Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g60258 Chara braunii HOM05D004246 ORTHO05D005035 3.2e-165 585.1 315 100.0
CBR_g39061 Chara braunii HOM05D004246 ORTHO05D005035 3.4e-143 511.9 313 88.8
CBR_g38143 Chara braunii HOM05D004246 ORTHO05D005035 6.4e-73 278.5 313 51.8
CBR_g38136 Chara braunii HOM05D004246 ORTHO05D005035 7.3e-69 265.0 316 50.0
CBR_g52291 Chara braunii HOM05D004246 ORTHO05D005035 3.8e-65 252.7 310 49.7
Mapoly0003s0299 Marchantia polymorpha HOM05D004246 ORTHO05D005035 3.2e-40 169.9 302 40.4
BolC8t47183H Brassica oleracea HOM05D004246 ORTHO05D005035 1.2e-31 141.4 304 33.6
BcaC07g37017 Brassica carinata HOM05D004246 ORTHO05D005035 3.6e-31 139.8 304 33.2
C08p03840 Brassica napus HOM05D004246 ORTHO05D005035 4.7e-31 139.4 304 33.2
A08p03640 Brassica napus HOM05D004246 ORTHO05D005035 6.1e-31 139.0 304 32.9
BraA08t32395Z Brassica rapa HOM05D004246 ORTHO05D005035 6.1e-31 139.0 304 32.9
CARHR039720 Cardamine hirsuta HOM05D004246 ORTHO05D005035 3.9e-30 136.3 304 30.6
Hund00330 Selenicereus undatus HOM05D004246 ORTHO05D005035 1.5e-29 134.4 304 32.2
Aa31LG10G4360 Aethionema arabicum HOM05D004246 ORTHO05D005035 7.4e-29 132.1 304 30.9
AL1G57080 Arabidopsis lyrata HOM05D004246 ORTHO05D005035 7.4e-29 132.1 304 30.6
AT1G49670 Arabidopsis thaliana HOM05D004246 ORTHO05D005035 9.7e-29 131.7 304 30.9
Thhalv10011316m.g Eutrema salsugineum HOM05D004246 ORTHO05D005035 9.7e-29 131.7 304 31.2
THA.LOC104811359 Tarenaya hassleriana HOM05D004246 ORTHO05D005035 1.3e-28 131.3 304 31.6
unitig_0.g82 Utricularia gibba HOM05D004246 ORTHO05D006311 1.7e-28 131.0 305 29.5
BcaB04g17303 Brassica carinata HOM05D004246 ORTHO05D005035 3.7e-28 129.8 304 30.3
C06p04490 Brassica napus HOM05D004246 ORTHO05D005035 3.7e-28 129.8 305 31.5
BolC6t35579H Brassica oleracea HOM05D004246 ORTHO05D005035 3.7e-28 129.8 305 31.5
Duzib052G0814 Durio zibethinus HOM05D004246 ORTHO05D005035 4.8e-28 129.4 304 31.2
A06p03710 Brassica napus HOM05D004246 ORTHO05D005035 8.2e-28 128.6 305 30.5
BraA06t23576Z Brassica rapa HOM05D004246 ORTHO05D005035 1.4e-27 127.9 305 31.1
Zm00001eb315030 Zea mays HOM05D004246 ORTHO05D005035 1.4e-27 127.9 302 32.8
Carub.0001s3887 Capsella rubella HOM05D004246 ORTHO05D005035 1.8e-27 127.5 304 30.3
MBI06_g24641_MAGBIO Magnolia biondii HOM05D004246 ORTHO05D005035 1.8e-27 127.5 304 31.2
Phvul.003G295600 Phaseolus vulgaris HOM05D004246 ORTHO05D005035 2.4e-27 127.1 304 30.6
Ca_18675_v3 Cicer arietinum L. HOM05D004246 ORTHO05D005035 4.1e-27 126.3 304 30.6
Sp1g36530 Schrenkiella parvula HOM05D004246 ORTHO05D005035 4.1e-27 126.3 304 29.6
SMO347G0217 Selaginella moellendorffii HOM05D004246 ORTHO05D005035 4.1e-27 126.3 301 32.6
