Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 4.5e-261 904.0 451 100.0
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 7.6e-144 514.6 412 61.9
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.3e-143 513.8 413 62.2
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.1e-142 510.8 413 61.7
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.4e-142 510.4 412 61.4
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.2e-141 507.3 414 60.9
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 2.7e-141 506.1 414 60.6
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 6.0e-141 505.0 407 60.9
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 7.9e-141 504.6 407 60.9
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.0e-140 504.2 409 61.4
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.0e-140 504.2 411 61.6
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.3e-140 503.8 411 60.6
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.8e-140 503.4 414 61.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.8e-140 503.4 415 60.5
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.9e-140 502.3 410 61.7
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 3.9e-140 502.3 414 60.1
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.1e-140 501.9 405 62.5
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 6.7e-140 501.5 411 61.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.1e-139 500.7 413 60.5
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.1e-139 500.7 411 61.3
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.5e-139 500.4 411 61.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.5e-139 500.4 411 60.6
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.5e-139 500.4 405 61.7
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 2.5e-139 499.6 412 61.2
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.3e-139 499.2 405 62.5
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.3e-139 499.2 405 62.5
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 3.3e-139 499.2 406 62.6
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.3e-139 499.2 413 60.5
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 4.3e-139 498.8 405 61.5
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.3e-139 498.8 413 61.3
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 5.6e-139 498.4 402 62.2
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 5.6e-139 498.4 419 60.4
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 7.4e-139 498.0 404 61.6
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 7.4e-139 498.0 404 61.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 9.6e-139 497.7 405 62.0
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.3e-138 497.3 402 61.9
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.3e-138 497.3 407 61.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.6e-138 496.9 404 61.4
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.6e-138 496.9 406 61.8
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.6e-138 496.9 404 61.9
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.6e-138 496.9 405 62.0
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 2.1e-138 496.5 414 60.1
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.8e-138 496.1 405 61.5
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 3.7e-138 495.7 407 60.9
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.7e-138 495.7 405 61.5
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 6.2e-138 495.0 411 61.1
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 6.2e-138 495.0 405 61.2
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 6.2e-138 495.0 404 61.4
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 8.2e-138 494.6 411 59.6
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.1e-137 494.2 406 61.1
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.4e-137 493.8 404 60.9
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.4e-137 493.0 407 60.9
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.4e-137 493.0 407 61.4
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 4.0e-137 492.3 407 61.4
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 4.0e-137 492.3 412 60.4
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 9.0e-137 491.1 403 61.5
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 9.0e-137 491.1 407 61.2
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.2e-136 490.7 412 60.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.5e-136 490.3 405 60.7
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.5e-136 490.3 403 61.5
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.5e-136 490.3 404 61.4
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.5e-136 490.3 406 61.1
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.5e-136 490.3 404 61.1
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.5e-136 490.3 402 60.9
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 2.0e-136 490.0 404 61.6
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.6e-136 489.6 426 58.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.5e-136 488.8 451 56.5
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 5.8e-136 488.4 404 60.6
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 5.8e-136 488.4 406 61.1
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 5.8e-136 488.4 412 60.2
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 7.6e-136 488.0 406 60.8
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.3e-135 487.3 420 58.8
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.9e-135 486.1 411 58.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.9e-135 486.1 433 57.7
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 6.5e-135 485.0 407 59.2
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 8.4e-135 484.6 404 60.1
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.1e-134 484.2 405 60.0
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.1e-134 484.2 432 56.9
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.4e-134 483.8 420 59.3
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.5e-134 483.0 410 58.5
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.5e-133 479.2 410 57.6
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 3.5e-133 479.2 402 58.7
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.9e-131 473.4 406 58.4
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 4.8e-130 468.8 420 58.1
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.4e-129 467.2 471 53.7
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 9.0e-129 464.5 374 62.0
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.9e-127 459.5 377 60.7
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 6.5e-127 458.4 374 61.5
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.2e-125 454.1 405 58.8
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.0e-124 451.1 406 56.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.3e-122 444.1 402 57.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 1.1e-121 441.0 423 53.7
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.4e-121 440.7 411 56.2
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 3.2e-118 429.5 289 70.2
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.2e-117 427.6 354 61.6
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.6e-117 426.0 413 54.2
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 7.9e-117 424.9 290 69.0
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.0e-116 424.5 417 54.7
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 6.7e-116 421.8 354 61.0
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.3e-115 419.5 292 67.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 5.9e-112 408.7 404 54.0
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 2.4e-105 386.7 264 67.8
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.2e-103 380.2 407 50.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.2e-98 363.6 407 50.4
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.7e-96 356.7 245 68.2
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.5e-96 356.3 237 70.5
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.5e-96 356.3 237 70.5
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.4e-92 344.4 241 68.9
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.8e-92 341.7 339 52.2
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.3e-87 327.0 301 56.5
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 6.1e-77 292.4 354 47.7
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-72 278.1 413 40.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.6e-72 277.7 318 43.4
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 3.3e-62 243.4 329 41.3
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.7e-55 221.1 415 34.5
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.9e-52 208.8 347 36.3
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.4e-51 206.8 342 35.1
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 4.2e-49 199.9 270 46.3
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.5e-46 190.7 304 38.8
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-42 177.6 356 31.7
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 6.2e-29 132.9 84 71.4
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 3.8e-26 123.6 94 67.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 8.4e-26 122.5 84 64.3
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.6e-21 108.2 140 46.4
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.6e-16 90.1 51 70.6
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.6e-13 81.6 124 41.1
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.9e-12 76.3 122 41.8
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 9.4e-09 65.9 45 71.1
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 3.6e-08 63.9 159 29.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 7.4e-06 56.2 50 58.0


User provided reference genes

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