Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54313 Chara braunii HOM05D004374 ORTHO05D005430 2.8e-166 588.6 305 100.0
Pp3c16_3150 Physcomitrium patens HOM05D004374 ORTHO05D005430 6.1e-20 102.4 272 30.1
Mapoly0001s0311 Marchantia polymorpha HOM05D004374 ORTHO05D005430 3.3e-18 96.7 294 28.2
FvH4_6g31820 Fragaria vesca HOM05D004374 ORTHO05D005430 4.8e-17 92.8 133 38.3
FAN14G1328 Fragaria x ananassa HOM05D004374 ORTHO05D005430 4.8e-17 92.8 133 38.3
AagrBONN_evm.TU.Sc2ySwM_228.3625 Anthoceros agrestis HOM05D004374 ORTHO05D005430 6.3e-17 92.4 132 34.1
RcHm_v2.0_Chr2g0138971 Rosa chinensis HOM05D004374 ORTHO05D005430 1.4e-16 91.3 133 39.1
FAN02G2909 Fragaria x ananassa HOM05D004374 ORTHO05D005430 2.4e-16 90.5 133 36.8
FAN09G4040 Fragaria x ananassa HOM05D004374 ORTHO05D005430 2.4e-16 90.5 133 36.8
GSVIVG01015588001 Vitis vinifera HOM05D004374 ORTHO05D005430 7.0e-16 89.0 139 33.8
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 2.0e-15 87.4 144 34.7
SEGI_33846 Sequoiadendron giganteum HOM05D004374 ORTHO05D005430 2.7e-15 87.0 226 27.0
Cpa.g.sc46.39 Carica papaya HOM05D004374 ORTHO05D005430 3.5e-15 86.7 131 36.6
FAN05G4736 Fragaria x ananassa HOM05D004374 ORTHO05D005430 4.5e-15 86.3 133 36.8
EL10Ac8g18718 Beta vulgaris HOM05D004374 ORTHO05D005430 7.7e-15 85.5 132 34.1
Migut.K00426 Erythranthe guttata HOM05D004374 ORTHO05D005430 1.0e-14 85.1 139 34.5
Glyma.13G159900 Glycine max HOM05D004374 ORTHO05D005430 1.7e-14 84.3 131 34.4
QL02p089838 Quercus lobata HOM05D004374 ORTHO05D005430 1.7e-14 84.3 132 34.8
Hma1.2p1_1220F.1_g268070 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 2.2e-14 84.0 132 36.4
SGA_v2.0_scaffold138G35279 Striga asiatica HOM05D004374 ORTHO05D005430 2.2e-14 84.0 132 35.6
Hma1.2p1_0343F.1_g130960 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 2.9e-14 83.6 132 36.4
CANSAT11G1308 Cannabis sativa HOM05D004374 ORTHO05D005430 3.8e-14 83.2 131 34.4
Carub.0005s1981 Capsella rubella HOM05D004374 ORTHO05D005430 5.0e-14 82.8 131 35.1
Phvul.003G168700 Phaseolus vulgaris HOM05D004374 ORTHO05D005430 6.5e-14 82.4 132 34.1
ATR0307G110 Amborella trichopoda HOM05D004374 ORTHO05D005430 8.5e-14 82.0 131 34.4
arahy.Tifrunner.gnm1.ann1.RD7K84 Arachis hypogaea HOM05D004374 ORTHO05D005430 8.5e-14 82.0 131 34.4
Peaxi162Scf00088g01332 Petunia axillaris HOM05D004374 ORTHO05D005430 8.5e-14 82.0 132 33.3
Zm00001eb030790 Zea mays HOM05D004374 ORTHO05D005430 1.1e-13 81.6 134 36.6
Zm00001eb030830 Zea mays HOM05D004374 ORTHO05D005430 1.1e-13 81.6 134 36.6
Cfa008808 Carpinus fangiana HOM05D004374 ORTHO05D005430 1.5e-13 81.3 133 36.1
Nitab4.5_0005465g0010 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.5e-13 81.3 132 33.3
SMO358G0132 Selaginella moellendorffii HOM05D004374 ORTHO05D005430 1.5e-13 81.3 262 27.9
Ciclev10002076m.g Citrus clementina HOM05D004374 ORTHO05D005430 1.9e-13 80.9 131 34.4
Nitab4.5_0002008g0060 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.9e-13 80.9 141 32.6
SalBow1G4424 Salvia bowleyana HOM05D004374 ORTHO05D005430 1.9e-13 80.9 134 32.8
