Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.6e-155 552.7 287 100.0
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 6.7e-61 238.4 343 41.7
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.7e-59 232.6 309 42.1
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.7e-54 216.5 289 42.2
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.7e-51 207.2 331 37.2
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.2e-49 201.1 263 44.9
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.6e-49 199.9 311 39.9
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.6e-49 199.9 260 45.0
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.0e-48 198.0 273 44.0
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.0e-48 198.0 311 39.5
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 3.8e-48 196.1 313 40.6
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 3.8e-48 196.1 313 40.6
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 1.1e-47 194.5 298 40.6
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.9e-47 193.7 313 39.9
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-46 191.0 327 36.4
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.6e-46 190.7 318 38.4
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.6e-46 190.7 314 39.5
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.6e-46 189.5 306 39.5
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.7e-46 189.1 318 38.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 8.0e-46 188.3 319 37.6
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.0e-45 186.4 327 36.4
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.0e-45 186.4 340 35.9
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 6.7e-45 185.3 316 37.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 6.7e-45 185.3 318 38.1
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 8.8e-45 184.9 317 38.5
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.5e-44 184.1 317 36.9
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 2.6e-44 183.3 327 36.7
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 3.3e-44 183.0 318 37.7
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.3e-44 183.0 322 38.5
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 3.3e-44 183.0 322 37.6
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 3.3e-44 183.0 328 37.2
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 5.7e-44 182.2 328 36.3
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 5.7e-44 182.2 315 36.2
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 7.4e-44 181.8 321 37.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 7.4e-44 181.8 327 36.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 9.7e-44 181.4 329 35.6
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.7e-43 180.6 326 37.1
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.7e-43 180.6 340 35.9
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.2e-43 180.3 324 37.0
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.2e-43 180.3 317 38.8
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 2.2e-43 180.3 323 36.5
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 2.2e-43 180.3 335 34.6
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 2.2e-43 180.3 329 35.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.2e-43 180.3 317 37.9
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.8e-43 179.9 329 37.1
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.7e-43 179.5 330 37.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.7e-43 179.5 333 35.7
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 4.8e-43 179.1 321 37.4
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.8e-43 179.1 332 36.7
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.8e-43 179.1 324 36.1
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 4.8e-43 179.1 313 36.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 6.3e-43 178.7 330 36.4
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-42 177.6 332 34.3
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-42 177.6 332 34.3
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.4e-42 177.6 313 36.4
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.4e-42 177.6 334 34.7
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.8e-42 177.2 306 38.9
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.4e-42 176.8 323 36.5
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.4e-42 176.8 354 34.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 3.1e-42 176.4 339 35.1
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 3.1e-42 176.4 330 35.2
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.1e-42 176.4 317 36.6
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.1e-42 176.0 335 36.1
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 4.1e-42 176.0 337 36.2
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 4.1e-42 176.0 336 36.0
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.3e-42 175.6 332 34.0
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 5.3e-42 175.6 342 35.7
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 7.0e-42 175.3 319 37.6
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.2e-41 174.5 329 36.2
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.2e-41 174.5 329 35.9
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.6e-41 174.1 338 35.2
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.0e-41 173.7 332 36.4
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.0e-41 173.7 332 36.4
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.6e-41 173.3 335 34.9
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.7e-41 171.8 333 33.3
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 7.7e-41 171.8 356 34.0
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.7e-40 170.6 321 35.5
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.7e-40 170.6 332 35.8
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 2.2e-40 170.2 299 36.1
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.9e-40 169.9 310 37.1
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.9e-40 169.9 322 36.3
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 3.8e-40 169.5 334 34.1
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.0e-40 169.1 334 34.1
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 6.5e-40 168.7 104 69.2
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 1.5e-39 167.5 332 35.8
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.5e-39 167.5 386 32.9
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.9e-39 167.2 297 36.7
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 7.2e-39 165.2 296 36.8
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 7.2e-39 165.2 340 34.4
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 9.4e-39 164.9 336 33.6
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-38 164.5 350 31.7
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.2e-38 164.5 335 34.0
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.1e-38 163.7 335 34.0
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 3.6e-38 162.9 336 34.5
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 4.7e-38 162.5 342 33.9
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.7e-38 162.5 330 33.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 4.7e-38 162.5 338 33.7
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 4.7e-38 162.5 336 34.2
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 4.7e-38 162.5 340 34.1
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 4.7e-38 162.5 340 34.1
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 4.7e-38 162.5 338 33.4
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 8.0e-38 161.8 337 33.5
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 8.0e-38 161.8 337 33.5
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 8.0e-38 161.8 337 33.5
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.0e-37 161.4 341 33.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.0e-37 161.4 341 33.1
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.4e-37 161.0 340 33.8
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.4e-37 161.0 340 33.8
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-37 161.0 334 32.9
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.3e-37 160.2 318 34.3
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.0e-37 159.8 336 31.0
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.0e-37 159.8 336 31.0
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 4.0e-37 159.5 334 33.8
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 4.0e-37 159.5 347 32.6
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 4.0e-37 159.5 129 58.9
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 8.8e-37 158.3 358 31.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 2.0e-36 157.1 105 65.7
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 2.0e-36 157.1 129 58.1
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 2.6e-36 156.8 309 35.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 9.7e-36 154.8 104 67.3
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.2e-35 153.7 394 30.7
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.2e-35 153.7 338 32.8
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.8e-35 153.3 103 66.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.8e-35 153.3 326 35.0
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.8e-35 152.5 104 65.4
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.3e-35 152.1 104 63.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 7.0e-34 148.7 260 38.8
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 7.0e-34 148.7 103 64.1
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.9e-32 143.3 107 59.8
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 8.5e-32 141.7 330 32.4
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 4.5e-25 119.4 81 64.2
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.9e-23 114.0 275 32.7
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.7e-19 99.8 87 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.1e-18 98.2 89 57.3
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 4.1e-18 96.3 283 30.7
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.8e-14 83.6 64 50.0
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.0e-12 77.4 87 48.3
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 4.4e-12 76.3 77 50.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 3.7e-11 73.2 77 45.5
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.7e-11 73.2 97 42.3
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-10 71.2 94 38.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-10 71.2 132 36.4
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.9e-07 60.8 62 51.6


User provided reference genes

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