vmacro02201 Vaccinium macrocarpon HOM05D004246 ORTHO05D005035 4.1e-27 126.3 302 30.8
VMungo0251G0360 Vigna mungo HOM05D004246 ORTHO05D005035 4.1e-27 126.3 304 30.6
Cc02_g18690 Coffea canephora HOM05D004246 ORTHO05D005035 5.3e-27 125.9 304 31.2
PSO541G5332 Papaver somniferum HOM05D004246 ORTHO05D005035 5.3e-27 125.9 303 31.7
BcaB07g33648 Brassica carinata HOM05D004246 ORTHO05D005035 9.1e-27 125.2 304 29.9
PSO675G5061 Papaver somniferum HOM05D004246 ORTHO05D005035 1.5e-26 124.4 303 31.4
Glyma.02G133500 Glycine max HOM05D004246 ORTHO05D005035 2.0e-26 124.0 304 30.6
Lj4g0006121 Lotus japonicus HOM05D004246 ORTHO05D005035 2.0e-26 124.0 304 30.6
Gohir.D01G006700 Gossypium hirsutum HOM05D004246 ORTHO05D005035 3.4e-26 123.2 304 30.3
Gorai.002G007700 Gossypium raimondii HOM05D004246 ORTHO05D005035 3.4e-26 123.2 304 30.3
Gorai.002G007800 Gossypium raimondii HOM05D004246 ORTHO05D005035 3.4e-26 123.2 304 31.2
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 4.5e-26 122.9 304 29.9
AagrBONN_evm.TU.Sc2ySwM_344.2262 Anthoceros agrestis HOM05D004246 ORTHO05D005035 4.5e-26 122.9 304 29.9
Gohir.D13G038200 Gossypium hirsutum HOM05D004246 ORTHO05D005035 4.5e-26 122.9 304 31.6
Os09g0459800 Oryza sativa ssp. japonica HOM05D004246 ORTHO05D005035 4.5e-26 122.9 302 31.1
Peaxi162Scf00152g00028 Petunia axillaris HOM05D004246 ORTHO05D005035 4.5e-26 122.9 305 29.8
Actinidia00448 Actinidia chinensis HOM05D004246 ORTHO05D005035 5.9e-26 122.5 302 30.5
Solyc01g108150.3 Solanum lycopersicum HOM05D004246 ORTHO05D005035 5.9e-26 122.5 304 28.6
Sopen01g050380 Solanum pennellii HOM05D004246 ORTHO05D005035 5.9e-26 122.5 304 28.6
Gorai.013G042800 Gossypium raimondii HOM05D004246 ORTHO05D005035 7.7e-26 122.1 304 31.6
Zm00001eb315020 Zea mays HOM05D004246 ORTHO05D005035 7.7e-26 122.1 301 30.6
COL.COLO4_32668 Corchorus olitorius HOM05D004246 ORTHO05D005035 1.0e-25 121.7 304 29.6
Gohir.D01G006800 Gossypium hirsutum HOM05D004246 ORTHO05D005035 1.0e-25 121.7 304 30.9
HanXRQChr16g0508451 Helianthus annuus HOM05D004246 ORTHO05D005035 1.0e-25 121.7 302 29.8
SGA_v2.0_scaffold90G27668 Striga asiatica HOM05D004246 ORTHO05D005035 1.7e-25 120.9 305 29.5
ATR0100G011 Amborella trichopoda HOM05D004246 ORTHO05D005035 2.2e-25 120.6 304 29.3
Pp3c11_25890 Physcomitrium patens HOM05D004246 ORTHO05D005035 2.2e-25 120.6 297 30.6
CAN.G1041.24 Capsicum annuum HOM05D004246 ORTHO05D005035 2.9e-25 120.2 305 29.2
Gohir.A01G006700 Gossypium hirsutum HOM05D004246 ORTHO05D005035 2.9e-25 120.2 304 30.6
Lj5A208G42 Lonicera japonica HOM05D004246 ORTHO05D005035 2.9e-25 120.2 304 28.9
Medtr4g086410 Medicago truncatula HOM05D004246 ORTHO05D005035 2.9e-25 120.2 304 29.3
