Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52370 Chara braunii HOM05D002645 ORTHO05D002741 0.0e+00 2427.5 1670 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2734 Anthoceros agrestis HOM05D000163 ORTHO05D000219 6.7e-12 78.2 180 35.0
ATR0824G127 Amborella trichopoda HOM05D002645 ORTHO05D002741 1.7e-10 73.6 157 32.5
AagrBONN_evm.TU.Sc2ySwM_362.1267 Anthoceros agrestis HOM05D005660 ORTHO05D006954 1.7e-10 73.6 153 31.4
SEGI_40774 Sequoiadendron giganteum HOM05D005660 ORTHO05D006954 3.7e-10 72.4 159 30.2
ATR0057G046 Amborella trichopoda HOM05D000163 ORTHO05D000219 6.3e-10 71.6 158 29.7
Os10g0437500 Oryza sativa ssp. japonica HOM05D000483 ORTHO05D000158 7.0e-09 68.2 165 31.5
Nn1g07769 Nelumbo nucifera HOM05D002645 ORTHO05D002741 4.5e-08 65.5 152 28.3
Medtr4g125930 Medicago truncatula HOM05D000163 ORTHO05D000219 1.3e-07 63.9 162 28.4
GSVIVG01015162001 Vitis vinifera HOM05D000163 ORTHO05D000219 1.3e-07 63.9 169 29.0
Potri.006G198200 Populus trichocarpa HOM05D000483 ORTHO05D000158 1.7e-07 63.5 162 29.6
SEGI_07906 Sequoiadendron giganteum HOM05D000163 ORTHO05D000219 1.7e-07 63.5 150 29.3
CAN.G338.23 Capsicum annuum HOM05D002645 ORTHO05D002741 2.2e-07 63.2 170 27.6
Nn3g16713 Nelumbo nucifera HOM05D002645 ORTHO05D002741 2.2e-07 63.2 162 26.5
Nitab4.5_0001793g0110 Nicotiana tabacum HOM05D002645 ORTHO05D002741 2.2e-07 63.2 176 28.4
SEGI_11517 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 2.2e-07 63.2 139 28.1
TPR.G9435 Trifolium pratense HOM05D000163 ORTHO05D000219 2.2e-07 63.2 162 28.4
MSTRG.11489 Avicennia marina HOM05D002645 ORTHO05D002741 2.9e-07 62.8 150 30.7
Nitab4.5_0001683g0040 Nicotiana tabacum HOM05D002645 ORTHO05D002741 3.8e-07 62.4 163 28.2
Nitab4.5_0003703g0030 Nicotiana tabacum HOM05D002645 ORTHO05D002741 3.8e-07 62.4 176 27.8
Psat0s473g0040 Pisum sativum HOM05D002645 ORTHO05D002741 3.8e-07 62.4 159 27.7
SEGI_31692 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 5.0e-07 62.0 139 28.1
Solyc03g112330.3 Solanum lycopersicum HOM05D002645 ORTHO05D002741 5.0e-07 62.0 135 28.1
Haze_07000 Corylus avellana HOM05D002645 ORTHO05D002741 8.5e-07 61.2 161 26.1
ECA246G4176 Erigeron canadensis HOM05D002645 ORTHO05D002741 8.5e-07 61.2 158 27.2
Sopen03g031430 Solanum pennellii HOM05D002645 ORTHO05D002741 8.5e-07 61.2 135 28.1
Cc06_g11690 Coffea canephora HOM05D000163 ORTHO05D000219 1.1e-06 60.8 145 30.3
HanXRQChr05g0155321 Helianthus annuus HOM05D002645 ORTHO05D002741 1.1e-06 60.8 153 26.8
MBI15_g36663_MAGBIO Magnolia biondii HOM05D002645 ORTHO05D002741 1.1e-06 60.8 163 24.5
Zm00001eb385250 Zea mays HOM05D000163 ORTHO05D000219 1.1e-06 60.8 181 29.3
PGSC0003DMG400018183 Solanum tuberosum HOM05D002645 ORTHO05D002741 1.5e-06 60.5 135 27.4
Lsat_1_v5_gn_5_14161 Lactuca sativa HOM05D002645 ORTHO05D002741 3.2e-06 59.3 137 24.1
Nn1g07770 Nelumbo nucifera HOM05D002645 ORTHO05D002741 5.5e-06 58.5 152 24.3
VMungo1215G0449 Vigna mungo HOM05D000163 ORTHO05D000219 5.5e-06 58.5 163 29.4
CiPaw.07G185800 Carya illinoinensis HOM05D000163 ORTHO05D000219 7.2e-06 58.2 155 29.7
Psat5g228440 Pisum sativum HOM05D000163 ORTHO05D000219 7.2e-06 58.2 119 32.8
CSS0025007 Camellia sinensis var. sinensis HOM05D002645 ORTHO05D002741 9.4e-06 57.8 136 27.9
Cfa019206 Carpinus fangiana HOM05D002645 ORTHO05D002741 9.4e-06 57.8 159 28.3
Gohir.A05G001000 Gossypium hirsutum HOM05D000163 ORTHO05D000219 9.4e-06 57.8 153 26.8


User provided reference genes

Program Settings