Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 1.3e-85 319.7 158 100.0
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 3.7e-29 132.1 126 52.4
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 6.4e-29 131.3 126 53.2
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.8e-28 129.8 127 53.5
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-28 129.4 129 51.9
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.4e-28 129.4 129 51.9
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 4.1e-28 128.6 127 50.4
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 5.4e-28 128.3 127 50.4
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 7.0e-28 127.9 126 53.2
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.6e-27 126.7 126 51.6
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.5e-27 125.6 126 51.6
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 3.5e-27 125.6 130 52.3
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 3.5e-27 125.6 126 53.2
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 4.6e-27 125.2 126 53.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.6e-27 125.2 126 50.8
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 5.9e-27 124.8 126 52.4
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 7.8e-27 124.4 126 51.6
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 7.8e-27 124.4 126 50.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 7.8e-27 124.4 127 50.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 7.8e-27 124.4 129 49.6
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 7.8e-27 124.4 132 51.5
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 52.8
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 52.8
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 52.8
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 52.8
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 52.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.3e-26 123.6 127 49.6
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 1.3e-26 123.6 128 50.0
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.3e-26 123.6 126 50.0
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.3e-26 123.6 126 50.0
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.3e-26 123.6 132 51.5
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.7e-26 123.2 126 50.8
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 1.7e-26 123.2 127 52.0
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 1.7e-26 123.2 126 53.2
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.7e-26 123.2 126 51.6
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.7e-26 123.2 126 50.0
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.7e-26 123.2 132 50.8
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.7e-26 123.2 129 51.2
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.3e-26 122.9 128 50.0
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.3e-26 122.9 128 50.0
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 2.3e-26 122.9 126 50.8
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.3e-26 122.9 128 50.8
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.3e-26 122.9 122 50.8
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 3.0e-26 122.5 130 50.0
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 3.0e-26 122.5 126 50.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.9e-26 122.1 126 50.0
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 3.9e-26 122.1 126 47.6
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 3.9e-26 122.1 122 50.0
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 5.0e-26 121.7 126 48.4
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 6.6e-26 121.3 126 48.4
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 6.6e-26 121.3 128 49.2
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 8.6e-26 120.9 129 49.6
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.1e-25 120.6 126 50.8
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.1e-25 120.6 126 50.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.9e-25 119.8 126 50.8
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.9e-25 119.8 126 49.2
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.9e-25 119.8 127 49.6
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.3e-25 119.0 126 47.6
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 3.3e-25 119.0 129 48.8
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 4.3e-25 118.6 126 48.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 5.6e-25 118.2 126 47.6
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 5.6e-25 118.2 126 48.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 5.6e-25 118.2 126 51.6
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.3e-25 117.9 126 50.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 7.3e-25 117.9 126 46.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 7.3e-25 117.9 126 46.8
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 9.5e-25 117.5 126 49.2
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.2e-24 117.1 126 50.0
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.6e-24 116.7 126 46.8
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.6e-24 116.7 126 46.8
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.6e-24 116.7 126 46.8
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.6e-24 116.7 126 50.8
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 2.1e-24 116.3 126 50.0
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 2.8e-24 115.9 122 46.7
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 4.7e-24 115.2 126 46.8
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 6.2e-24 114.8 126 44.4
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 6.2e-24 114.8 126 46.0
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 6.2e-24 114.8 126 48.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.0e-23 114.0 122 50.0
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.4e-23 113.6 128 48.4
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.3e-23 112.8 129 45.7
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.1e-23 112.5 126 46.8
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.0e-23 112.1 129 45.7
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.2e-23 111.7 126 46.0
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 5.2e-23 111.7 126 46.0
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 8.9e-23 110.9 126 46.8
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.2e-22 110.5 108 51.9
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.2e-22 110.5 126 46.8
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 4.4e-22 108.6 126 44.4
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 9.8e-22 107.5 104 53.8
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.7e-21 106.7 144 43.1
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 2.2e-21 106.3 134 44.8
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.2e-21 106.3 159 40.3
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.1e-20 104.0 129 45.0
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 4.6e-19 98.6 152 38.8
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.7e-18 96.7 147 40.1
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 3.0e-18 95.9 123 44.7
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 5.0e-18 95.1 89 51.7
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.1e-17 94.0 115 46.1
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.5e-17 93.6 115 45.2
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.9e-17 93.2 88 54.5
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 3.3e-17 92.4 89 53.9
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 5.2e-15 85.1 95 46.3
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.9e-13 79.3 143 32.9
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.4e-12 76.3 89 46.1
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 4.1e-12 75.5 99 43.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.2e-11 73.9 86 41.9
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.3e-10 70.5 129 33.3
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.7e-10 70.1 68 52.9
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.9e-09 66.6 141 36.2
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 2.5e-09 66.2 78 46.2
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 7.3e-09 64.7 54 59.3
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.4e-07 60.5 58 51.7
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 6.8e-07 58.2 38 71.1
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 2.6e-06 56.2 38 68.4
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 4.4e-06 55.5 126 33.3
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 9.9e-06 54.3 51 52.9
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 9.9e-06 54.3 59 42.4


User provided reference genes

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