SalBow6G2555 Salvia bowleyana HOM05D004246 ORTHO05D005035 2.9e-25 120.2 304 28.9
Migut.B00335 Erythranthe guttata HOM05D004246 ORTHO05D005035 5.0e-25 119.4 305 29.5
MSTRG.20150 Avicennia marina HOM05D004246 ORTHO05D005035 6.5e-25 119.0 305 29.5
CANSAT25G1021 Cannabis sativa HOM05D004246 ORTHO05D005035 6.5e-25 119.0 304 29.3
Ciclev10028010m.g Citrus clementina HOM05D004246 ORTHO05D005035 6.5e-25 119.0 304 29.6
AUR62016619 Chenopodium quinoa HOM05D004246 ORTHO05D005035 8.5e-25 118.6 304 29.6
Eucgr.G01451 Eucalyptus grandis HOM05D004246 ORTHO05D005035 8.5e-25 118.6 302 29.8
SMO356G0365 Selaginella moellendorffii HOM05D004246 ORTHO05D005035 8.5e-25 118.6 302 28.5
PGSC0003DMG400025890 Solanum tuberosum HOM05D004246 ORTHO05D005035 8.5e-25 118.6 304 28.6
Eucgr.G01453 Eucalyptus grandis HOM05D004246 ORTHO05D005035 1.1e-24 118.2 302 31.1
Gohir.A13G039600 Gossypium hirsutum HOM05D004246 ORTHO05D005035 1.1e-24 118.2 304 31.2
Ah.01g020200 Amaranthus hybridus HOM05D004246 ORTHO05D005035 1.4e-24 117.9 304 29.3
RcHm_v2.0_Chr6g0256921 Rosa chinensis HOM05D004246 ORTHO05D005035 1.4e-24 117.9 304 28.0
Thecc.02G099400 Theobroma cacao HOM05D004246 ORTHO05D005035 1.4e-24 117.9 304 29.6
Psat7g123200 Pisum sativum HOM05D004246 ORTHO05D005035 1.9e-24 117.5 304 28.0
Duzib132G0317 Durio zibethinus HOM05D004246 ORTHO05D005035 2.5e-24 117.1 304 28.6
Lsat_1_v5_gn_7_87060 Lactuca sativa HOM05D004246 ORTHO05D005035 2.5e-24 117.1 302 28.1
Manes.10G065700 Manihot esculenta HOM05D004246 ORTHO05D005035 2.5e-24 117.1 304 28.9
vmacro02200 Vaccinium macrocarpon HOM05D004246 ORTHO05D005035 3.2e-24 116.7 302 29.8
EL10Ac9g21834 Beta vulgaris HOM05D004246 ORTHO05D005035 4.2e-24 116.3 304 29.3
Eucgr.G01454 Eucalyptus grandis HOM05D004246 ORTHO05D005035 5.5e-24 115.9 302 30.5
TWI75G0471 Tripterygium wilfordii HOM05D004246 ORTHO05D005035 5.5e-24 115.9 304 29.3
Atru.chr5.2732 Acer truncatum HOM05D004246 ORTHO05D005035 7.2e-24 115.5 304 28.9
Medtr4g086400 Medicago truncatula HOM05D004246 ORTHO05D005035 7.2e-24 115.5 304 28.0
Prupe.8G123100 Prunus persica HOM05D004246 ORTHO05D005035 7.2e-24 115.5 304 28.3
CSS0040207 Camellia sinensis var. sinensis HOM05D004246 ORTHO05D005035 9.4e-24 115.2 304 28.6
ECA236G4123 Erigeron canadensis HOM05D004246 ORTHO05D005035 9.4e-24 115.2 302 28.5
Sc16g0000010 Simmondsia chinensis HOM05D004246 ORTHO05D005035 9.4e-24 115.2 304 29.6
arahy.Tifrunner.gnm1.ann1.ZPUC8C Arachis hypogaea HOM05D004246 ORTHO05D005035 1.2e-23 114.8 308 30.2
MELO3C019503.2 Cucumis melo HOM05D004246 ORTHO05D005035 1.2e-23 114.8 304 28.0
Lalb_Chr09g0328261 Lupinus albus HOM05D004246 ORTHO05D005035 1.6e-23 114.4 304 28.0