arahy.Tifrunner.gnm1.ann1.QKGT17 Arachis hypogaea HOM05D004374 ORTHO05D005430 2.5e-13 80.5 131 34.4
Cc06_g08080 Coffea canephora HOM05D004374 ORTHO05D005430 2.5e-13 80.5 132 32.6
MD05G1013300 Malus domestica HOM05D004374 ORTHO05D005430 2.5e-13 80.5 131 32.1
Solyc07g007940.3 Solanum lycopersicum HOM05D004374 ORTHO05D005430 2.5e-13 80.5 132 33.3
Sopen07g003820 Solanum pennellii HOM05D004374 ORTHO05D005430 2.5e-13 80.5 132 33.3
Zm00001eb288690 Zea mays HOM05D004374 ORTHO05D005430 2.5e-13 80.5 134 36.6
Haze_11824 Corylus avellana HOM05D004374 ORTHO05D005430 3.2e-13 80.1 133 36.1
PGR042G2992 Punica granatum HOM05D004374 ORTHO05D005430 3.2e-13 80.1 136 32.4
Sc18g0000370 Simmondsia chinensis HOM05D004374 ORTHO05D005430 4.2e-13 79.7 132 34.1
TAR626G1960 Trochodendron aralioides HOM05D004374 ORTHO05D005430 4.2e-13 79.7 132 34.1
Ciclev10032301m.g Citrus clementina HOM05D004374 ORTHO05D005430 5.5e-13 79.3 131 34.4
Ca_06940_v3 Cicer arietinum L. HOM05D004374 ORTHO05D005430 7.2e-13 79.0 131 35.1
CsaV3_2G003190 Cucumis sativus L. HOM05D002754 ORTHO05D003271 7.2e-13 79.0 141 31.2
Os10g0493800 Oryza sativa ssp. japonica HOM05D004374 ORTHO05D005430 7.2e-13 79.0 132 32.6
MELO3C004466.2 Cucumis melo HOM05D004374 ORTHO05D005430 9.4e-13 78.6 132 31.8
Sed0026824 Sechium edule HOM05D004374 ORTHO05D005430 9.4e-13 78.6 132 31.8
Lalb_Chr13g0301591 Lupinus albus HOM05D004374 ORTHO05D005430 1.6e-12 77.8 131 35.1
Medtr4g115320 Medicago truncatula HOM05D004374 ORTHO05D005430 1.6e-12 77.8 139 32.4
Psat4g038960 Pisum sativum HOM05D004374 ORTHO05D005430 1.6e-12 77.8 132 35.6
VMungo1215G2312 Vigna mungo HOM05D004374 ORTHO05D005430 1.6e-12 77.8 123 36.6
DCAR_017779 Daucus carota HOM05D004374 ORTHO05D005430 2.1e-12 77.4 121 37.2
Dinv41475 Davidia involucrata HOM05D004374 ORTHO05D005430 2.1e-12 77.4 132 34.1
Lj4g0025213 Lotus japonicus HOM05D004374 ORTHO05D005430 2.1e-12 77.4 131 32.1
TWI34G0112 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 2.1e-12 77.4 131 32.1
ClCG11G003340 Citrullus lanatus HOM05D004374 ORTHO05D005430 3.6e-12 76.6 132 31.1
Thecc.09G131900 Theobroma cacao HOM05D004374 ORTHO05D005430 3.6e-12 76.6 132 33.3
Aqoxy4G00722 Aquilegia oxysepala HOM05D004374 ORTHO05D005430 4.7e-12 76.3 132 31.8
Manes.06G047300 Manihot esculenta HOM05D004374 ORTHO05D005430 4.7e-12 76.3 139 30.2
AUR62008844 Chenopodium quinoa HOM05D004374 ORTHO05D005430 6.1e-12 75.9 132 32.6
Prupe.1G493600 Prunus persica HOM05D004374 ORTHO05D005430 6.1e-12 75.9 131 31.3
AUR62011174 Chenopodium quinoa HOM05D004374 ORTHO05D005430 8.0e-12 75.5 131 32.8
Lj7A483G16 Lonicera japonica HOM05D004374 ORTHO05D005430 8.0e-12 75.5 133 33.8
PSO478G4198 Papaver somniferum HOM05D004374 ORTHO05D005430 1.0e-11 75.1 133 33.1
Rhsim01G0061800 Rhododendron simsii HOM05D004374 ORTHO05D005430 1.0e-11 75.1 132 32.6
TPR.G24785 Trifolium pratense HOM05D004374 ORTHO05D005430 1.8e-11 74.3 131 33.6
Thhalv10010555m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 2.3e-11 73.9 137 32.8
HanXRQChr06g0168691 Helianthus annuus HOM05D004374 ORTHO05D005430 2.3e-11 73.9 132 33.3
