Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 3.8e-268 927.5 456 100.0
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 3.7e-45 186.8 124 72.6
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 5.3e-44 183.0 123 70.7
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 5.0e-42 176.4 125 63.2
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.1e-41 175.3 138 58.0
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.4e-41 174.9 138 58.0
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 1.9e-41 174.5 125 62.4
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.2e-41 173.7 125 61.6
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 4.2e-41 173.3 125 61.6
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 5.5e-41 172.9 124 63.7
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 9.4e-41 172.2 125 60.8
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 9.4e-41 172.2 116 69.8
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 9.4e-41 172.2 124 63.7
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 2.1e-40 171.0 122 65.6
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 2.1e-40 171.0 124 61.3
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 2.7e-40 170.6 122 64.8
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 2.7e-40 170.6 124 63.7
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 4.7e-40 169.9 124 62.9
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 6.1e-40 169.5 122 64.8
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 6.1e-40 169.5 124 62.9
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 7.9e-40 169.1 138 58.0
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 7.9e-40 169.1 124 60.5
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.0e-39 168.7 124 62.1
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.0e-39 168.7 122 64.8
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.4e-39 168.3 124 62.9
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.4e-39 168.3 124 62.9
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 2.3e-39 167.5 124 60.5
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 2.3e-39 167.5 122 63.1
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 3.0e-39 167.2 124 59.7
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 3.0e-39 167.2 123 63.4
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.0e-39 167.2 124 62.1
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 3.0e-39 167.2 124 60.5
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 3.9e-39 166.8 122 63.9
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 3.9e-39 166.8 121 62.8
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 3.9e-39 166.8 121 62.8
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 5.1e-39 166.4 122 62.3
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 6.7e-39 166.0 120 64.2
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 6.7e-39 166.0 122 62.3
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 6.7e-39 166.0 129 61.2
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 6.7e-39 166.0 121 62.8
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 6.7e-39 166.0 122 62.3
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 6.7e-39 166.0 123 60.2
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 6.7e-39 166.0 123 61.0
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 8.8e-39 165.6 122 61.5
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 8.8e-39 165.6 122 61.5
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 8.8e-39 165.6 120 64.2
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 8.8e-39 165.6 121 62.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.5e-38 164.9 121 60.3
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 1.5e-38 164.9 122 61.5
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.5e-38 164.9 122 61.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.5e-38 164.9 122 62.3
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.6e-38 164.1 163 51.5
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 3.3e-38 163.7 122 63.1
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 3.3e-38 163.7 117 64.1
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 3.3e-38 163.7 122 63.1
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 3.3e-38 163.7 139 54.0
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 4.4e-38 163.3 121 60.3
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 5.7e-38 162.9 124 60.5
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 7.4e-38 162.5 128 59.4
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 9.7e-38 162.2 135 55.6
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 9.7e-38 162.2 116 64.7
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 1.3e-37 161.8 120 63.3
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.3e-37 161.8 138 58.0
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 1.3e-37 161.8 121 59.5
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 1.7e-37 161.4 122 59.8
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 2.8e-37 160.6 120 62.5
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 2.8e-37 160.6 121 59.5
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 2.8e-37 160.6 116 63.8
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 3.7e-37 160.2 115 66.1
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 3.7e-37 160.2 135 55.6
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 4.8e-37 159.8 122 63.1
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 8.2e-37 159.1 113 65.5
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.4e-36 158.3 121 59.5
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.4e-36 158.3 113 63.7
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.8e-36 157.9 121 58.7
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 3.1e-36 157.1 115 62.6
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 4.1e-36 156.8 113 63.7
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 7.0e-36 156.0 113 63.7
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 7.0e-36 156.0 113 64.6
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 7.0e-36 156.0 158 50.0
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 1.5e-35 154.8 115 64.3
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 2.0e-35 154.5 113 64.6
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 2.6e-35 154.1 124 59.7
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 2.6e-35 154.1 115 59.1
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 3.5e-35 153.7 113 62.8
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 5.9e-35 152.9 114 63.2
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 7.7e-35 152.5 113 59.3
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 7.7e-35 152.5 115 63.5
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 7.7e-35 152.5 113 62.8
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 7.7e-35 152.5 112 58.9
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 2.2e-34 151.0 112 59.8
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 8.5e-34 149.1 109 63.3
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 8.5e-34 149.1 124 58.1
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 9.4e-33 145.6 115 54.8
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 6.1e-32 142.9 106 61.3
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.0e-31 142.1 124 54.8
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-30 138.3 138 51.4
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.3e-29 135.2 85 70.6
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.1e-28 132.1 113 58.4
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 2.6e-27 127.5 125 48.8
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 7.7e-27 125.9 84 65.5
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 2.2e-26 124.4 118 53.4
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 3.2e-25 120.6 96 58.3
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.7e-24 117.5 94 59.6
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 5.2e-23 113.2 88 58.0
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 2.8e-21 107.5 134 44.8
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 7.7e-19 99.4 124 45.2
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 6.3e-13 79.7 143 37.8
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 1.0e-10 72.4 42 71.4
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.7e-10 71.6 43 69.8
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.2e-08 65.5 52 53.8
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 3.0e-07 60.8 49 61.2
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 4.4e-06 57.0 37 67.6
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 4.4e-06 57.0 35 68.6


User provided reference genes

Program Settings