Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 7.9e-124 447.2 239 100.0
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 4.6e-31 139.0 224 39.7
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.3e-30 137.5 204 39.7
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 4.6e-23 112.5 222 34.7
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 4.8e-20 102.4 225 34.2
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 7.6e-18 95.1 204 34.3
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 2.9e-17 93.2 206 31.6
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 1.9e-16 90.5 205 34.1
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 1.6e-15 87.4 191 34.6
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 3.5e-15 86.3 128 38.3
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 6.0e-15 85.5 115 41.7
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 6.0e-15 85.5 192 31.8
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 7.9e-15 85.1 191 33.0
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.0e-14 84.7 128 37.5
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 3.0e-14 83.2 120 43.3
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 3.9e-14 82.8 120 42.5
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 6.7e-14 82.0 119 42.9
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 6.7e-14 82.0 120 42.5
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 8.7e-14 81.6 199 33.7
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 8.7e-14 81.6 113 41.6
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 8.7e-14 81.6 120 44.2
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 1.1e-13 81.3 115 39.1
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.5e-13 80.9 203 32.0
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.9e-13 80.5 116 38.8
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.9e-13 80.5 197 32.0
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 2.5e-13 80.1 116 40.5
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 2.5e-13 80.1 118 39.8
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 2.5e-13 80.1 120 40.0
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 2.5e-13 80.1 116 39.7
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 3.3e-13 79.7 194 32.5
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 4.3e-13 79.3 198 31.8
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.3e-13 79.3 122 39.3
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 5.7e-13 79.0 129 38.0
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 5.7e-13 79.0 129 37.2
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 7.4e-13 78.6 129 38.0
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 7.4e-13 78.6 117 37.6
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 7.4e-13 78.6 129 38.0
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 7.4e-13 78.6 116 37.9
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.3e-12 77.8 121 41.3
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.6e-12 77.4 115 40.9
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 2.2e-12 77.0 200 29.5
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 2.2e-12 77.0 117 41.0
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 2.2e-12 77.0 120 39.2
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.2e-12 77.0 121 40.5
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.8e-12 76.6 108 42.6
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 2.8e-12 76.6 201 32.3
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.8e-12 76.6 117 40.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 3.7e-12 76.3 211 34.1
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 3.7e-12 76.3 200 30.0
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 3.7e-12 76.3 129 36.4
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 3.7e-12 76.3 116 37.1
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 4.8e-12 75.9 128 35.9
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 4.8e-12 75.9 125 38.4
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 4.8e-12 75.9 230 29.1
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 6.3e-12 75.5 117 40.2
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 6.3e-12 75.5 116 36.2
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.3e-12 75.5 116 36.2
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 8.2e-12 75.1 116 36.2
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 1.1e-11 74.7 201 30.3
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.4e-11 74.3 116 38.8
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 1.4e-11 74.3 121 39.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 1.8e-11 73.9 120 37.5
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.8e-11 73.9 205 32.7
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 1.8e-11 73.9 114 37.7
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.4e-11 73.6 115 41.7
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 2.4e-11 73.6 109 42.2
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 2.4e-11 73.6 109 42.2
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 2.4e-11 73.6 126 35.7
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.4e-11 73.6 113 36.3
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 3.1e-11 73.2 200 31.0
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.1e-11 73.2 125 34.4
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 4.1e-11 72.8 200 31.0
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 4.1e-11 72.8 113 36.3
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 5.3e-11 72.4 192 33.3
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 5.3e-11 72.4 115 36.5
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 5.3e-11 72.4 113 35.4
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 5.3e-11 72.4 119 40.3
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 9.0e-11 71.6 120 38.3
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.2e-10 71.2 110 41.8
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 1.2e-10 71.2 126 34.9
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 1.5e-10 70.9 104 43.3
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.5e-10 70.9 121 42.1
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 2.0e-10 70.5 104 42.3
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 2.0e-10 70.5 110 40.0
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 2.0e-10 70.5 104 42.3
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 2.0e-10 70.5 111 39.6
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.6e-10 70.1 115 38.3
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.6e-10 70.1 115 38.3
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 2.6e-10 70.1 110 40.0
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 2.6e-10 70.1 114 35.1
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 4.5e-10 69.3 104 42.3
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.5e-10 69.3 82 46.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 5.9e-10 68.9 113 34.5
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 7.7e-10 68.6 115 40.0
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 7.7e-10 68.6 115 35.7
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 7.7e-10 68.6 110 39.1
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 1.0e-09 68.2 113 38.1
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.3e-09 67.8 116 37.1
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 1.7e-09 67.4 104 37.5
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 2.2e-09 67.0 110 38.2
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 3.8e-09 66.2 99 39.4
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 5.0e-09 65.9 111 39.6
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 5.0e-09 65.9 118 33.9
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 5.0e-09 65.9 105 38.1
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 8.5e-09 65.1 82 45.1
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 1.1e-08 64.7 111 38.7
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.4e-08 64.3 105 42.9
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 7.2e-08 62.0 124 32.3
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.1e-07 60.5 91 41.8
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 2.7e-07 60.1 94 38.3
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.6e-07 59.7 149 29.5
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 3.6e-07 59.7 102 37.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 7.9e-07 58.5 168 30.4


User provided reference genes

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