Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 5.7e-116 421.0 223 100.0
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 4.6e-17 92.4 209 36.8
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 3.3e-15 86.3 134 47.8
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 3.7e-14 82.8 214 36.0
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 3.7e-14 82.8 135 44.4
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 3.7e-14 82.8 206 35.4
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 3.7e-14 82.8 151 43.0
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 4.8e-14 82.4 208 35.1
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 4.8e-14 82.4 188 35.1
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 6.2e-14 82.0 133 44.4
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 8.1e-14 81.6 212 34.9
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 8.1e-14 81.6 208 36.5
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 8.1e-14 81.6 208 37.0
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 1.4e-13 80.9 212 33.5
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 3.1e-13 79.7 131 43.5
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 3.1e-13 79.7 208 35.1
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 3.1e-13 79.7 213 35.2
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 4.0e-13 79.3 129 43.4
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 4.0e-13 79.3 208 36.5
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 5.3e-13 79.0 207 34.3
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 5.3e-13 79.0 209 34.9
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 6.9e-13 78.6 213 31.0
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 9.0e-13 78.2 210 33.8
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 9.0e-13 78.2 210 35.2
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 9.0e-13 78.2 67 62.7
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 9.0e-13 78.2 136 44.1
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.2e-12 77.8 213 30.5
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.2e-12 77.8 67 61.2
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 1.5e-12 77.4 151 38.4
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.5e-12 77.4 214 34.1
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.5e-12 77.4 133 43.6
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 2.0e-12 77.0 83 53.0
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.0e-12 77.0 210 36.2
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.0e-12 77.0 167 36.5
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 2.6e-12 76.6 137 39.4
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 2.6e-12 76.6 139 42.4
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 2.6e-12 76.6 68 57.4
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 3.4e-12 76.3 67 61.2
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 3.4e-12 76.3 77 55.8
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.4e-12 76.3 153 39.9
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.4e-12 76.3 67 61.2
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 4.5e-12 75.9 77 54.5
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 4.5e-12 75.9 210 31.9
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 5.8e-12 75.5 129 45.0
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 5.8e-12 75.5 207 33.8
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 5.8e-12 75.5 132 42.4
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 5.8e-12 75.5 92 48.9
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 7.6e-12 75.1 213 30.0
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.6e-12 75.1 67 58.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 7.6e-12 75.1 130 40.8
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 7.6e-12 75.1 135 38.5
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.0e-11 74.7 131 41.2
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.0e-11 74.7 67 58.2
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.0e-11 74.7 131 42.7
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 1.3e-11 74.3 156 41.7
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 1.3e-11 74.3 67 58.2
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.3e-11 74.3 83 50.6
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 1.3e-11 74.3 83 50.6
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 1.3e-11 74.3 83 50.6
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.3e-11 74.3 79 51.9
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 1.3e-11 74.3 95 47.4
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.3e-11 74.3 129 40.3
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 1.7e-11 73.9 64 62.5
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 2.2e-11 73.6 67 58.2
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 2.2e-11 73.6 96 47.9
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.2e-11 73.6 148 38.5
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 2.2e-11 73.6 210 34.8
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.9e-11 73.2 67 59.7
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 2.9e-11 73.2 67 56.7
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 2.9e-11 73.2 128 43.8
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 3.8e-11 72.8 87 49.4
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 3.8e-11 72.8 128 44.5
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 4.9e-11 72.4 129 44.2
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 6.5e-11 72.0 137 40.1
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 6.5e-11 72.0 135 40.0
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 6.5e-11 72.0 208 32.7
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 6.5e-11 72.0 129 39.5
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 8.4e-11 71.6 67 53.7
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 8.4e-11 71.6 208 32.7
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.1e-10 71.2 134 43.3
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 1.1e-10 71.2 118 44.9
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 1.1e-10 71.2 86 47.7
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.9e-10 70.5 132 38.6
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.9e-10 70.5 131 42.0
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 1.9e-10 70.5 83 50.6
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 2.5e-10 70.1 133 37.6
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 4.2e-10 69.3 145 35.9
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 5.5e-10 68.9 206 35.0
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 7.1e-10 68.6 156 34.6
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 9.3e-10 68.2 129 40.3
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 9.3e-10 68.2 129 39.5
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.6e-09 67.4 131 37.4
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.6e-09 67.4 76 52.6
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 2.7e-09 66.6 129 39.5
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 4.6e-09 65.9 134 40.3
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.9e-08 62.8 88 44.3
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 1.5e-07 60.8 47 63.8
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.1e-06 57.0 43 62.8


User provided reference genes

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