MD05G1079300 Malus domestica HOM05D004246 ORTHO05D005035 1.6e-23 114.4 304 28.6
Oeu009748.1 Olea europaea HOM05D004246 ORTHO05D005035 1.6e-23 114.4 304 29.3
FAN27G3515 Fragaria x ananassa HOM05D004246 ORTHO05D005035 2.1e-23 114.0 304 27.6
HPP92_016382 Vanilla planifolia HOM05D004246 ORTHO05D005035 2.1e-23 114.0 304 28.6
arahy.Tifrunner.gnm1.ann1.2L0JPK Arachis hypogaea HOM05D004246 ORTHO05D005035 2.7e-23 113.6 308 30.2
DCAR_022031 Daucus carota HOM05D004246 ORTHO05D005035 2.7e-23 113.6 304 28.9
CsaV3_3G018640 Cucumis sativus L. HOM05D004246 ORTHO05D005035 3.6e-23 113.2 304 28.0
PGR042G3066 Punica granatum HOM05D004246 ORTHO05D005035 3.6e-23 113.2 304 28.6
GSVIVG01031760001 Vitis vinifera HOM05D004246 ORTHO05D005035 3.6e-23 113.2 304 29.9
AUR62011443 Chenopodium quinoa HOM05D004246 ORTHO05D005035 4.7e-23 112.8 304 29.9
Dinv42148 Davidia involucrata HOM05D004246 ORTHO05D005035 4.7e-23 112.8 304 29.3
Lalb_Chr16g0384651 Lupinus albus HOM05D004246 ORTHO05D005035 4.7e-23 112.8 304 28.9
TPR.G30837 Trifolium pratense HOM05D004246 ORTHO05D005035 4.7e-23 112.8 304 28.0
CDE02G3495 Ceratophyllum demersum HOM05D004246 ORTHO05D005035 6.1e-23 112.5 304 29.3
ClCG05G009940 Citrullus lanatus HOM05D004246 ORTHO05D005035 8.0e-23 112.1 304 29.3
SMO144G0143 Selaginella moellendorffii HOM05D035318 ORTHO05D005035 8.0e-23 112.1 295 29.8
Pp3c4_26990 Physcomitrium patens HOM05D004246 ORTHO05D005035 1.0e-22 111.7 294 29.6
TAR381G1706 Trochodendron aralioides HOM05D004246 ORTHO05D005035 2.3e-22 110.5 304 28.0
FvH4_2g06260 Fragaria vesca HOM05D004246 ORTHO05D005035 3.0e-22 110.2 304 27.3
FAN15G3177 Fragaria x ananassa HOM05D004246 ORTHO05D005035 3.0e-22 110.2 304 27.3
Peaxi162Scf00016g01946 Petunia axillaris HOM05D004246 ORTHO05D005035 3.0e-22 110.2 312 28.5
Aqoxy6G01354 Aquilegia oxysepala HOM05D004246 ORTHO05D005035 6.7e-22 109.0 304 28.0
Nn5g30240 Nelumbo nucifera HOM05D004246 ORTHO05D005035 1.1e-21 108.2 304 27.6
FAN24G1209 Fragaria x ananassa HOM05D004246 ORTHO05D005035 1.5e-21 107.8 304 27.3
MCO09G842 Micromonas commoda HOM05D004246 ORTHO05D005035 1.5e-21 107.8 266 32.3
Cfa005474 Carpinus fangiana HOM05D004246 ORTHO05D005035 2.0e-21 107.5 304 27.3
Prupe.8G123200 Prunus persica HOM05D004246 ORTHO05D005035 2.0e-21 107.5 305 28.2
QL11p036095 Quercus lobata HOM05D004246 ORTHO05D005035 2.0e-21 107.5 304 27.6
CiPaw.06G143200 Carya illinoinensis HOM05D004246 ORTHO05D005035 2.6e-21 107.1 304 27.6
Oeu006959.1 Olea europaea HOM05D004246 ORTHO05D005035 2.6e-21 107.1 330 27.6
Potri.009G103000 Populus trichocarpa HOM05D004246 ORTHO05D005035 2.6e-21 107.1 304 26.6
