 132.9 130 53.1
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 6.3e-29 132.5 113 55.8
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 6.3e-29 132.5 159 44.7
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 8.2e-29 132.1 153 44.4
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 8.2e-29 132.1 125 52.0
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 1.1e-28 131.7 169 42.6
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.1e-28 131.7 151 45.7
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.4e-28 131.3 154 43.5
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.4e-28 131.3 128 50.8
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 1.4e-28 131.3 154 43.5
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.8e-28 131.0 113 55.8
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 1.8e-28 131.0 111 56.8
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 1.8e-28 131.0 166 42.2
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 2.4e-28 130.6 140 48.6
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 2.4e-28 130.6 119 51.3
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 2.4e-28 130.6 113 54.9
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 2.4e-28 130.6 113 54.9
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 2.4e-28 130.6 113 54.0
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.1e-28 130.2 154 44.2
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.1e-28 130.2 154 44.2
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 3.1e-28 130.2 110 57.3
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 3.1e-28 130.2 113 54.9
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 3.1e-28 130.2 162 43.2
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 3.1e-28 130.2 150 46.7
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 4.1e-28 129.8 113 53.1
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 4.1e-28 129.8 113 53.1
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 7.0e-28 129.0 113 54.9
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 9.1e-28 128.6 113 54.9
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 9.1e-28 128.6 110 53.6
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 9.1e-28 128.6 129 51.2
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 9.1e-28 128.6 113 54.0
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 9.1e-28 128.6 111 54.1
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 9.1e-28 128.6 169 40.2
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 1.6e-27 127.9 108 53.7
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 1.6e-27 127.9 141 45.4
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 2.0e-27 127.5 157 42.7
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 2.0e-27 127.5 152 44.1
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 2.0e-27 127.5 114 51.8
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.0e-27 127.5 110 52.7
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 2.6e-27 127.1 113 52.2
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 2.6e-27 127.1 108 53.7
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 2.6e-27 127.1 110 54.5
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 2.6e-27 127.1 113 53.1
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.6e-27 127.1 111 54.1
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 3.5e-27 126.7 101 59.4
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 3.5e-27 126.7 108 54.6
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 3.5e-27 126.7 108 54.6
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 4.5e-27 126.3 124 48.4
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 4.5e-27 126.3 153 44.4
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 4.5e-27 126.3 111 53.2
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 4.5e-27 126.3 110 54.5
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 5.9e-27 125.9 118 50.0
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 5.9e-27 125.9 113 51.3
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 5.9e-27 125.9 111 54.1
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 5.9e-27 125.9 126 48.4
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 5.9e-27 125.9 141 46.8
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 5.9e-27 125.9 110 53.6
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 7.7e-27 125.6 113 51.3
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.7e-26 124.4 113 52.2
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 1.7e-26 124.4 110 53.6
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 1.7e-26 124.4 110 53.6
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 2.2e-26 124.0 163 42.3
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 2.2e-26 124.0 150 44.7
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 2.9e-26 123.6 110 51.8
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 5.0e-26 122.9 111 51.4
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 1.1e-25 121.7 115 52.2
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 1.5e-25 121.3 184 39.7
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 1.5e-25 121.3 110 50.9
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 2.5e-25 120.6 114 49.1
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 3.2e-25 120.2 110 50.0
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 2.7e-24 117.1 99 53.5
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 3.6e-24 116.7 100 55.0
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.8e-23 114.4 177 38.4
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 4.8e-21 106.3 107 49.5
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 9.1e-20 102.1 144 41.0
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 6.1e-16 89.4 77 53.2
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 8.8e-15 85.5 150 36.7
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 1.3e-13 81.6 116 41.4
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 2.7e-11 73.9 125 35.2
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 2.7e-11 73.9 88 43.2
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.3e-10 71.6 103 37.9
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 4.7e-08 63.2 65 44.6
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 5.2e-07 59.7 61 49.2
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.0e-06 57.8 79 44.3
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 2.6e-06 57.4 100 35.0
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 5.7e-06 56.2 44 56.8
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 5.7e-06 56.2 57 45.6


User provided reference genes

Program Settings