Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 5.0e-73 277.7 144 100.0
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.9e-24 116.3 118 55.1
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 4.3e-24 115.2 124 53.2
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 1.2e-23 113.6 121 52.9
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 2.8e-23 112.5 118 53.4
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.8e-23 112.5 126 50.0
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.8e-23 112.5 116 50.9
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 3.6e-23 112.1 117 52.1
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 6.2e-23 111.3 119 51.3
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 8.1e-23 110.9 118 51.7
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-22 110.5 117 51.3
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.1e-22 110.5 120 53.3
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 1.8e-22 109.8 117 51.3
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.8e-22 109.8 117 50.4
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.8e-22 109.8 144 45.1
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.4e-22 109.4 117 49.6
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.4e-22 109.4 118 50.0
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 2.4e-22 109.4 118 50.0
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 2.4e-22 109.4 118 50.0
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.4e-22 109.4 118 50.0
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 2.4e-22 109.4 117 52.1
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 3.1e-22 109.0 128 50.0
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 3.1e-22 109.0 123 48.0
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.1e-22 109.0 120 50.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 4.0e-22 108.6 118 50.8
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 4.0e-22 108.6 119 50.4
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 5.2e-22 108.2 117 50.4
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 6.9e-22 107.8 117 49.6
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 6.9e-22 107.8 117 50.4
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 6.9e-22 107.8 118 50.0
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 6.9e-22 107.8 118 52.5
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 9.0e-22 107.5 117 51.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 9.0e-22 107.5 120 50.8
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.2e-21 107.1 118 47.5
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.2e-21 107.1 132 44.7
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.5e-21 106.7 126 46.8
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 1.5e-21 106.7 117 49.6
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.5e-21 106.7 118 49.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.5e-21 106.7 117 49.6
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 2.0e-21 106.3 117 50.4
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.0e-21 106.3 120 49.2
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.0e-21 106.3 116 50.0
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 2.6e-21 105.9 130 45.4
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.6e-21 105.9 130 48.5
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 2.6e-21 105.9 119 50.4
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 2.6e-21 105.9 117 49.6
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.6e-21 105.9 116 50.0
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.6e-21 105.9 116 50.0
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.6e-21 105.9 116 50.0
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 2.6e-21 105.9 146 42.5
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 3.4e-21 105.5 120 47.5
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.4e-21 105.1 126 47.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 4.4e-21 105.1 117 49.6
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 5.8e-21 104.8 122 48.4
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 5.8e-21 104.8 126 46.8
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 5.8e-21 104.8 117 53.0
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 5.8e-21 104.8 116 49.1
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 5.8e-21 104.8 120 47.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 7.6e-21 104.4 134 47.8
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 9.9e-21 104.0 117 52.1
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 9.9e-21 104.0 120 47.5
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 1.3e-20 103.6 120 47.5
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.3e-20 103.6 121 45.5
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.3e-20 103.6 118 47.5
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.2e-20 102.8 118 47.5
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.9e-20 102.4 110 52.7
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 3.8e-20 102.1 118 47.5
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 4.9e-20 101.7 119 46.2
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 4.9e-20 101.7 110 50.9
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 6.4e-20 101.3 127 46.5
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 6.4e-20 101.3 123 44.7
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 6.4e-20 101.3 116 47.4
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 6.4e-20 101.3 119 46.2
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 6.4e-20 101.3 116 47.4
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 8.4e-20 100.9 118 50.0
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 8.4e-20 100.9 126 44.4
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 8.4e-20 100.9 137 43.8
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.1e-19 100.5 122 46.7
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.1e-19 100.5 138 42.0
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.4e-19 100.1 116 48.3
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.4e-19 100.1 127 44.1
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.4e-19 100.1 120 44.2
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.4e-19 100.1 118 48.3
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.4e-19 100.1 126 46.0
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 1.4e-19 100.1 117 45.3
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.9e-19 99.8 116 47.4
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 2.4e-19 99.4 119 44.5
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 3.2e-19 99.0 124 41.1
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 3.2e-19 99.0 111 48.6
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 4.2e-19 98.6 118 45.8
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 4.2e-19 98.6 124 45.2
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 7.1e-19 97.8 118 47.5
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 9.3e-19 97.4 112 44.6
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 9.3e-19 97.4 121 44.6
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.2e-18 97.1 118 46.6
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 2.1e-18 96.3 110 48.2
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 2.7e-18 95.9 120 41.7
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.7e-18 95.9 120 42.5
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.7e-18 95.9 129 43.4
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.0e-17 94.0 118 44.1
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 2.3e-17 92.8 113 47.8
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 3.9e-17 92.0 117 46.2
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 5.1e-17 91.7 117 46.2
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.1e-16 90.5 117 45.3
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.1e-16 90.5 117 45.3
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.5e-16 90.1 135 42.2
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.9e-16 89.7 81 59.3
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 2.5e-16 89.4 128 41.4
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.3e-16 88.6 117 44.4
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 3.6e-15 85.5 117 42.7
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 4.8e-15 85.1 107 45.8
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 1.8e-14 83.2 114 43.9
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.4e-14 82.8 116 42.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 9.0e-14 80.9 89 48.3
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.2e-11 72.4 90 46.7
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 9.3e-11 70.9 106 39.6
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.7e-10 69.3 106 38.7
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 3.3e-08 62.4 54 51.9
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 2.1e-07 59.7 80 43.8


User provided reference genes

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