Sed0004962 Sechium edule HOM05D004246 ORTHO05D005035 3.3e-21 106.7 304 28.3
unitig_0.g860 Utricularia gibba HOM05D004246 ORTHO05D005035 3.7e-20 103.2 262 32.1
Sabra09G0078900 Salix brachista HOM05D004246 ORTHO05D005035 8.2e-20 102.1 309 26.5
Lsat_1_v5_gn_7_87621 Lactuca sativa HOM05D004246 ORTHO05D005035 4.5e-18 96.3 305 27.2
Gohir.A01G006600 Gossypium hirsutum HOM05D004246 ORTHO05D005035 7.7e-18 95.5 231 30.7
Nitab4.5_0003503g0070 Nicotiana tabacum HOM05D004246 ORTHO05D005035 7.7e-18 95.5 233 28.8
Cpa.g.sc62.22 Carica papaya HOM05D004246 ORTHO05D005035 1.1e-16 91.7 233 28.3
Ciclev10029238m.g Citrus clementina HOM05D004246 ORTHO05D005035 3.2e-16 90.1 261 28.4
Lsat_1_v5_gn_7_87300 Lactuca sativa HOM05D004246 ORTHO05D005035 1.6e-15 87.8 322 25.5
Rhsim11G0166500 Rhododendron simsii HOM05D004246 ORTHO05D005035 2.1e-15 87.4 304 26.0
BcaC07g37037 Brassica carinata HOM05D004246 ORTHO05D005035 6.7e-14 82.4 109 39.4
Sc22g0000070 Simmondsia chinensis HOM05D004246 ORTHO05D005035 8.8e-14 82.0 245 29.0
BcaNung06728 Brassica carinata HOM05D004246 ORTHO05D005035 1.2e-13 81.6 259 27.8
SEGI_18143 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 2.0e-13 80.9 159 33.3
Nitab4.5_0003080g0140 Nicotiana tabacum HOM05D004246 ORTHO05D005035 2.2e-12 77.4 262 26.3
Pp3c10_6440 Physcomitrium patens HOM05D004246 ORTHO05D005035 8.2e-12 75.5 159 34.6
Haze_01836 Corylus avellana HOM05D004246 ORTHO05D005035 3.1e-11 73.6 245 25.7
Sc23g0007050 Simmondsia chinensis HOM05D004246 ORTHO05D005035 5.3e-11 72.8 109 37.6
Os07g0664000 Oryza sativa ssp. japonica HOM05D000182 ORTHO05D000112 1.6e-10 71.2 264 26.5
CDE09G0020 Ceratophyllum demersum HOM05D004246 ORTHO05D005035 1.0e-09 68.6 229 26.6
PRCOL_00005752 Prasinoderma coloniale HOM05D004246 ORTHO05D005035 1.0e-09 68.6 269 28.6
Manes.07G082184 Manihot esculenta HOM05D004246 ORTHO05D005035 8.5e-09 65.5 109 33.0
Cfa023178 Carpinus fangiana HOM05D000182 ORTHO05D122846 1.1e-08 65.1 241 27.4
Pp3s32_590 Physcomitrium patens HOM05D000182 ORTHO05D020349 7.2e-08 62.4 256 25.8
MELO3C009506.2 Cucumis melo HOM05D000182 ORTHO05D000112 8.0e-07 58.9 216 27.3
Os12g0260500 Oryza sativa ssp. japonica HOM05D000182 ORTHO05D000112 1.0e-06 58.5 247 25.5
Os07g0663800 Oryza sativa ssp. japonica HOM05D000182 ORTHO05D000112 2.3e-06 57.4 231 26.8
Eucgr.F01817 Eucalyptus grandis HOM05D000182 ORTHO05D000112 4.0e-06 56.6 235 27.2
SEGI_18712 Sequoiadendron giganteum HOM05D000182 ORTHO05D000112 4.0e-06 56.6 201 23.9
CsaV3_3G037630 Cucumis sativus L. HOM05D000182 ORTHO05D000112 5.2e-06 56.2 216 25.9
ClCG10G018610 Citrullus lanatus HOM05D000182 ORTHO05D000112 8.8e-06 55.5 216 26.9


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