Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 5.4e-136 487.6 244 100.0
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 8.0e-55 218.0 135 75.6
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 1.0e-54 217.6 164 67.7
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 3.0e-54 216.1 136 74.3
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 4.0e-54 215.7 135 72.6
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 4.0e-54 215.7 135 74.8
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 5.2e-54 215.3 136 72.1
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 5.2e-54 215.3 136 73.5
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 6.7e-54 214.9 136 72.8
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 8.8e-54 214.5 136 70.6
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 1.2e-53 214.2 136 72.1
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.5e-53 213.8 136 72.8
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 2.0e-53 213.4 136 69.9
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 2.0e-53 213.4 136 72.8
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 2.6e-53 213.0 136 69.9
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 2.6e-53 213.0 149 67.1
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 2.6e-53 213.0 135 71.9
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 2.6e-53 213.0 136 70.6
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 3.3e-53 212.6 136 72.8
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 3.3e-53 212.6 136 70.6
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 4.4e-53 212.2 136 72.1
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 5.7e-53 211.8 136 70.6
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 7.5e-53 211.5 136 72.1
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 9.7e-53 211.1 135 69.6
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 9.7e-53 211.1 136 70.6
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 9.7e-53 211.1 135 71.1
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.3e-52 210.7 136 68.4
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.7e-52 210.3 136 69.1
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.7e-52 210.3 136 69.1
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.7e-52 210.3 136 70.6
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 1.7e-52 210.3 135 71.1
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 1.7e-52 210.3 135 71.1
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.7e-52 210.3 136 70.6
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 2.2e-52 209.9 139 70.5
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 2.8e-52 209.5 136 69.9
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 2.8e-52 209.5 135 71.1
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 2.8e-52 209.5 136 69.9
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 3.7e-52 209.1 135 69.6
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 3.7e-52 209.1 135 69.6
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 3.7e-52 209.1 136 70.6
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 3.7e-52 209.1 164 62.8
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 4.8e-52 208.8 136 70.6
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 6.3e-52 208.4 136 69.1
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 6.3e-52 208.4 135 71.1
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 8.2e-52 208.0 190 56.8
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 8.2e-52 208.0 160 65.6
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 8.2e-52 208.0 136 69.1
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 8.2e-52 208.0 136 70.6
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 8.2e-52 208.0 136 68.4
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 8.2e-52 208.0 139 67.6
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 8.2e-52 208.0 136 69.1
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 1.1e-51 207.6 135 71.1
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.1e-51 207.6 135 70.4
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 1.1e-51 207.6 146 65.1
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 1.1e-51 207.6 136 69.9
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 1.4e-51 207.2 136 68.4
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 1.4e-51 207.2 136 71.3
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 1.8e-51 206.8 135 68.9
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 1.8e-51 206.8 136 69.1
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 2.4e-51 206.5 140 68.6
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.4e-51 206.5 135 68.1
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 2.4e-51 206.5 140 67.1
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 2.4e-51 206.5 137 68.6
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.4e-51 206.5 135 68.9
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 2.4e-51 206.5 136 67.6
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 3.1e-51 206.1 135 68.1
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 3.1e-51 206.1 135 68.1
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 3.1e-51 206.1 136 67.6
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 3.1e-51 206.1 133 69.9
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 3.1e-51 206.1 136 67.6
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 3.1e-51 206.1 138 69.6
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 4.1e-51 205.7 135 68.1
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 4.1e-51 205.7 135 68.1
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 4.1e-51 205.7 140 65.7
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 4.1e-51 205.7 133 69.9
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 4.1e-51 205.7 136 67.6
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 5.3e-51 205.3 136 68.4
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 5.3e-51 205.3 136 68.4
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 5.3e-51 205.3 135 70.4
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 5.3e-51 205.3 136 69.9
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 5.3e-51 205.3 129 71.3
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 7.0e-51 204.9 134 68.7
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 7.0e-51 204.9 144 66.0
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 7.0e-51 204.9 135 68.9
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 9.1e-51 204.5 135 67.4
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 9.1e-51 204.5 136 69.1
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 1.2e-50 204.1 136 69.1
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 1.2e-50 204.1 135 66.7
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 1.6e-50 203.8 136 69.1
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.6e-50 203.8 135 66.7
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 1.6e-50 203.8 135 68.1
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 2.0e-50 203.4 136 69.1
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 2.7e-50 203.0 136 68.4
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 3.5e-50 202.6 142 64.1
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 4.5e-50 202.2 157 61.1
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 4.5e-50 202.2 157 61.1
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 4.5e-50 202.2 148 65.5
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 4.5e-50 202.2 161 62.1
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 5.9e-50 201.8 135 67.4
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 5.9e-50 201.8 129 69.8
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 1.7e-49 200.3 135 68.9
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 2.2e-49 199.9 129 69.8
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 3.8e-49 199.1 135 68.9
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 3.8e-49 199.1 135 68.9
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.1e-43 181.0 119 68.9
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 1.8e-38 163.7 96 78.1
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 8.9e-38 161.4 97 76.3
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 1.5e-37 160.6 95 76.8
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.7e-36 157.1 135 54.8
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 5.4e-35 152.1 159 49.7
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 1.2e-34 151.0 124 59.7
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 6.8e-30 135.2 135 50.4
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 2.6e-29 133.3 124 52.4
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 5.8e-29 132.1 165 46.1
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 1.7e-28 130.6 164 44.5
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 3.9e-25 119.4 122 45.1
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 6.6e-25 118.6 86 62.8
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 7.0e-19 98.6 60 71.7
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 5.2e-14 82.4 48 77.1
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 2.6e-13 80.1 48 75.0


User provided reference genes

Program Settings