Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 1.3e-290 1002.3 483 100.0
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 2.1e-147 526.6 534 51.1
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 7.9e-147 524.6 532 50.9
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 2.3e-146 523.1 532 51.3
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 3.0e-146 522.7 536 51.1
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 5.1e-146 521.9 532 50.8
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 8.7e-146 521.2 532 50.6
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.5e-145 520.4 526 51.0
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 1.3e-144 517.3 536 50.2
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 1.3e-144 517.3 536 50.4
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 2.1e-144 516.5 535 50.5
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 4.8e-144 515.4 538 50.7
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 1.1e-143 514.2 533 50.5
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.4e-143 513.8 531 49.7
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 1.4e-143 513.8 530 50.4
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 3.1e-143 512.7 535 50.5
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 1.2e-142 510.8 530 50.2
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.2e-142 510.8 533 50.8
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.0e-142 510.0 536 50.4
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 2.6e-142 509.6 537 49.7
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 2.6e-142 509.6 533 50.8
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 4.5e-142 508.8 533 49.2
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 5.8e-142 508.4 535 48.6
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 1.7e-141 506.9 532 50.2
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 2.9e-141 506.1 543 49.2
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 4.9e-141 505.4 531 48.8
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 6.5e-141 505.0 531 49.5
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 8.4e-141 504.6 532 50.0
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 1.9e-140 503.4 537 47.5
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 1.9e-140 503.4 533 50.3
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 2.5e-140 503.1 529 49.9
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 2.5e-140 503.1 536 48.9
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 4.2e-140 502.3 536 48.9
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 5.5e-140 501.9 536 47.9
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 5.5e-140 501.9 530 48.3
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 5.5e-140 501.9 533 50.1
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.6e-139 500.4 536 49.3
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 2.1e-139 500.0 532 49.1
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 2.1e-139 500.0 532 49.1
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 3.5e-139 499.2 534 48.9
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 4.6e-139 498.8 540 47.6
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 7.9e-139 498.0 535 46.9
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 7.9e-139 498.0 533 50.3
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 7.9e-139 498.0 535 47.5
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 7.9e-139 498.0 532 49.4
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 7.9e-139 498.0 535 49.0
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 7.9e-139 498.0 535 49.0
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 1.0e-138 497.7 533 49.2
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 1.0e-138 497.7 536 47.0
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 1.0e-138 497.7 535 47.3
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 1.0e-138 497.7 533 48.8
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 1.0e-138 497.7 532 48.9
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.3e-138 497.3 536 49.1
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 1.3e-138 497.3 536 49.1
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 1.3e-138 497.3 569 47.1
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 1.8e-138 496.9 529 48.4
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 3.0e-138 496.1 540 46.9
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 3.0e-138 496.1 535 47.5
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 3.0e-138 496.1 532 48.7
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 3.9e-138 495.7 526 47.7
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 3.9e-138 495.7 543 48.4
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 5.1e-138 495.4 540 48.5
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 6.7e-138 495.0 533 49.7
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 2.5e-137 493.0 576 46.7
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 3.3e-137 492.7 533 48.2
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 4.3e-137 492.3 535 48.8
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 5.7e-137 491.9 533 48.2
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 5.7e-137 491.9 533 48.0
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 9.7e-137 491.1 537 48.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 9.7e-137 491.1 533 48.2
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 1.3e-136 490.7 532 47.6
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.3e-136 490.7 556 47.8
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 2.2e-136 490.0 536 49.6
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 3.7e-136 489.2 538 47.6
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.8e-135 486.9 537 46.6
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.8e-135 486.9 537 46.6
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.8e-135 486.9 537 46.6
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 6.9e-135 485.0 535 48.6
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 9.0e-135 484.6 555 46.3
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.0e-133 481.1 541 46.8
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 2.2e-133 479.9 535 49.0
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 3.2e-132 476.1 554 46.9
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 5.5e-132 475.3 537 46.0
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 7.2e-132 474.9 598 44.3
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 4.6e-131 472.2 523 47.2
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 6.1e-131 471.9 537 47.3
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 7.9e-131 471.5 533 47.7
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 2.5e-129 466.5 532 47.2
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 1.7e-128 463.8 533 46.7
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 2.2e-128 463.4 518 47.3
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 8.2e-128 461.5 500 48.8
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 1.1e-124 451.1 544 46.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.7e-123 446.4 486 50.0
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 2.0e-121 440.3 686 38.8
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 3.0e-114 416.4 531 44.1
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 1.3e-112 411.0 363 54.0
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 4.1e-103 379.4 443 45.1
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.0e-101 374.8 531 42.4
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.4e-87 327.8 380 45.5
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.5e-84 317.0 296 52.4
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 7.1e-71 272.3 260 49.2
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 2.1e-70 270.8 256 52.0
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 5.8e-57 226.1 519 30.3
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 3.3e-52 210.3 437 34.8
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.2e-49 201.8 236 46.2
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.0e-45 188.7 154 59.7
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 1.3e-24 118.6 204 33.8
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 6.1e-22 109.8 72 75.0
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 6.1e-22 109.8 72 75.0
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.9e-20 104.8 71 62.0
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.1e-18 97.4 72 58.3
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 6.9e-18 96.3 201 36.3
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.7e-16 91.7 71 57.7
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 3.8e-16 90.5 64 57.8
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.2e-07 60.8 53 50.9


User provided reference genes

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