Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 2.8e-150 535.4 264 100.0
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 3.0e-19 100.1 114 44.7
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 6.6e-19 99.0 153 37.3
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 1.9e-18 97.4 115 43.5
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 3.3e-18 96.7 116 44.0
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.6e-17 94.4 115 42.6
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 4.8e-17 92.8 130 40.0
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 8.1e-17 92.0 115 42.6
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 1.1e-16 91.7 115 42.6
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 1.4e-16 91.3 143 39.2
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 1.8e-16 90.9 114 42.1
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 1.8e-16 90.9 116 41.4
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 2.4e-16 90.5 91 48.4
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 2.4e-16 90.5 115 40.9
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 3.1e-16 90.1 115 42.6
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 3.1e-16 90.1 115 41.7
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 5.3e-16 89.4 115 41.7
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 5.3e-16 89.4 117 40.2
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 6.9e-16 89.0 118 40.7
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.9e-16 89.0 141 36.9
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.9e-16 89.0 141 36.9
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 6.9e-16 89.0 115 39.1
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 9.0e-16 88.6 115 40.9
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 1.2e-15 88.2 115 40.9
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.0e-15 87.4 115 40.0
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 2.0e-15 87.4 115 41.7
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 2.6e-15 87.0 114 39.5
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 2.6e-15 87.0 115 39.1
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 2.6e-15 87.0 115 38.3
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 2.6e-15 87.0 123 39.0
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 3.4e-15 86.7 113 41.6
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 3.4e-15 86.7 114 41.2
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 4.5e-15 86.3 115 40.9
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 5.8e-15 85.9 115 38.3
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 5.8e-15 85.9 115 40.0
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 5.8e-15 85.9 115 40.0
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 7.6e-15 85.5 125 41.6
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 7.6e-15 85.5 115 38.3
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 7.6e-15 85.5 115 39.1
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 7.6e-15 85.5 115 39.1
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 9.9e-15 85.1 115 40.0
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 1.3e-14 84.7 114 41.2
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 1.3e-14 84.7 114 40.4
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 1.3e-14 84.7 114 40.4
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 1.3e-14 84.7 114 40.4
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.7e-14 84.3 115 40.9
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 1.7e-14 84.3 114 41.2
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 1.7e-14 84.3 115 39.1
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 1.7e-14 84.3 115 39.1
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 2.2e-14 84.0 115 39.1
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 2.2e-14 84.0 116 39.7
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 2.2e-14 84.0 115 40.0
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.2e-14 84.0 114 40.4
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 3.8e-14 83.2 114 41.2
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 3.8e-14 83.2 132 37.9
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 3.8e-14 83.2 132 37.9
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 3.8e-14 83.2 132 37.9
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 4.9e-14 82.8 112 39.3
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 4.9e-14 82.8 115 39.1
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 6.4e-14 82.4 115 39.1
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 8.4e-14 82.0 115 39.1
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 8.4e-14 82.0 115 39.1
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.1e-13 81.6 115 38.3
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.1e-13 81.6 114 38.6
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 1.4e-13 81.3 115 38.3
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 1.9e-13 80.9 115 39.1
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 1.9e-13 80.9 117 36.8
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 2.4e-13 80.5 115 38.3
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 3.2e-13 80.1 117 37.6
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 3.2e-13 80.1 115 37.4
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 4.2e-13 79.7 115 37.4
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 4.2e-13 79.7 115 37.4
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 5.4e-13 79.3 114 39.5
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 5.4e-13 79.3 114 38.6
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 7.1e-13 79.0 124 37.1
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 7.1e-13 79.0 118 36.4
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 9.3e-13 78.6 115 35.7
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 1.2e-12 78.2 115 37.4
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 1.2e-12 78.2 115 36.5
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 2.1e-12 77.4 115 40.0
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 2.1e-12 77.4 115 40.0
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 2.1e-12 77.4 115 40.0
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 2.1e-12 77.4 115 40.0
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 2.1e-12 77.4 115 40.0
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 2.1e-12 77.4 117 36.8
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 2.7e-12 77.0 115 36.5
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 3.5e-12 76.6 118 35.6
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 4.6e-12 76.3 122 34.4
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 7.9e-12 75.5 142 34.5
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 1.3e-11 74.7 115 36.5
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 1.3e-11 74.7 115 36.5
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 3.9e-11 73.2 95 41.1
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 8.7e-11 72.0 115 34.8
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 1.1e-10 71.6 165 30.3
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 1.1e-10 71.6 115 33.9
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 4.8e-09 66.2 123 35.0
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 9.9e-07 58.5 124 29.0
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 1.3e-06 58.2 80 38.8
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.2e-06 57.4 92 37.0
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 8.4e-06 55.5 90 37.8


User provided reference genes

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