Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 0.0e+00 1527.7 780 100.0
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 1.0e-143 515.0 660 42.9
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 6.8e-140 502.3 661 41.5
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 8.9e-132 475.3 632 41.3
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 3.4e-131 473.4 616 43.0
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 4.4e-131 473.0 632 41.0
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 4.9e-130 469.5 632 41.5
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 4.9e-130 469.5 601 42.3
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 1.4e-129 468.0 643 40.7
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.2e-128 464.9 642 40.2
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 5.9e-128 462.6 627 41.5
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 1.7e-127 461.1 630 40.2
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 1.7e-127 461.1 637 38.9
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 2.9e-127 460.3 646 40.1
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 3.9e-127 459.9 630 41.0
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 8.6e-127 458.8 634 40.1
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 2.5e-126 457.2 627 40.2
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 4.3e-126 456.4 630 39.5
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 7.3e-126 455.7 623 40.6
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 1.2e-125 454.9 629 41.3
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.6e-125 454.5 627 40.4
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 2.8e-125 453.8 633 40.6
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 2.8e-125 453.8 655 40.0
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 4.7e-125 453.0 636 40.7
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 6.1e-125 452.6 689 39.3
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 8.0e-125 452.2 637 39.7
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 8.0e-125 452.2 615 40.3
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 1.4e-124 451.4 639 39.6
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 1.8e-124 451.1 608 40.6
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 2.3e-124 450.7 625 40.3
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 4.0e-124 449.9 625 39.4
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 5.2e-124 449.5 630 39.5
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 5.2e-124 449.5 635 39.2
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 6.8e-124 449.1 655 38.9
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 6.8e-124 449.1 623 41.9
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 6.8e-124 449.1 625 40.2
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 1.5e-123 448.0 623 40.9
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 1.5e-123 448.0 621 40.6
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 1.5e-123 448.0 620 40.8
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 3.4e-123 446.8 620 40.8
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 5.8e-123 446.0 628 39.8
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 5.8e-123 446.0 625 40.0
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 9.8e-123 445.3 625 39.4
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 9.8e-123 445.3 625 40.2
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 2.9e-122 443.7 618 40.6
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 3.7e-122 443.4 624 39.4
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 6.4e-122 442.6 656 40.4
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 6.4e-122 442.6 627 38.6
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 1.4e-121 441.4 637 39.9
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 1.4e-121 441.4 646 38.4
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 1.4e-121 441.4 636 38.8
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 2.4e-121 440.7 637 39.7
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 2.4e-121 440.7 624 38.9
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 3.2e-121 440.3 626 39.6
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 9.2e-121 438.7 622 41.2
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 1.2e-120 438.3 638 39.2
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 7.8e-120 435.6 627 39.2
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 3.0e-119 433.7 589 40.7
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 5.0e-119 433.0 613 38.8
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 3.3e-118 430.3 672 37.4
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 7.3e-118 429.1 614 38.6
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.2e-117 428.3 614 38.8
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.6e-117 427.9 614 38.8
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 2.1e-117 427.6 623 40.0
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.1e-116 425.2 631 37.9
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 1.1e-116 425.2 629 39.4
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 1.1e-116 425.2 629 39.4
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 3.1e-116 423.7 626 37.2
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 4.0e-116 423.3 638 37.6
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 4.0e-116 423.3 630 39.5
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 6.8e-116 422.5 624 39.4
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 9.8e-115 418.7 625 39.2
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 9.8e-115 418.7 625 39.4
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 3.7e-114 416.8 639 38.3
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 4.9e-114 416.4 625 39.0
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 4.9e-114 416.4 626 39.3
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 6.4e-114 416.0 668 37.7
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 5.4e-113 412.9 628 39.0
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 5.4e-113 412.9 657 37.4
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 5.4e-113 412.9 655 37.9
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 7.0e-113 412.5 614 38.4
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 3.6e-109 400.2 611 38.8
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 2.3e-108 397.5 623 37.9
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 1.5e-107 394.8 625 37.8
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 5.8e-107 392.9 668 37.1
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 2.9e-106 390.6 553 39.2
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 4.9e-106 389.8 626 35.8
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 8.3e-106 389.0 628 36.8
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 5.4e-105 386.3 625 37.6
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 7.1e-105 386.0 625 37.4
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 3.0e-103 380.6 625 37.1
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 5.1e-103 379.8 554 37.5
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 5.2e-100 369.8 560 36.6
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 2.9e-98 364.0 577 37.4
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 7.1e-97 359.4 646 35.9
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 1.3e-95 355.1 611 37.3
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 2.8e-93 347.4 505 39.0
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 1.9e-81 308.1 632 33.2
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 1.6e-80 305.1 661 32.8
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 6.7e-79 299.7 650 31.7
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 6.7e-79 299.7 482 36.9
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 2.0e-75 288.1 454 37.7
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 1.2e-72 278.9 632 31.2
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.3e-66 258.8 314 43.6
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 2.2e-66 258.1 560 30.0
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 6.3e-37 160.2 215 39.1
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 1.5e-33 149.1 360 30.3
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 1.8e-23 115.5 145 42.1
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 1.4e-20 105.9 205 32.2
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 1.2e-19 102.8 106 47.2
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 1.2e-19 102.8 109 47.7
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 1.7e-18 99.0 93 50.5
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 6.6e-18 97.1 106 45.3
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 1.2e-14 86.3 86 47.7
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 9.8e-14 83.2 277 26.4
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 2.2e-13 82.0 154 32.5
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.4e-12 79.3 130 31.5
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 1.8e-12 79.0 142 31.0
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.6e-11 75.9 154 30.5
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 2.7e-11 75.1 89 41.6
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 1.1e-09 69.7 512 19.9
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 3.3e-09 68.2 141 31.9
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.6e-08 65.9 83 37.3
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 8.0e-08 63.5 237 23.6
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 1.0e-07 63.2 60 43.3
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 5.8e-06 57.4 75 37.3
HanXRQChr05g0131511 Helianthus annuus HOM05D005721 ORTHO05D006758 9.8e-06 56.6 91 35.2


User provided reference genes

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