Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 0.0e+00 1086.2 544 100.0
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.1e-77 295.0 477 36.9
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 8.8e-70 268.9 470 35.3
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 8.8e-70 268.9 493 34.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 9.7e-69 265.4 478 34.3
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 6.3e-68 262.7 481 33.9
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 8.2e-68 262.3 483 33.3
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.8e-67 261.2 465 34.8
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 9.1e-67 258.8 491 35.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 9.1e-67 258.8 469 34.1
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.2e-66 258.5 468 35.5
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.5e-66 258.1 472 34.7
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.0e-66 257.7 470 34.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.0e-66 257.7 486 34.4
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.0e-66 257.7 500 33.8
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 2.6e-66 257.3 489 34.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.6e-66 257.3 500 33.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 5.9e-66 256.1 469 33.5
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 7.7e-66 255.8 471 34.2
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.0e-65 255.4 470 33.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.0e-65 255.4 470 33.8
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.0e-65 255.4 466 33.5
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.3e-65 255.0 495 33.7
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.7e-65 254.6 482 33.2
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.2e-65 254.2 480 34.0
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.2e-65 254.2 480 34.0
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 6.5e-65 252.7 469 33.7
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 8.5e-65 252.3 476 32.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.1e-64 251.9 470 33.2
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.1e-64 251.9 466 34.1
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.5e-64 251.5 464 33.8
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.5e-64 250.8 476 32.4
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.2e-64 250.4 470 33.4
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 4.2e-64 250.0 499 32.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.2e-64 250.0 471 33.1
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.5e-64 249.6 521 31.7
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 9.4e-64 248.8 478 32.8
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.2e-63 248.4 469 33.9
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.2e-63 248.4 476 32.1
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.1e-63 247.7 485 33.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 2.7e-63 247.3 466 33.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 8.0e-63 245.7 470 33.2
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.3e-62 244.2 475 34.1
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.3e-62 244.2 482 32.0
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.9e-62 243.4 466 33.3
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 3.9e-62 243.4 481 33.5
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 2.6e-61 240.7 481 32.8
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 2.6e-61 240.7 484 32.2
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 3.3e-61 240.4 481 32.2
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.7e-60 238.0 464 33.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.8e-60 237.3 476 32.6
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.8e-59 234.6 505 32.3
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 2.4e-59 234.2 483 32.9
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 3.1e-59 233.8 487 32.6
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 4.1e-59 233.4 467 32.5
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-58 231.9 469 31.1
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 4.5e-58 229.9 479 32.6
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 7.7e-58 229.2 478 31.6
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.0e-57 228.8 466 33.3
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.0e-57 228.8 478 32.4
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.7e-57 228.0 485 32.0
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.2e-57 227.6 231 49.8
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 2.9e-57 227.3 477 32.3
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 3.8e-57 226.9 479 31.5
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 3.8e-57 226.9 479 31.5
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 3.8e-57 226.9 479 31.5
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.8e-57 226.9 479 32.6
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.5e-56 224.9 482 31.1
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 2.5e-56 224.2 482 32.2
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 3.2e-56 223.8 457 31.5
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 5.5e-56 223.0 477 31.2
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.6e-55 220.3 439 32.6
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 3.6e-55 220.3 440 33.0
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.0e-54 217.2 468 31.8
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 4.0e-54 216.9 241 48.5
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 5.2e-54 216.5 476 29.2
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 8.8e-54 215.7 441 32.0
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.2e-53 215.3 489 31.9
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.7e-52 211.5 456 30.5
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.4e-51 208.4 450 31.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.6e-47 194.9 469 32.2
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.0e-46 192.2 477 29.4
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.6e-45 187.6 422 30.6
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.3e-44 185.3 463 28.1
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.9e-41 174.1 481 28.9
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.5e-40 171.8 253 38.3
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 4.9e-36 156.8 186 46.8
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.0e-34 151.4 471 26.1
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 5.9e-34 149.8 472 26.7
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.9e-32 144.8 245 34.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 7.3e-32 142.9 382 26.7
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.0e-30 139.0 177 42.4
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 8.3e-28 129.4 206 38.3
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-26 124.8 138 47.8
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.7e-20 104.0 103 47.6
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.7e-20 104.0 103 47.6
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.6e-15 88.6 297 25.6
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 4.4e-13 80.5 85 47.1
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.2e-12 78.2 87 43.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.6e-09 66.2 63 52.4
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 6.2e-07 60.1 54 48.1
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.8e-06 58.5 83 33.7


User provided reference genes

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