Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 5.2e-69 264.2 131 100.0
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 8.4e-43 177.2 104 83.7
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 1.4e-42 176.4 104 81.7
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 1.4e-42 176.4 104 81.7
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 1.9e-42 176.0 104 82.7
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 3.2e-42 175.3 104 81.7
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 4.2e-42 174.9 104 80.8
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.2e-42 174.9 104 81.7
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 5.4e-42 174.5 104 81.7
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 82.7
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 82.7
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 81.7
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 81.7
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 80.8
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 81.7
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 7.1e-42 174.1 104 79.8
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 9.3e-42 173.7 104 80.8
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 9.3e-42 173.7 104 79.8
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 9.3e-42 173.7 104 80.8
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 9.3e-42 173.7 104 79.8
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.2e-41 173.3 104 81.7
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 1.2e-41 173.3 104 80.8
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 1.2e-41 173.3 104 80.8
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 1.2e-41 173.3 104 79.8
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 1.6e-41 172.9 104 81.7
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.6e-41 172.9 104 81.7
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 1.6e-41 172.9 104 81.7
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 1.6e-41 172.9 104 78.8
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 80.8
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 78.8
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 77.9
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 78.8
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 78.8
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 2.1e-41 172.6 104 79.8
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 2.7e-41 172.2 104 78.8
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 2.7e-41 172.2 104 80.8
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 2.7e-41 172.2 104 78.8
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 2.7e-41 172.2 104 78.8
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 77.9
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 3.5e-41 171.8 108 75.9
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 81.7
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 81.7
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 81.7
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 79.8
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 79.8
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 3.5e-41 171.8 104 79.8
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 77.9
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 79.8
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 4.6e-41 171.4 106 80.2
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 78.8
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 4.6e-41 171.4 104 79.8
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 6.0e-41 171.0 107 77.6
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 6.0e-41 171.0 104 79.8
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 6.0e-41 171.0 106 79.2
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 6.0e-41 171.0 104 80.8
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 6.0e-41 171.0 104 79.8
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 6.0e-41 171.0 104 79.8
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 77.9
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 76.9
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 79.8
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 78.8
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 78.8
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 78.8
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 78.8
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 79.8
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 7.8e-41 170.6 104 80.8
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.0e-40 170.2 104 78.8
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.0e-40 170.2 104 78.8
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 1.0e-40 170.2 104 77.9
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.0e-40 170.2 104 79.8
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 1.0e-40 170.2 104 79.8
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 77.9
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 76.9
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 78.8
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 78.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 79.8
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 1.3e-40 169.9 104 77.9
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 1.7e-40 169.5 104 76.9
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 1.7e-40 169.5 104 78.8
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.7e-40 169.5 104 76.9
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.7e-40 169.5 104 77.9
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 2.3e-40 169.1 104 77.9
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 2.3e-40 169.1 104 77.9
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 2.3e-40 169.1 104 78.8
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 2.3e-40 169.1 104 79.8
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 2.3e-40 169.1 104 79.8
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 3.0e-40 168.7 104 76.0
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 3.0e-40 168.7 104 77.9
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 3.9e-40 168.3 104 76.0
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 3.9e-40 168.3 104 78.8
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 3.9e-40 168.3 104 78.8
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 3.9e-40 168.3 104 79.8
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 5.1e-40 167.9 104 77.9
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 6.6e-40 167.5 104 76.9
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 6.6e-40 167.5 104 76.9
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 8.7e-40 167.2 104 76.9
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 8.7e-40 167.2 104 77.9
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.1e-39 166.8 104 76.9
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 1.9e-39 166.0 104 76.9
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 3.3e-39 165.2 104 76.9
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 3.3e-39 165.2 104 77.9
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 7.3e-39 164.1 104 76.9
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 9.6e-39 163.7 104 76.0
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.6e-38 162.9 104 76.0
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 1.4e-37 159.8 104 76.0
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 1.5e-36 156.4 94 81.9
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 3.4e-36 155.2 104 71.2
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 3.4e-36 155.2 99 76.8
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 8.4e-35 150.6 94 75.5
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 4.6e-33 144.8 107 65.4
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 3.4e-28 128.6 103 57.3
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 4.9e-19 98.2 61 75.4
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.2e-17 93.6 57 75.4


User provided reference genes

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