Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 4.8e-182 641.0 307 100.0
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.3e-115 420.2 282 68.4
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.6e-113 413.3 282 68.4
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.1e-113 412.9 287 66.9
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 8.9e-112 407.5 281 66.9
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.6e-111 406.0 281 67.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 3.4e-111 405.6 281 67.6
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 3.4e-111 405.6 281 66.5
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.7e-110 402.1 283 65.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.9e-110 401.7 281 65.8
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.4e-110 401.4 281 65.8
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 6.4e-110 401.4 281 66.2
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 8.4e-110 401.0 281 66.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 8.4e-110 401.0 281 66.2
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.1e-109 400.6 281 66.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.1e-109 400.6 281 65.5
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.1e-109 400.6 281 65.8
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.4e-109 400.2 281 65.1
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.4e-109 400.2 283 64.7
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.4e-109 400.2 282 64.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.9e-109 399.8 281 65.5
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.9e-109 399.8 283 64.7
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.9e-109 399.8 283 64.7
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 1.9e-109 399.8 283 65.0
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.4e-109 399.4 290 65.2
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.4e-109 399.4 290 65.2
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 4.1e-109 398.7 281 64.4
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 5.4e-109 398.3 289 64.4
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 5.4e-109 398.3 281 65.1
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.4e-109 398.3 281 65.5
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 7.1e-109 397.9 281 64.1
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 7.1e-109 397.9 281 64.4
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 64.1
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 65.1
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 65.5
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 64.8
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 64.8
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 9.2e-109 397.5 281 64.8
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.2e-108 397.1 281 66.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.2e-108 397.1 281 64.4
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.6e-108 396.7 281 64.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.6e-108 396.7 281 64.8
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 2.1e-108 396.4 282 64.5
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.7e-108 396.0 281 64.1
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.7e-108 396.0 281 64.1
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 2.7e-108 396.0 281 64.8
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 3.5e-108 395.6 281 64.8
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.6e-108 395.2 281 65.5
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.6e-108 395.2 281 65.5
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 6.0e-108 394.8 281 64.4
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 7.8e-108 394.4 281 65.5
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.0e-107 394.0 281 64.1
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 1.0e-107 394.0 281 64.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.0e-107 394.0 282 63.8
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.3e-107 393.7 281 64.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.7e-107 393.3 281 64.4
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-107 393.3 282 64.2
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.7e-107 393.3 283 65.0
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 1.7e-107 393.3 282 64.2
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 2.3e-107 392.9 281 63.3
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.3e-107 392.9 281 64.4
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.3e-107 392.9 281 64.1
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.3e-107 392.9 282 63.8
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.0e-107 392.5 283 65.7
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 3.9e-107 392.1 281 63.7
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 3.9e-107 392.1 281 63.0
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 5.1e-107 391.7 281 64.1
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 5.1e-107 391.7 281 64.1
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 6.6e-107 391.3 281 64.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 6.6e-107 391.3 281 66.2
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 8.6e-107 391.0 282 63.1
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 8.6e-107 391.0 281 64.8
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.1e-106 390.6 281 64.8
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-106 390.6 281 65.1
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.5e-106 390.2 271 66.8
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.9e-106 389.8 283 64.3
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.5e-106 389.4 282 63.5
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.5e-106 389.4 281 64.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.5e-106 389.4 281 64.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.3e-106 389.0 281 64.1
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 4.3e-106 388.7 281 63.3
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.3e-106 388.7 283 64.3
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 4.3e-106 388.7 281 64.4
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 5.6e-106 388.3 281 63.7
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 5.6e-106 388.3 281 63.7
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 7.3e-106 387.9 276 63.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 7.3e-106 387.9 281 63.0
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 9.6e-106 387.5 287 61.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 9.6e-106 387.5 281 64.1
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.6e-106 387.5 283 63.6
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.2e-105 387.1 281 64.1
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.2e-105 387.1 281 63.3
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.2e-105 387.1 281 63.0
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.1e-105 386.3 281 61.9
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.8e-105 386.0 281 62.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.8e-105 386.0 281 62.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-104 384.0 281 62.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.1e-104 384.0 281 62.3
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.1e-104 384.0 312 58.7
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 6.8e-104 381.3 281 63.0
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 8.9e-104 380.9 282 62.8
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.1e-101 374.0 281 62.6
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.4e-101 372.9 267 65.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.2e-101 372.5 271 63.1
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 4.6e-100 368.6 267 64.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.3e-99 367.1 283 60.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.3e-99 367.1 265 63.8
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 3.3e-98 362.5 282 60.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.6e-97 360.1 304 57.6
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.8e-97 359.4 267 62.5
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.8e-97 358.6 271 62.0
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.4e-96 356.3 247 66.4
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 6.9e-96 354.8 305 57.7
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 6.4e-94 348.2 265 63.0
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.1e-93 347.4 286 59.1
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.9e-93 346.7 283 58.3
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.3e-89 334.0 281 55.9
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 7.9e-84 314.7 282 52.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 7.9e-84 314.7 217 66.8
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.3e-83 313.9 295 53.9
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.9e-78 295.4 291 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 6.0e-76 288.5 189 69.8
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-66 257.7 179 66.5
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.9e-66 256.9 302 45.7
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.8e-65 253.1 293 43.7
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 3.4e-63 246.1 182 62.6
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.0e-62 244.6 179 62.6
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.1e-61 241.1 166 66.3
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.1e-58 231.1 311 42.4
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 2.8e-41 173.3 164 54.9
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.7e-36 156.8 217 39.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.0e-35 152.9 214 39.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 9.8e-34 148.3 102 64.7
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.2e-29 132.1 118 50.8
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.7e-28 129.4 94 58.5
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-25 120.6 88 58.0
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.7e-20 102.8 70 62.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.9e-14 83.2 216 29.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.8e-11 72.4 88 40.9


User provided reference genes

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