Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52260 Chara braunii HOM05D005126 ORTHO05D006169 0.0e+00 6585.7 3629 100.0
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 1.1e-46 194.9 940 27.8
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 1.8e-46 194.1 940 27.8
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 2.5e-43 183.7 990 26.4
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 2.5e-43 183.7 882 27.9
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 3.2e-43 183.3 986 27.5
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.2e-42 181.4 984 26.2
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 3.6e-42 179.9 981 27.6
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 1.0e-41 178.3 981 27.4
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 2.3e-41 177.2 975 26.6
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 4.0e-41 176.4 966 26.9
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 1.2e-40 174.9 966 26.8
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 6.3e-39 169.1 986 26.1
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 1.8e-38 167.5 997 26.4
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 7.0e-38 165.6 997 26.4
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 7.0e-38 165.6 1089 26.2
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 1.0e-36 161.8 974 25.4
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 1.7e-36 161.0 1047 24.3
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 2.2e-36 160.6 892 27.2
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 5.0e-36 159.5 1080 25.4
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 6.5e-36 159.1 1244 24.1
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 1.1e-35 158.3 1204 24.7
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 2.5e-35 157.1 1032 24.3
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 2.5e-35 157.1 1033 24.7
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 3.2e-35 156.8 1031 24.7
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 5.5e-35 156.0 906 25.6
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 9.4e-35 155.2 1007 25.7
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 1.2e-34 154.8 1076 24.4
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 6.1e-34 152.5 895 24.8
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 1.0e-33 151.8 938 26.3
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 1.4e-33 151.4 1031 24.8
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 2.3e-33 150.6 1032 24.7
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 3.0e-33 150.2 1037 24.9
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 1.5e-32 147.9 1122 23.6
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 1.5e-32 147.9 992 25.0
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 1.5e-32 147.9 937 24.2
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 2.0e-32 147.5 963 25.5
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 2.8e-31 143.7 908 26.0
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 4.8e-31 142.9 935 25.0
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 6.3e-31 142.5 892 24.6
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 1.4e-30 141.4 808 26.1
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 1.4e-30 141.4 1164 24.7
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 4.1e-30 139.8 1025 25.7
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 7.0e-30 139.0 1141 24.5
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 9.1e-30 138.7 1146 25.3
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 1.2e-29 138.3 1273 24.0
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 3.5e-29 136.7 993 24.2
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 5.9e-29 136.0 1121 24.1
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 7.7e-29 135.6 966 25.1
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 1.7e-28 134.4 906 25.1
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 3.8e-28 133.3 911 25.2
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 1.5e-27 131.3 907 25.8
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 1.5e-27 131.3 801 24.2
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 7.2e-27 129.0 1063 23.0
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 7.2e-27 129.0 1040 24.0
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 7.2e-27 129.0 1083 23.0
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 2.8e-26 127.1 1055 25.2
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 6.1e-26 125.9 850 25.5
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 1.4e-25 124.8 887 24.5
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 3.0e-25 123.6 1038 23.6
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 3.0e-25 123.6 757 25.1
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 2.0e-24 120.9 960 22.9
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 2.0e-24 120.9 1177 24.8
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 2.0e-24 120.9 997 24.6
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 2.6e-24 120.6 793 25.5
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 3.4e-24 120.2 1001 24.2
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 4.4e-24 119.8 1097 23.4
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 5.7e-24 119.4 904 25.3
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 7.5e-24 119.0 954 25.7
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 1.7e-23 117.9 891 24.7
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 2.8e-23 117.1 989 22.9
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 2.8e-23 117.1 847 24.3
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 3.7e-23 116.7 774 24.5
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 6.3e-23 115.9 980 24.4
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 6.3e-23 115.9 885 24.5
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 8.3e-23 115.5 866 24.8
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 1.1e-22 115.2 977 23.4
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 1.4e-22 114.8 1116 22.7
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 1.8e-22 114.4 1088 22.1
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 3.1e-22 113.6 1081 22.0
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 5.4e-22 112.8 1177 23.3
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 2.7e-21 110.5 882 23.0
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 3.5e-21 110.2 1096 21.7
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 3.5e-21 110.2 843 24.4
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 3.5e-21 110.2 1121 22.2
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 7.8e-21 109.0 1076 23.1
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 1.7e-20 107.8 1024 23.6
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 1.7e-20 107.8 1003 23.4
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 2.9e-20 107.1 935 23.3
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 6.6e-20 105.9 838 24.3
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 8.6e-20 105.5 746 23.1
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 1.1e-19 105.1 1264 22.8
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 1.9e-19 104.4 1145 22.8
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 3.3e-19 103.6 1064 24.0
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 3.3e-19 103.6 1259 23.4
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 2.8e-18 100.5 612 25.5
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 3.6e-18 100.1 1312 22.1
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 3.6e-18 100.1 858 23.1
Atru.chr10.2052 Acer truncatum HOM05D005126 ORTHO05D006169 1.4e-17 98.2 358 28.8
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 5.2e-17 96.3 1237 23.0
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 1.5e-16 94.7 934 23.0
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 2.6e-16 94.0 867 24.9
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 4.4e-16 93.2 898 23.7
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 5.8e-16 92.8 897 23.5
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 9.8e-16 92.0 990 22.4
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 6.4e-15 89.4 967 23.0
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 2.7e-13 84.0 1071 22.7
TAR626G0500 Trochodendron aralioides HOM05D005126 ORTHO05D006169 4.6e-13 83.2 456 25.2
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 1.0e-12 82.0 950 21.9
BcaB04g20360 Brassica carinata HOM05D005126 ORTHO05D006169 2.3e-12 80.9 448 27.0
GSVIVG01002717001 Vitis vinifera HOM05D005126 ORTHO05D006169 1.1e-11 78.6 255 31.0
CSS0026607 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 2.5e-11 77.4 346 28.3
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 5.6e-11 76.3 776 21.5
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 2.1e-10 74.3 1085 23.3
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 3.6e-10 73.6 1231 21.7
Oeu030881.1 Olea europaea HOM05D005126 ORTHO05D006169 6.2e-10 72.8 319 29.5
CDE12G0914 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.5e-08 68.2 575 21.9
CDE12G0347 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 9.8e-08 65.5 618 24.4
BcaB04g20358 Brassica carinata HOM05D005126 ORTHO05D006169 5.4e-06 59.7 312 26.6


User provided reference genes

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