Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 0.0e+00 2640.5 1362 100.0
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.5e-30 139.8 623 26.3
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.2e-22 113.6 626 23.5
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.5e-22 113.2 626 23.5
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 4.5e-22 111.7 623 23.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.5e-22 111.7 625 24.3
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.2e-21 109.4 626 23.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 2.9e-21 109.0 615 22.9
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 3.8e-21 108.6 623 23.1
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.1e-20 107.1 615 22.6
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.1e-20 107.1 615 22.9
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.1e-20 107.1 610 22.6
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.9e-20 106.3 626 22.8
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.2e-20 105.5 615 22.8
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 7.2e-20 104.4 647 21.8
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 9.4e-20 104.0 616 23.9
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.2e-19 103.6 648 22.1
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.6e-19 103.2 638 23.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.1e-19 102.8 643 23.3
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 4.6e-19 101.7 615 22.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 6.1e-19 101.3 639 22.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 6.1e-19 101.3 638 22.3
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 6.1e-19 101.3 608 22.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 7.9e-19 100.9 614 22.6
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.9e-19 100.9 647 22.4
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 7.9e-19 100.9 609 22.7
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 7.9e-19 100.9 645 23.6
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.4e-18 100.1 614 23.0
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 3.0e-18 99.0 616 20.8
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.9e-18 98.6 609 22.0
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.9e-18 98.6 644 23.4
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.1e-17 97.1 619 23.1
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.1e-17 97.1 626 23.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.5e-17 96.7 492 24.0
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.0e-17 96.3 626 22.4
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 2.6e-17 95.9 643 21.8
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.6e-17 95.9 645 21.7
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.6e-17 95.9 629 21.6
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 3.3e-17 95.5 613 22.2
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 5.7e-17 94.7 526 22.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 9.7e-17 94.0 615 20.8
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.8e-16 91.7 526 21.9
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 1.4e-15 90.1 508 22.6
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.1e-15 89.0 639 19.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.1e-15 89.0 639 19.9
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.1e-15 89.0 639 19.9
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 4.1e-15 88.6 522 22.0
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 4.1e-15 88.6 628 22.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 5.3e-15 88.2 635 22.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.5e-14 86.7 308 26.0
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 1.5e-14 86.7 308 26.0
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.5e-14 86.7 525 22.5
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.5e-14 86.7 638 22.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.0e-14 86.3 526 22.4
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.6e-14 85.9 283 26.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.4e-14 85.5 483 22.8
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 3.4e-14 85.5 308 26.0
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 4.5e-14 85.1 304 25.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.9e-14 84.7 483 22.8
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 1.0e-13 84.0 554 21.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.3e-13 83.6 470 21.9
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.3e-13 83.6 308 25.0
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 2.9e-13 82.4 560 22.7
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.8e-13 82.0 309 25.2
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 5.0e-13 81.6 470 22.1
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.5e-13 81.3 308 24.7
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 1.4e-12 80.1 472 21.6
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.4e-12 80.1 309 24.6
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.4e-12 80.1 308 24.0
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.4e-12 80.1 308 24.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 2.5e-12 79.3 488 21.1
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 7.2e-12 77.8 309 24.6
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 7.2e-12 77.8 454 22.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.6e-11 76.6 309 23.9
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.7e-11 75.9 218 26.1
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.1e-11 74.7 460 20.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.0e-10 73.9 235 26.4
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.4e-10 73.6 301 24.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.8e-10 73.2 472 19.9
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 2.3e-10 72.8 459 20.7
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.5e-09 70.1 372 23.4
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.5e-09 70.1 265 29.8
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.0e-09 69.7 237 24.5
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 3.3e-09 68.9 395 21.3
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 7.4e-09 67.8 215 27.0
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-08 67.0 153 26.1
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.7e-08 66.6 163 24.5
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 8.2e-08 64.3 233 26.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 1.4e-07 63.5 291 23.7
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.8e-07 63.2 256 27.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 4.1e-07 62.0 277 26.7
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 7.0e-07 61.2 284 26.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 3.5e-06 58.9 218 26.1
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 5.9e-06 58.2 228 27.6
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.9e-06 58.2 222 28.4


User provided reference genes

Program Settings