Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 3.8e-120 434.9 221 100.0
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 7.5e-20 101.7 184 36.4
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.7e-19 100.5 183 36.6
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 1.5e-15 87.4 191 33.0
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.9e-15 87.0 186 34.9
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 7.3e-15 85.1 184 33.2
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 9.5e-15 84.7 191 33.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.2e-14 84.3 192 33.3
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.2e-14 84.3 192 33.9
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.2e-14 84.3 195 33.8
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.2e-14 84.3 192 33.3
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.1e-14 83.6 191 33.0
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 2.1e-14 83.6 187 32.6
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 2.1e-14 83.6 188 34.0
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 2.8e-14 83.2 190 32.1
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.7e-14 82.4 189 32.3
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 6.2e-14 82.0 184 34.8
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 6.2e-14 82.0 195 32.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 6.2e-14 82.0 195 32.3
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 6.2e-14 82.0 183 34.4
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 8.1e-14 81.6 192 32.3
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 8.1e-14 81.6 184 33.2
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.8e-13 80.5 191 32.5
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.8e-13 80.5 191 32.5
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.8e-13 80.5 184 32.1
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 2.3e-13 80.1 202 30.7
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.3e-13 80.1 191 31.9
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 3.1e-13 79.7 187 33.7
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 4.0e-13 79.3 185 32.4
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 4.0e-13 79.3 190 32.1
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 4.0e-13 79.3 185 32.4
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 4.0e-13 79.3 187 32.1
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 4.0e-13 79.3 190 32.6
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 5.2e-13 79.0 190 32.1
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 5.2e-13 79.0 184 32.1
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 6.8e-13 78.6 191 31.4
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 6.8e-13 78.6 191 31.4
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 6.8e-13 78.6 191 31.4
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 8.9e-13 78.2 189 29.6
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 8.9e-13 78.2 191 31.4
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 8.9e-13 78.2 185 31.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.2e-12 77.8 191 31.4
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.2e-12 77.8 191 31.4
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.2e-12 77.8 188 32.4
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.2e-12 77.8 191 31.4
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.5e-12 77.4 186 31.2
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.5e-12 77.4 187 31.0
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 2.0e-12 77.0 189 31.2
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.0e-12 77.0 186 31.2
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 2.6e-12 76.6 187 33.2
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.6e-12 76.6 190 31.6
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.4e-12 76.3 191 30.9
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 9.9e-12 74.7 183 32.2
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.3e-11 74.3 184 30.4
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.3e-11 74.3 190 30.0
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.7e-11 73.9 191 31.4
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 2.9e-11 73.2 184 31.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 2.9e-11 73.2 194 30.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.8e-11 72.8 194 33.0
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 3.8e-11 72.8 184 29.9
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.8e-11 72.8 184 29.9
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 6.4e-11 72.0 184 29.3
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.1e-10 71.2 194 29.9
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.4e-10 70.9 192 30.2
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.4e-10 70.9 198 30.8
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.9e-10 70.5 184 29.3
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.9e-10 70.5 184 29.3
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 3.2e-10 69.7 184 29.3
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 3.2e-10 69.7 184 32.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.6e-09 67.4 184 29.9
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.6e-09 65.9 197 27.9
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.0e-09 65.5 192 30.2
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.3e-08 64.3 194 28.9
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.1e-07 61.2 188 29.8
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.5e-07 60.1 195 29.7
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 3.3e-07 59.7 105 36.2
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 8.1e-06 55.1 189 27.0


User provided reference genes

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