AUR62025401 Chenopodium quinoa HOM05D004374 ORTHO05D005430 3.0e-11 73.6 132 31.8
Gorai.009G015600 Gossypium raimondii HOM05D004374 ORTHO05D005430 3.0e-11 73.6 131 32.8
Medtr3g113180 Medicago truncatula HOM05D004374 ORTHO05D005430 4.0e-11 73.2 131 35.1
Sp5g09070 Schrenkiella parvula HOM05D004374 ORTHO05D005430 4.0e-11 73.2 131 32.8
THA.LOC104826552 Tarenaya hassleriana HOM05D004374 ORTHO05D005430 4.0e-11 73.2 131 32.8
MSTRG.26430 Avicennia marina HOM05D004374 ORTHO05D005430 5.2e-11 72.8 132 32.6
CiPaw.05G118700 Carya illinoinensis HOM05D004374 ORTHO05D005430 6.8e-11 72.4 131 31.3
Lalb_Chr12g0197301 Lupinus albus HOM05D004374 ORTHO05D005430 6.8e-11 72.4 131 31.3
Potri.006G065800 Populus trichocarpa HOM05D004374 ORTHO05D005430 6.8e-11 72.4 134 32.1
Gohir.D05G015500 Gossypium hirsutum HOM05D004374 ORTHO05D005430 8.8e-11 72.0 131 32.8
Lsat_1_v5_gn_7_43761 Lactuca sativa HOM05D004374 ORTHO05D005430 8.8e-11 72.0 131 29.8
Nitab4.5_0009218g0020 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.2e-10 71.6 132 30.3
Lj3g0009396 Lotus japonicus HOM05D004374 ORTHO05D005430 1.5e-10 71.2 120 33.3
Lj5A680G20 Lonicera japonica HOM05D004374 ORTHO05D005430 2.0e-10 70.9 133 30.8
PSO384G0227 Papaver somniferum HOM05D004374 ORTHO05D005430 2.0e-10 70.9 144 31.2
CAN.G1963.3 Capsicum annuum HOM05D004374 ORTHO05D005430 2.6e-10 70.5 151 28.5
SEGI_36985 Sequoiadendron giganteum HOM05D004374 ORTHO05D005430 3.4e-10 70.1 102 33.3
Eucgr.C01384 Eucalyptus grandis HOM05D004374 ORTHO05D005430 4.4e-10 69.7 114 33.3
Carub.0001s3232 Capsella rubella HOM05D004374 ORTHO05D005430 1.3e-09 68.2 127 32.3
ECA240G2062 Erigeron canadensis HOM05D004374 ORTHO05D005430 2.2e-09 67.4 131 30.5
TAR383G0672 Trochodendron aralioides HOM05D004374 ORTHO05D005430 2.8e-09 67.0 113 35.4
Atru.chr12.84 Acer truncatum HOM05D004374 ORTHO05D005430 4.8e-09 66.2 131 29.0
Lj3g0021552 Lotus japonicus HOM05D004374 ORTHO05D005430 6.3e-09 65.9 111 33.3
Dinv36480 Davidia involucrata HOM05D004374 ORTHO05D005430 8.3e-09 65.5 132 30.3
Nitab4.5_0000245g0220 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.4e-08 64.7 110 31.8
Oeu032455.1 Olea europaea HOM05D004374 ORTHO05D005430 1.4e-08 64.7 101 34.7
CAN.G1315.2 Capsicum annuum HOM05D004374 ORTHO05D005430 1.8e-08 64.3 132 30.3
Nn8g39541 Nelumbo nucifera HOM05D004374 ORTHO05D005430 2.4e-08 63.9 132 28.0
COL.COLO4_35152 Corchorus olitorius HOM05D004374 ORTHO05D005430 4.1e-08 63.2 123 31.7
Aa31LG9G14420 Aethionema arabicum HOM05D004374 ORTHO05D005430 9.1e-08 62.0 152 31.6
vmacro15378 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 9.1e-08 62.0 114 32.5
vmacro07719 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 1.2e-07 61.6 94 35.1
Sabra06G0048000 Salix brachista HOM05D004374 ORTHO05D005430 3.5e-07 60.1 146 28.8
MCO01G198 Micromonas commoda HOM05D004374 ORTHO05D005430 4.5e-07 59.7 134 32.1
MBI04_g39649_MAGBIO Magnolia biondii HOM05D004374 ORTHO05D005430 1.7e-06 57.8 123 34.1
Cre06.g279183 Chlamydomonas reinhardtii HOM05D004374 ORTHO05D144782 8.6e-06 55.5 67 38.8


User provided reference genes

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