Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.4e-100 369.8 209 100.0
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 4.9e-21 105.5 112 55.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.1e-20 104.4 110 52.7
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 2.5e-20 103.2 111 54.1
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 4.2e-20 102.4 107 50.5
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 5.5e-20 102.1 102 52.9
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 9.3e-20 101.3 111 50.5
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 2.1e-19 100.1 108 48.1
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 2.1e-19 100.1 102 53.9
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 3.5e-19 99.4 105 50.5
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.0e-18 97.8 117 47.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.0e-18 97.8 102 53.9
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 1.0e-18 97.8 107 48.6
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-18 97.1 115 45.2
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.8e-18 97.1 133 43.6
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.3e-18 96.7 101 48.5
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 2.3e-18 96.7 102 52.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 3.0e-18 96.3 94 53.2
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 3.0e-18 96.3 90 54.4
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 3.9e-18 95.9 108 47.2
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 5.1e-18 95.5 113 46.9
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 5.1e-18 95.5 96 53.1
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 6.7e-18 95.1 94 53.2
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 8.7e-18 94.7 94 50.0
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 8.7e-18 94.7 94 53.2
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 8.7e-18 94.7 104 50.0
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 8.7e-18 94.7 99 50.5
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 8.7e-18 94.7 115 45.2
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.5e-17 94.0 96 50.0
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.5e-17 94.0 96 50.0
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 1.5e-17 94.0 94 51.1
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 1.9e-17 93.6 99 49.5
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.9e-17 93.6 96 50.0
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.9e-17 93.6 99 49.5
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.9e-17 93.6 88 55.7
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 2.5e-17 93.2 101 48.5
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.5e-17 93.2 100 51.0
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 3.3e-17 92.8 90 53.3
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 5.7e-17 92.0 106 47.2
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 5.7e-17 92.0 100 51.0
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 7.4e-17 91.7 90 51.1
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 7.4e-17 91.7 83 55.4
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 9.6e-17 91.3 94 53.2
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.6e-17 91.3 94 53.2
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.6e-17 91.3 94 53.2
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.6e-17 91.3 94 53.2
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 9.6e-17 91.3 83 53.0
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.3e-16 90.9 105 45.7
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.3e-16 90.9 96 50.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 2.1e-16 90.1 96 50.0
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.1e-16 90.1 156 40.4
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.8e-16 89.7 113 45.1
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.8e-16 89.7 83 51.8
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.8e-16 89.7 151 39.7
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 3.7e-16 89.4 103 46.6
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 3.7e-16 89.4 96 47.9
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 4.8e-16 89.0 137 43.1
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 6.2e-16 88.6 99 46.5
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 6.2e-16 88.6 108 45.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 8.2e-16 88.2 155 41.3
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 8.2e-16 88.2 157 41.4
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.1e-15 87.8 98 48.0
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.1e-15 87.8 111 46.8
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.4e-15 87.4 83 50.6
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.4e-15 87.4 95 48.4
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.8e-15 87.0 122 46.7
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.8e-15 87.0 119 42.0
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.8e-15 87.0 103 46.6
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.8e-15 87.0 147 40.8
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 3.1e-15 86.3 96 46.9
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.1e-15 86.3 95 47.4
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 4.0e-15 85.9 106 42.5
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.2e-14 84.3 156 38.5
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.5e-14 84.0 98 45.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.5e-14 84.0 107 43.9
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.5e-14 84.0 112 43.8
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.5e-14 84.0 104 45.2
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.5e-14 84.0 104 45.2
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 2.0e-14 83.6 141 40.4
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.6e-14 83.2 218 36.7
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.6e-14 83.2 139 41.0
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.6e-14 83.2 94 48.9
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 2.6e-14 83.2 101 47.5
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 3.4e-14 82.8 101 45.5
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 7.6e-14 81.6 157 40.1
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 7.6e-14 81.6 157 40.1
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 7.6e-14 81.6 83 49.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.0e-13 81.3 160 39.4
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.0e-13 81.3 138 41.3
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 2.9e-13 79.7 159 38.4
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.8e-13 79.3 154 40.3
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.8e-13 79.3 154 40.3
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 6.5e-13 78.6 86 45.3
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.1e-12 77.8 92 48.9
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.4e-12 77.4 84 45.2
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 2.5e-12 76.6 100 45.0
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 3.2e-12 76.3 152 40.1
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 3.2e-12 76.3 152 40.1
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 7.1e-12 75.1 144 38.2
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.6e-11 73.9 81 53.1
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.6e-11 73.9 186 37.6
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 4.6e-11 72.4 150 36.0
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 7.9e-11 71.6 154 35.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.0e-10 71.2 111 45.0
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.0e-10 71.2 165 35.8
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.1e-09 67.8 83 43.4
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.3e-09 65.9 102 40.2
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 5.7e-09 65.5 205 31.2
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 7.4e-09 65.1 141 36.9
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 9.7e-09 64.7 79 48.1
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.6e-08 63.9 157 33.1
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 8.2e-08 61.6 56 55.4
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-07 61.2 92 40.2
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 4.1e-07 59.3 91 40.7
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.1e-07 59.3 91 40.7
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.1e-07 59.3 91 40.7
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 4.1e-07 59.3 207 29.5
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-06 57.8 98 39.8
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 3.4e-06 56.2 94 37.2


User provided reference genes

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