Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54045 Chara braunii HOM05D000173 ORTHO05D136885 8.7e-202 706.8 375 100.0
BolC3t13006H Brassica oleracea HOM05D000173 ORTHO05D000316 8.6e-08 62.4 307 20.2
BraA03t09771Z Brassica rapa HOM05D000173 ORTHO05D000316 8.6e-08 62.4 307 20.2
Migut.N03220 Erythranthe guttata HOM05D000173 ORTHO05D004400 8.6e-08 62.4 339 21.5
Lj1g0021264 Lotus japonicus HOM05D000173 ORTHO05D035924 1.1e-07 62.0 307 20.5
C04p69500 Brassica napus HOM05D000173 ORTHO05D033136 1.9e-07 61.2 306 21.2
BolC4t28449H Brassica oleracea HOM05D000173 ORTHO05D000316 1.9e-07 61.2 306 21.2
BcaC02g07264 Brassica carinata HOM05D000173 ORTHO05D000316 2.5e-07 60.8 306 21.6
Cc07_g17400 Coffea canephora HOM05D000173 ORTHO05D000316 5.6e-07 59.7 307 20.2
Glyma.05G188800 Glycine max HOM05D000173 ORTHO05D000316 5.6e-07 59.7 312 21.2
Glyma.08G146500 Glycine max HOM05D000173 ORTHO05D000316 5.6e-07 59.7 312 21.2
SalBow6G7083 Salvia bowleyana HOM05D000173 ORTHO05D000316 9.5e-07 58.9 312 20.5
CAN.G26.40 Capsicum annuum HOM05D000173 ORTHO05D000316 1.2e-06 58.5 312 20.8
Solyc11g065990.2 Solanum lycopersicum HOM05D000173 ORTHO05D000316 1.6e-06 58.2 307 20.5
Sopen11g025710 Solanum pennellii HOM05D000173 ORTHO05D000316 1.6e-06 58.2 307 20.5
EL10Ac1g00482 Beta vulgaris HOM05D000173 ORTHO05D000316 2.1e-06 57.8 312 20.5
Lj4g0021829 Lotus japonicus HOM05D000173 ORTHO05D000316 2.1e-06 57.8 307 20.2
Oeu028498.1 Olea europaea HOM05D000173 ORTHO05D000316 2.1e-06 57.8 307 20.2
Peaxi162Scf00015g01118 Petunia axillaris HOM05D000173 ORTHO05D000316 2.1e-06 57.8 306 20.3
SMO194G0016 Selaginella moellendorffii HOM05D000173 ORTHO05D000316 2.1e-06 57.8 306 19.9
SMO358G0228 Selaginella moellendorffii HOM05D000173 ORTHO05D000316 2.1e-06 57.8 309 20.1
CBR_g53762 Chara braunii HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 19.2
AUR62019117 Chenopodium quinoa HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 20.8
Nitab4.5_0000140g0070 Nicotiana tabacum HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 20.8
Nitab4.5_0002790g0040 Nicotiana tabacum HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 20.8
Oeu002637.1 Olea europaea HOM05D000173 ORTHO05D000316 2.8e-06 57.4 307 19.9
Peaxi162Scf00832g00019 Petunia axillaris HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 20.8
Hund17264 Selenicereus undatus HOM05D000173 ORTHO05D000316 2.8e-06 57.4 312 20.8
unitig_52.g17533 Utricularia gibba HOM05D000173 ORTHO05D000316 2.8e-06 57.4 309 20.4
Ah.05g171560 Amaranthus hybridus HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.5
Ah.16g109010 Amaranthus hybridus HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.5
AT2G42090 Arabidopsis thaliana HOM05D000173 ORTHO05D000316 3.6e-06 57.0 325 21.2
EL10Ac1g00483 Beta vulgaris HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.5
AUR62014374 Chenopodium quinoa HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.5
AUR62019116 Chenopodium quinoa HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.5
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 3.6e-06 57.0 249 22.9
SalBow6G4601 Salvia bowleyana HOM05D000173 ORTHO05D000316 3.6e-06 57.0 312 20.2
Solyc04g071260.3 Solanum lycopersicum HOM05D000173 ORTHO05D000316 3.6e-06 57.0 306 20.6
PGSC0003DMG400008618 Solanum tuberosum HOM05D000173 ORTHO05D023167 3.6e-06 57.0 317 20.2
SGA_v2.0_scaffold25G11180 Striga asiatica HOM05D000173 ORTHO05D000316 3.6e-06 57.0 307 19.9
unitig_62.g23529 Utricularia gibba HOM05D000173 ORTHO05D000316 3.6e-06 57.0 309 20.4
AUR62014375 Chenopodium quinoa HOM05D000173 ORTHO05D000316 4.7e-06 56.6 312 20.8
Ca_16916_v3 Cicer arietinum L. HOM05D000173 ORTHO05D000316 4.7e-06 56.6 307 20.2
Lalb_Chr11g0068281 Lupinus albus HOM05D000173 ORTHO05D000316 4.7e-06 56.6 307 19.9
