Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 1.1e-87 326.6 162 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 4.1e-55 218.4 162 63.6
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.6e-51 206.5 151 66.9
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.8e-50 203.0 151 66.9
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 6.7e-50 201.1 155 61.9
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 7.2e-44 181.0 161 54.0
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.2e-44 181.0 161 54.0
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.2e-44 181.0 161 54.0
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.2e-44 181.0 161 54.0
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.2e-44 181.0 161 54.0
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 2.1e-43 179.5 161 53.4
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.3e-42 176.0 161 51.6
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.3e-42 176.0 161 51.6
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 3.9e-42 175.3 162 53.1
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 3.9e-42 175.3 161 51.6
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 5.1e-42 174.9 161 52.8
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 6.7e-42 174.5 161 52.8
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.1e-41 173.7 161 52.2
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.1e-41 173.7 161 52.8
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.1e-41 173.7 161 52.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.5e-41 173.3 161 50.9
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 2.5e-41 172.6 161 52.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.5e-41 172.6 161 51.6
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 2.5e-41 172.6 161 50.9
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 3.3e-41 172.2 161 52.2
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 4.3e-41 171.8 161 52.2
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 4.3e-41 171.8 161 52.2
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 4.3e-41 171.8 161 51.6
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 4.3e-41 171.8 161 50.9
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 4.3e-41 171.8 161 52.2
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 5.7e-41 171.4 161 52.2
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 5.7e-41 171.4 161 51.6
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 5.7e-41 171.4 161 52.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 5.7e-41 171.4 161 51.6
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 7.4e-41 171.0 161 50.9
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 7.4e-41 171.0 161 51.6
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 7.4e-41 171.0 161 51.6
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 9.7e-41 170.6 161 50.9
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.3e-40 170.2 162 50.6
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 1.3e-40 170.2 161 51.6
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.7e-40 169.9 161 49.7
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.2e-40 169.5 162 50.6
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 2.2e-40 169.5 161 49.7
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 2.2e-40 169.5 161 50.9
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 3.7e-40 168.7 161 50.3
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 3.7e-40 168.7 161 50.3
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 3.7e-40 168.7 161 50.9
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 3.7e-40 168.7 161 48.4
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 3.7e-40 168.7 161 50.9
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 6.3e-40 167.9 161 51.6
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 6.3e-40 167.9 161 48.4
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 6.3e-40 167.9 161 50.9
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 50.3
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 50.3
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 50.3
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 50.3
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 49.7
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 50.3
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 8.2e-40 167.5 161 49.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.1e-39 167.2 161 49.7
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.1e-39 167.2 160 50.0
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 49.1
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 49.7
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 49.7
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 49.1
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 49.1
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.4e-39 166.8 161 50.3
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 1.8e-39 166.4 161 49.7
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.8e-39 166.4 161 49.7
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.8e-39 166.4 161 47.8
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 2.4e-39 166.0 161 50.3
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 2.4e-39 166.0 161 49.1
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.1e-39 165.6 161 50.3
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.1e-39 165.6 161 49.1
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 3.1e-39 165.6 161 48.4
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.3e-39 164.9 161 49.1
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 5.3e-39 164.9 161 49.7
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 5.3e-39 164.9 161 50.9
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 6.9e-39 164.5 161 48.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 6.9e-39 164.5 161 47.8
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 6.9e-39 164.5 161 47.8
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 9.1e-39 164.1 161 47.8
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 9.1e-39 164.1 161 50.9
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.5e-38 163.3 161 48.4
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.5e-38 163.3 161 49.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 3.4e-38 162.2 156 51.9
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 3.4e-38 162.2 161 49.7
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 4.5e-38 161.8 161 49.7
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 5.9e-38 161.4 171 49.1
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 7.7e-38 161.0 161 49.7
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 7.7e-38 161.0 158 50.0
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.1e-36 157.1 161 49.7
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.4e-36 156.8 161 49.7
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.5e-36 156.0 161 49.1
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.2e-36 155.6 161 47.2
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 4.2e-36 155.2 162 50.0
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 2.7e-35 152.5 161 48.4
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 2.7e-35 152.5 161 48.4
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 4.7e-35 151.8 161 49.1
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.3e-34 149.4 161 47.2
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.3e-34 149.4 161 47.2
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 3.9e-34 148.7 210 40.0
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 5.1e-34 148.3 161 47.2
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 4.4e-33 145.2 149 49.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 4.5e-30 135.2 145 45.5
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.7e-29 133.3 161 44.1
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.5e-29 131.3 116 54.3
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 8.5e-29 131.0 158 44.9
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.5e-28 130.2 158 44.9
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.4e-26 123.6 162 41.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.0e-25 119.8 133 46.6
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.2e-24 116.3 90 58.9
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 3.1e-23 112.5 128 48.4
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.7e-22 109.4 162 36.4
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.5e-22 109.0 162 36.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 3.5e-22 109.0 161 39.8
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 7.7e-14 81.3 100 42.0
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 1.2e-11 73.9 80 46.2
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 2.6e-09 66.2 45 60.0
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 2.6e-09 66.2 45 60.0
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 4.4e-09 65.5 102 39.2
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 1.7e-08 63.5 76 47.4


User provided reference genes

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