Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 2.9e-44 181.4 87 100.0
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 1.8e-33 145.6 87 75.9
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 4.4e-32 141.0 85 76.5
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 9.8e-32 139.8 87 72.4
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 1.7e-31 139.0 84 75.0
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 3.7e-31 137.9 84 76.2
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.9e-31 137.5 84 75.0
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 6.4e-31 137.1 86 73.3
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 8.3e-31 136.7 83 75.9
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.1e-30 136.3 82 76.8
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 1.4e-30 136.0 83 73.5
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 1.4e-30 136.0 84 72.6
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.4e-30 136.0 83 74.7
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 1.9e-30 135.6 84 72.6
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 2.4e-30 135.2 83 74.7
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 2.4e-30 135.2 83 73.5
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 3.2e-30 134.8 83 72.3
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 3.2e-30 134.8 82 75.6
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 4.1e-30 134.4 84 72.6
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 5.4e-30 134.0 83 73.5
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 5.4e-30 134.0 86 73.3
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 7.0e-30 133.7 87 71.3
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.2e-29 132.9 84 71.4
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 1.6e-29 132.5 85 70.6
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 2.1e-29 132.1 83 73.5
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 2.7e-29 131.7 83 73.5
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 3.5e-29 131.3 83 72.3
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 3.5e-29 131.3 83 73.5
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 3.5e-29 131.3 83 72.3
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 4.6e-29 131.0 87 70.1
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 6.0e-29 130.6 84 72.6
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 7.8e-29 130.2 83 73.5
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.3e-28 129.4 83 73.5
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.3e-28 129.4 83 71.1
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 1.3e-28 129.4 83 69.9
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.7e-28 129.0 83 72.3
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.3e-28 128.6 83 69.9
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.3e-28 128.6 84 69.0
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 2.3e-28 128.6 83 69.9
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 3.0e-28 128.3 83 71.1
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.9e-28 127.9 83 72.3
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 3.9e-28 127.9 83 72.3
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 3.9e-28 127.9 83 68.7
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 3.9e-28 127.9 83 68.7
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.1e-28 127.5 83 72.3
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.1e-28 127.5 83 72.3
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.1e-28 127.5 83 68.7
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 6.6e-28 127.1 83 71.1
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 6.6e-28 127.1 83 72.3
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 8.6e-28 126.7 83 71.1
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 8.6e-28 126.7 83 71.1
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 8.6e-28 126.7 83 69.9
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.1e-27 126.3 83 71.1
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 1.1e-27 126.3 83 69.9
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.5e-27 125.9 83 67.5
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 1.5e-27 125.9 83 71.1
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 1.5e-27 125.9 83 69.9
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 1.9e-27 125.6 83 72.3
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 2.5e-27 125.2 83 67.5
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 3.3e-27 124.8 83 69.9
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 3.3e-27 124.8 83 68.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 4.3e-27 124.4 83 69.9
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 4.3e-27 124.4 83 66.3
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 4.3e-27 124.4 83 67.5
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.6e-27 124.0 84 72.6
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 5.6e-27 124.0 83 68.7
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 7.3e-27 123.6 83 72.3
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 9.5e-27 123.2 83 67.5
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 69.9
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 69.9
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 65.1
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 68.7
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 67.5
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 67.5
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 66.3
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 1.6e-26 122.5 83 69.9
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 2.1e-26 122.1 83 66.3
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 2.1e-26 122.1 89 66.3
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 2.8e-26 121.7 83 69.9
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 2.8e-26 121.7 83 69.9
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 2.8e-26 121.7 83 69.9
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 2.8e-26 121.7 83 69.9
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 3.6e-26 121.3 83 67.5
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 3.6e-26 121.3 83 67.5
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 3.6e-26 121.3 83 63.9
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 4.7e-26 120.9 82 70.7
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 4.7e-26 120.9 83 66.3
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 4.7e-26 120.9 83 67.5
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 6.2e-26 120.6 83 65.1
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 6.2e-26 120.6 83 66.3
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 8.1e-26 120.2 83 68.7
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 8.1e-26 120.2 82 70.7
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 1.1e-25 119.8 83 68.7
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 1.1e-25 119.8 83 68.7
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 1.4e-25 119.4 83 68.7
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 4.0e-25 117.9 83 67.5
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 8.9e-25 116.7 77 67.5
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 8.9e-25 116.7 83 65.1
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.5e-24 115.9 83 63.9
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 4.4e-24 114.4 71 70.4
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 5.8e-24 114.0 76 69.7
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 7.5e-24 113.6 70 74.3
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.3e-23 112.8 77 64.9
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 1.4e-22 109.4 70 70.0
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.4e-22 108.6 83 62.7
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 2.4e-22 108.6 83 62.7
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 2.4e-22 108.6 70 67.1
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 7.1e-22 107.1 70 71.4
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 5.1e-20 100.9 70 65.7
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 8.6e-20 100.1 70 67.1
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 2.8e-18 95.1 70 64.3
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.4e-17 92.8 53 77.4
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 1.4e-17 92.8 53 77.4
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.8e-17 92.4 93 54.8
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 4.0e-17 91.3 51 80.4
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 5.2e-17 90.9 64 65.6
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 8.4e-15 83.6 51 74.5
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 6.6e-12 73.9 70 52.9
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 1.9e-11 72.4 50 72.0
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 8.1e-10 67.0 47 68.1
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.1e-09 65.1 38 73.7


User provided reference genes

Program Settings