Medtr3g095530 Medicago truncatula HOM05D000173 ORTHO05D000316 4.7e-06 56.6 307 20.2
Oeu064391.1 Olea europaea HOM05D000173 ORTHO05D000316 4.7e-06 56.6 306 19.9
PGR142G1717 Punica granatum HOM05D000173 ORTHO05D000316 4.7e-06 56.6 306 19.6
SalBow7G2282 Salvia bowleyana HOM05D000173 ORTHO05D359184 4.7e-06 56.6 295 22.7
Solyc05g054480.3 Solanum lycopersicum HOM05D000173 ORTHO05D000316 4.7e-06 56.6 306 20.3
Sopen05g032960 Solanum pennellii HOM05D000173 ORTHO05D000316 4.7e-06 56.6 306 20.3
PGSC0003DMG400008619 Solanum tuberosum HOM05D000173 ORTHO05D023167 4.7e-06 56.6 330 20.3
arahy.Tifrunner.gnm1.ann1.145DEM Arachis hypogaea HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 19.9
arahy.Tifrunner.gnm1.ann1.F72ACS Arachis hypogaea HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 19.9
CANSAT64G1094 Cannabis sativa HOM05D000173 ORTHO05D000316 6.2e-06 56.2 306 20.3
CBR_g24113 Chara braunii HOM05D000173 ORTHO05D000316 6.2e-06 56.2 342 19.9
Cc06_g15890 Coffea canephora HOM05D000173 ORTHO05D000316 6.2e-06 56.2 306 19.6
DCAR_030967 Daucus carota HOM05D000173 ORTHO05D000316 6.2e-06 56.2 312 20.5
Glyma.04G215900 Glycine max HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 19.9
Lalb_Chr12g0203301 Lupinus albus HOM05D000173 ORTHO05D000316 6.2e-06 56.2 312 20.8
Lalb_Chr13g0296441 Lupinus albus HOM05D000173 ORTHO05D000316 6.2e-06 56.2 312 20.8
Nitab4.5_0000032g0130 Nicotiana tabacum HOM05D000173 ORTHO05D000316 6.2e-06 56.2 245 19.6
Nitab4.5_0000065g0060 Nicotiana tabacum HOM05D000173 ORTHO05D000316 6.2e-06 56.2 306 19.6
Nitab4.5_0001719g0030 Nicotiana tabacum HOM05D000173 ORTHO05D000316 6.2e-06 56.2 306 19.6
Oeu037785.1 Olea europaea HOM05D000173 ORTHO05D000316 6.2e-06 56.2 302 19.9
Psat5g063760 Pisum sativum HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 20.2
Sopen04g027220 Solanum pennellii HOM05D000173 ORTHO05D000316 6.2e-06 56.2 306 20.3
TPR.G18711 Trifolium pratense HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 20.2
unitig_899.g15639 Utricularia gibba HOM05D000173 ORTHO05D000316 6.2e-06 56.2 307 19.9
CAN.G327.16 Capsicum annuum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 312 20.5
Ca_00107_v3 Cicer arietinum L. HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Duzib114G0047 Durio zibethinus HOM05D000173 ORTHO05D000316 8.1e-06 55.8 306 19.6
Eucgr.G02932 Eucalyptus grandis HOM05D000173 ORTHO05D000316 8.1e-06 55.8 306 19.3
Glyma.15G050200 Glycine max HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Lj1g0015665 Lotus japonicus HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.7
Lj5g0007012 Lotus japonicus HOM05D000173 ORTHO05D000316 8.1e-06 55.8 312 20.2
Medtr2g008050 Medicago truncatula HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Nitab4.5_0000032g0100 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 306 19.6
Nitab4.5_0002064g0070 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 307 19.5
Nitab4.5_0004790g0020 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 306 19.6
Nitab4.5_0006994g0040 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 312 20.2
Nitab4.5_0009320g0010 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 307 19.5
Oeu064306.1 Olea europaea HOM05D000173 ORTHO05D000316 8.1e-06 55.8 302 20.2
Peaxi162Scf01294g00226 Petunia axillaris HOM05D000173 ORTHO05D000316 8.1e-06 55.8 307 19.5
Phvul.006G209800 Phaseolus vulgaris HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Phvul.006G209900 Phaseolus vulgaris HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Psat1g218960 Pisum sativum HOM05D000173 ORTHO05D000316 8.1e-06 55.8 309 20.1
Hund17263 Selenicereus undatus HOM05D000173 ORTHO05D000316 8.1e-06 55.8 312 20.8
unitig_746.g26890 Utricularia gibba HOM05D000173 ORTHO05D000373 8.1e-06 55.8 307 19.9


User provided reference genes

Program Settings