Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g59393 Chara braunii HOM05D006380 ORTHO05D026655 0.0e+00 2190.6 1240 100.0
Pp3c20_16450 Physcomitrium patens HOM05D005887 ORTHO05D026655 1.2e-21 110.2 339 32.4
AagrBONN_evm.TU.Sc2ySwM_228.3312 Anthoceros agrestis HOM05D006380 ORTHO05D026655 8.5e-20 104.0 258 34.5
SEGI_26002 Sequoiadendron giganteum HOM05D006380 ORTHO05D026655 5.4e-14 84.7 251 30.3
Pp3c21_2290 Physcomitrium patens HOM05D005887 ORTHO05D007694 2.7e-10 72.4 242 28.5
Haze_20429 Corylus avellana HOM05D005887 ORTHO05D007694 5.2e-09 68.2 217 29.0
Peaxi162Scf00575g00211 Petunia axillaris HOM05D005887 ORTHO05D007694 8.8e-09 67.4 216 27.3
Cfa017707 Carpinus fangiana HOM05D005887 ORTHO05D007694 1.5e-08 66.6 217 28.1
Psat3g087360 Pisum sativum HOM05D005887 ORTHO05D007694 2.0e-08 66.2 217 30.0
Nitab4.5_0000613g0020 Nicotiana tabacum HOM05D005887 ORTHO05D007694 4.4e-08 65.1 216 27.8
HPP92_012147 Vanilla planifolia HOM05D005887 ORTHO05D007694 4.4e-08 65.1 215 28.4
CANSAT78G0414 Cannabis sativa HOM05D005887 ORTHO05D007694 1.7e-07 63.2 217 28.6
Nitab4.5_0000387g0010 Nicotiana tabacum HOM05D005887 ORTHO05D007694 1.7e-07 63.2 216 26.9
PGSC0003DMG400028216 Solanum tuberosum HOM05D005887 ORTHO05D007694 2.2e-07 62.8 217 28.6
A05p16500 Brassica napus HOM05D005887 ORTHO05D007694 4.9e-07 61.6 213 25.8
BraA05t20555Z Brassica rapa HOM05D005887 ORTHO05D007694 4.9e-07 61.6 213 25.8
CAN.G128.144 Capsicum annuum HOM05D005887 ORTHO05D007694 4.9e-07 61.6 214 27.1
Pp3c18_19520 Physcomitrium patens HOM05D005887 ORTHO05D007694 4.9e-07 61.6 241 26.1
Sopen10g031970 Solanum pennellii HOM05D005887 ORTHO05D007694 4.9e-07 61.6 216 28.2
Atru.chr2.1494 Acer truncatum HOM05D005887 ORTHO05D007694 6.3e-07 61.2 219 27.9
CsaV3_4G012000 Cucumis sativus L. HOM05D005887 ORTHO05D007694 6.3e-07 61.2 215 27.4
Solyc10g081470.2 Solanum lycopersicum HOM05D005887 ORTHO05D007694 6.3e-07 61.2 216 28.2
Thecc.05G243300 Theobroma cacao HOM05D005887 ORTHO05D007694 6.3e-07 61.2 217 27.6
BcaB02g08052 Brassica carinata HOM05D005887 ORTHO05D007694 8.3e-07 60.8 213 26.8
BcaC08g44312 Brassica carinata HOM05D005887 ORTHO05D007694 8.3e-07 60.8 216 26.9
C06p17350 Brassica napus HOM05D005887 ORTHO05D007694 8.3e-07 60.8 216 26.9
BolC6t36931H Brassica oleracea HOM05D005887 ORTHO05D007694 8.3e-07 60.8 216 26.9
AT5G35220 Arabidopsis thaliana HOM05D005887 ORTHO05D007694 1.1e-06 60.5 213 26.3
ClCG04G004540 Citrullus lanatus HOM05D005887 ORTHO05D007694 1.1e-06 60.5 215 27.4
PSO782G2024 Papaver somniferum HOM05D006380 ORTHO05D008400 1.1e-06 60.5 231 26.0
PSO782G3183 Papaver somniferum HOM05D006380 ORTHO05D008400 1.1e-06 60.5 231 26.0
PSO782G4930 Papaver somniferum HOM05D006380 ORTHO05D008400 1.1e-06 60.5 231 26.0
EL10Ac9g22178 Beta vulgaris HOM05D006380 ORTHO05D008400 1.4e-06 60.1 292 25.0
MELO3C008847.2 Cucumis melo HOM05D005887 ORTHO05D007694 1.4e-06 60.1 215 27.4
Gohir.A11G230900 Gossypium hirsutum HOM05D005887 ORTHO05D007694 1.4e-06 60.1 217 28.1
