Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 7.9e-115 417.2 216 100.0
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.2e-33 147.5 192 43.8
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.5e-33 147.1 191 44.0
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 2.0e-33 146.7 191 43.5
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.0e-33 146.7 191 43.5
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 4.5e-33 145.6 192 42.2
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 9.9e-33 144.4 191 43.5
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 1.1e-31 141.0 191 43.5
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.1e-31 141.0 192 43.2
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 1.4e-31 140.6 189 45.0
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.9e-31 140.2 193 42.0
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.9e-31 140.2 190 42.6
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.4e-31 139.8 191 44.0
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.4e-31 139.8 191 44.0
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.2e-31 139.4 191 43.5
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 5.4e-31 138.7 191 44.5
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 5.4e-31 138.7 192 41.7
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 5.4e-31 138.7 192 40.6
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 5.4e-31 138.7 193 39.9
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 9.3e-31 137.9 190 42.6
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 9.3e-31 137.9 192 41.1
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.2e-30 137.5 192 42.2
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-30 137.1 191 40.8
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-30 137.1 191 40.3
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.6e-30 137.1 191 42.4
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.7e-30 136.3 191 41.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 3.5e-30 136.0 191 41.4
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 3.5e-30 136.0 193 40.4
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 3.5e-30 136.0 191 41.9
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 3.5e-30 136.0 190 41.6
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.6e-30 135.6 191 41.4
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 6.0e-30 135.2 191 41.4
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 6.0e-30 135.2 191 42.9
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 7.9e-30 134.8 191 41.4
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 7.9e-30 134.8 192 41.1
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 7.9e-30 134.8 193 39.9
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 1.0e-29 134.4 192 41.7
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.0e-29 134.4 191 40.3
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.3e-29 134.0 192 42.7
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.8e-29 133.7 191 40.8
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.8e-29 133.7 191 44.0
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 1.8e-29 133.7 191 41.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 1.8e-29 133.7 190 38.4
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 2.3e-29 133.3 190 40.0
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 3.0e-29 132.9 192 38.5
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 5.1e-29 132.1 191 39.8
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 5.1e-29 132.1 192 40.6
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 1.1e-28 131.0 191 38.7
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.1e-28 131.0 192 39.6
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.1e-28 131.0 193 39.9
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.5e-28 130.6 191 40.8
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-28 130.6 192 39.6
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.5e-28 130.6 192 37.5
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.9e-28 130.2 192 41.1
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-28 130.2 192 39.6
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-28 130.2 192 39.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 2.5e-28 129.8 191 40.3
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 4.3e-28 129.0 168 42.3
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 4.3e-28 129.0 171 40.9
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 4.3e-28 129.0 191 39.3
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 5.6e-28 128.6 191 41.9
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 7.4e-28 128.3 191 38.2
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 2.1e-27 126.7 192 41.7
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.1e-27 126.7 192 38.5
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.1e-27 126.7 192 38.5
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 3.6e-27 125.9 192 38.5
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 3.6e-27 125.9 192 38.5
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 4.8e-27 125.6 170 40.6
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 4.8e-27 125.6 191 41.9
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 6.2e-27 125.2 191 39.8
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 8.1e-27 124.8 191 39.3
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.1e-27 124.8 192 39.1
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 8.1e-27 124.8 191 37.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 1.1e-26 124.4 194 36.1
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.4e-26 124.0 191 36.6
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 1.8e-26 123.6 189 38.6
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 4.0e-26 122.5 193 40.4
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.3e-26 122.1 191 37.2
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 6.9e-26 121.7 191 35.1
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.2e-25 120.9 191 39.8
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 1.5e-25 120.6 191 35.1
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 3.4e-25 119.4 191 39.3
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 3.4e-25 119.4 191 37.2
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 3.4e-25 119.4 191 39.3
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 3.4e-25 119.4 191 39.3
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 4.5e-25 119.0 191 39.3
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 4.5e-25 119.0 192 40.6
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.3e-24 117.5 186 37.6
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.7e-24 117.1 192 36.5
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 2.9e-24 116.3 192 35.4
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 2.9e-24 116.3 191 35.6
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 4.9e-24 115.5 193 37.8
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 3.2e-23 112.8 192 36.5
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 7.1e-23 111.7 193 34.7
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.2e-22 110.9 192 34.9
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 1.6e-22 110.5 192 35.9
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 4.6e-22 109.0 192 33.9
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.0e-21 107.8 123 43.9
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.8e-21 107.1 122 50.8
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.9e-21 105.9 191 32.5
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 3.9e-21 105.9 192 33.3
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 5.1e-21 105.5 125 42.4
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.9e-20 103.6 121 43.0
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.9e-20 103.6 121 42.1
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 4.3e-20 102.4 247 33.2
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 7.4e-20 101.7 196 31.6
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.7e-19 99.4 121 43.0
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 6.2e-19 98.6 122 40.2
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.5e-14 82.8 86 43.0
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.0e-13 79.7 191 32.5
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.5e-09 67.4 110 36.4
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.4e-07 60.8 74 36.5


User provided reference genes

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