Gohir.D11G242200 Gossypium hirsutum HOM05D005887 ORTHO05D007694 1.4e-06 60.1 217 28.1
Gorai.007G256500 Gossypium raimondii HOM05D005887 ORTHO05D007694 1.4e-06 60.1 217 28.1
Potri.013G064700 Populus trichocarpa HOM05D005887 ORTHO05D007694 1.4e-06 60.1 216 26.9
Sabra13G0056600 Salix brachista HOM05D005887 ORTHO05D007694 1.4e-06 60.1 216 25.9
TPR.G17873 Trifolium pratense HOM05D005887 ORTHO05D007694 1.4e-06 60.1 217 29.0
Thhalv10003446m.g Eutrema salsugineum HOM05D005887 ORTHO05D007694 1.8e-06 59.7 213 25.8
PSO782G2056 Papaver somniferum HOM05D006380 ORTHO05D008400 1.8e-06 59.7 231 26.0
PSO782G3094 Papaver somniferum HOM05D006380 ORTHO05D008400 1.8e-06 59.7 231 26.0
Glyma.19G116000 Glycine max HOM05D005887 ORTHO05D007694 2.4e-06 59.3 221 28.5
PGR142G3047 Punica granatum HOM05D005887 ORTHO05D007694 2.4e-06 59.3 219 26.9
Aa31LG9G14060 Aethionema arabicum HOM05D005887 ORTHO05D007694 3.1e-06 58.9 213 24.4
Ciclev10019476m.g Citrus clementina HOM05D005887 ORTHO05D007694 3.1e-06 58.9 219 27.4
Sp7g07090 Schrenkiella parvula HOM05D005887 ORTHO05D007694 3.1e-06 58.9 213 25.4
TWI32G0189 Tripterygium wilfordii HOM05D005887 ORTHO05D007694 3.1e-06 58.9 217 26.7
EL10Ac5g11724 Beta vulgaris HOM05D005887 ORTHO05D007694 4.1e-06 58.5 219 27.9
Manes.09G137200 Manihot esculenta HOM05D005887 ORTHO05D007694 4.1e-06 58.5 221 26.2
Medtr7g086430 Medicago truncatula HOM05D005887 ORTHO05D007694 4.1e-06 58.5 217 29.0
Sed0023418 Sechium edule HOM05D005887 ORTHO05D007694 4.1e-06 58.5 215 27.4
Hund00420 Selenicereus undatus HOM05D006380 ORTHO05D008400 4.1e-06 58.5 256 26.6
Sc07g0007810 Simmondsia chinensis HOM05D005887 ORTHO05D007694 4.1e-06 58.5 217 26.7
VMungo1383G0364 Vigna mungo HOM05D005887 ORTHO05D007694 4.1e-06 58.5 221 27.1
AL7G44120 Arabidopsis lyrata HOM05D005887 ORTHO05D007694 5.4e-06 58.2 216 26.4
CARHR217310 Cardamine hirsuta HOM05D005887 ORTHO05D007694 5.4e-06 58.2 216 26.4
Dinv25053 Davidia involucrata HOM05D005887 ORTHO05D007694 5.4e-06 58.2 219 26.9
ECA233G0274 Erigeron canadensis HOM05D005887 ORTHO05D007694 5.4e-06 58.2 220 26.8
Glyma.16G037100 Glycine max HOM05D005887 ORTHO05D007694 5.4e-06 58.2 221 27.1
Phvul.001G115400 Phaseolus vulgaris HOM05D005887 ORTHO05D007694 5.4e-06 58.2 221 26.7
HPP92_020044 Vanilla planifolia HOM05D006380 ORTHO05D008400 5.4e-06 58.2 229 25.3
ATR0697G253 Amborella trichopoda HOM05D005887 ORTHO05D007694 7.0e-06 57.8 214 26.2
A06p13930 Brassica napus HOM05D006380 ORTHO05D008400 7.0e-06 57.8 298 23.8
BraA06t24534Z Brassica rapa HOM05D006380 ORTHO05D008400 7.0e-06 57.8 298 23.8
arahy.Tifrunner.gnm1.ann1.XY5X2R Arachis hypogaea HOM05D006380 ORTHO05D008400 9.2e-06 57.4 254 24.4
CiPaw.09G168200 Carya illinoinensis HOM05D005887 ORTHO05D007694 9.2e-06 57.4 219 26.5
Gorai.002G011000 Gossypium raimondii HOM05D006380 ORTHO05D008400 9.2e-06 57.4 247 24.3
Manes.10G087000 Manihot esculenta HOM05D006380 ORTHO05D008400 9.2e-06 57.4 296 22.3
TWI59G1228 Tripterygium wilfordii HOM05D006380 ORTHO05D008400 9.2e-06 57.4 309 24.6


User provided reference genes

Program Settings